BLASTX nr result

ID: Cheilocostus21_contig00029853 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00029853
         (784 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009418023.1| PREDICTED: probable inactive ATP-dependent z...   147   7e-37
ref|XP_008811189.1| PREDICTED: probable inactive ATP-dependent z...    59   3e-06

>ref|XP_009418023.1| PREDICTED: probable inactive ATP-dependent zinc metalloprotease
           FTSHI 3, chloroplastic [Musa acuminata subsp.
           malaccensis]
 ref|XP_009418024.1| PREDICTED: probable inactive ATP-dependent zinc metalloprotease
           FTSHI 3, chloroplastic [Musa acuminata subsp.
           malaccensis]
          Length = 615

 Score =  147 bits (371), Expect = 7e-37
 Identities = 75/158 (47%), Positives = 99/158 (62%)
 Frame = +1

Query: 310 MSPFTLVLTNGVFRSHHSASNWPKMFSHRRRLGMQVKRLSSLEESYWDLAXXXXXXXXXX 489
           MSPF+LV T+GVF  HHS+SNWP++FSHRRRL +Q  ++ SLEE +WDL           
Sbjct: 1   MSPFSLVSTHGVFSPHHSSSNWPRLFSHRRRLSLQEGKILSLEERHWDLTSSSSLCCRNS 60

Query: 490 WILALRGSSRSLWLFSKFSKMTFAKFDESSKGRHTHLSVVGKEXXXXXXXXXXXXXXXXX 669
             L+L GSSR   L SK +++ FAK D SS  +HTH  + GK                  
Sbjct: 61  RCLSLWGSSRRFRLLSKCNRIVFAKIDRSSNEKHTHFGIRGKPRSRRRFSLRLRPRLRLL 120

Query: 670 XXXVKRLSVPKLIENARTILHKNSKKIVISAWFFVALG 783
              ++RLSV +L+ENART+L +NSKK+++SAWF VALG
Sbjct: 121 SYRLRRLSVQRLVENARTVLLRNSKKLMLSAWFSVALG 158


>ref|XP_008811189.1| PREDICTED: probable inactive ATP-dependent zinc metalloprotease
           FTSHI 3, chloroplastic [Phoenix dactylifera]
 ref|XP_008811191.1| PREDICTED: probable inactive ATP-dependent zinc metalloprotease
           FTSHI 3, chloroplastic [Phoenix dactylifera]
 ref|XP_008811192.1| PREDICTED: probable inactive ATP-dependent zinc metalloprotease
           FTSHI 3, chloroplastic [Phoenix dactylifera]
          Length = 622

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 2/159 (1%)
 Frame = +1

Query: 310 MSPFTLVLTNGVFRSHH-SASNWPKM-FSHRRRLGMQVKRLSSLEESYWDLAXXXXXXXX 483
           M P +L+  NG  R +  S  + P + +S+  R  ++V +L  L   + DL+        
Sbjct: 1   MGPISLIAINGAMRPYSCSLKDQPMLLYSNGSRFRVRVGKLLPLGMKHRDLSSSYSLSCF 60

Query: 484 XXWILALRGSSRSLWLFSKFSKMTFAKFDESSKGRHTHLSVVGKEXXXXXXXXXXXXXXX 663
              + +L G  +      +F+K   AK D +SK   T+L + GK+               
Sbjct: 61  SSQLDSLLGFRKKSRTGMQFAKPVVAKVDGNSKESCTYLGMKGKQNSRRWFSLRLRPRLR 120

Query: 664 XXXXXVKRLSVPKLIENARTILHKNSKKIVISAWFFVAL 780
                +KR+ + +LIE+A+T+LH+NSK++ +S     AL
Sbjct: 121 LLSYRLKRIPIRELIEDAKTMLHRNSKRVTLSTTVSFAL 159


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