BLASTX nr result

ID: Cheilocostus21_contig00029836 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00029836
         (562 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018679604.1| PREDICTED: heterogeneous nuclear ribonucleop...   135   1e-33
ref|XP_018679603.1| PREDICTED: heterogeneous nuclear ribonucleop...   135   1e-33
ref|XP_008803850.1| PREDICTED: heterogeneous nuclear ribonucleop...   101   1e-21
ref|XP_010922010.1| PREDICTED: heterogeneous nuclear ribonucleop...    89   3e-17

>ref|XP_018679604.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
           isoform X2 [Musa acuminata subsp. malaccensis]
          Length = 661

 Score =  135 bits (341), Expect = 1e-33
 Identities = 84/180 (46%), Positives = 107/180 (59%), Gaps = 8/180 (4%)
 Frame = +2

Query: 5   LDEMKRTLISPNSNAKTVLSSYSDEGSIQSFPSPNVAKVEAAL-----GAASEWLASRPS 169
           LDEMKRTL+SPN +AK  LS ++ E SI+SFP PNVA VEA+       A+    AS PS
Sbjct: 413 LDEMKRTLLSPNLSAKRDLSPFAHEHSIRSFPVPNVATVEASPVSHFPRASVNLSASHPS 472

Query: 170 LSF--HDCPTTIQVNRTHSSPGHPEDRRMRLRYNNLPRHIESPYSNYSKYETTSSHGSIP 343
           LS    D  +  Q N  +SS G   D R  L Y  LP   +S Y +YSKY  TS HG+ P
Sbjct: 473 LSVPCRDSSSGFQDNTMYSSRGSSGDHRTMLGYTGLPMQSDSAYRDYSKYGVTSCHGTDP 532

Query: 344 RPYESYGSPSIFSGNTYGTSSMPFGDARPYQENNTSDAFENARFRVDRLSSS-RMLDFES 520
            PY SY   +  +GNTY  SS+P+GD   YQ  NT+DAF    F  D  SSS +++++E+
Sbjct: 533 LPYASYTGSNFPTGNTYDRSSIPYGDMSLYQTYNTADAFRRPSF--DGFSSSAKVINYEN 590


>ref|XP_018679603.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
           isoform X1 [Musa acuminata subsp. malaccensis]
          Length = 685

 Score =  135 bits (341), Expect = 1e-33
 Identities = 84/180 (46%), Positives = 107/180 (59%), Gaps = 8/180 (4%)
 Frame = +2

Query: 5   LDEMKRTLISPNSNAKTVLSSYSDEGSIQSFPSPNVAKVEAAL-----GAASEWLASRPS 169
           LDEMKRTL+SPN +AK  LS ++ E SI+SFP PNVA VEA+       A+    AS PS
Sbjct: 437 LDEMKRTLLSPNLSAKRDLSPFAHEHSIRSFPVPNVATVEASPVSHFPRASVNLSASHPS 496

Query: 170 LSF--HDCPTTIQVNRTHSSPGHPEDRRMRLRYNNLPRHIESPYSNYSKYETTSSHGSIP 343
           LS    D  +  Q N  +SS G   D R  L Y  LP   +S Y +YSKY  TS HG+ P
Sbjct: 497 LSVPCRDSSSGFQDNTMYSSRGSSGDHRTMLGYTGLPMQSDSAYRDYSKYGVTSCHGTDP 556

Query: 344 RPYESYGSPSIFSGNTYGTSSMPFGDARPYQENNTSDAFENARFRVDRLSSS-RMLDFES 520
            PY SY   +  +GNTY  SS+P+GD   YQ  NT+DAF    F  D  SSS +++++E+
Sbjct: 557 LPYASYTGSNFPTGNTYDRSSIPYGDMSLYQTYNTADAFRRPSF--DGFSSSAKVINYEN 614


>ref|XP_008803850.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
           [Phoenix dactylifera]
 ref|XP_008803851.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
           [Phoenix dactylifera]
          Length = 678

 Score =  101 bits (252), Expect = 1e-21
 Identities = 62/159 (38%), Positives = 81/159 (50%), Gaps = 2/159 (1%)
 Frame = +2

Query: 5   LDEMKRTLISPNSNAKTVLSSYSDEGSIQSFPSPNVAKVEAALGAASEWLASRPS--LSF 178
           LDEMKR+L SPN N K   S YS E S+QSF +P VA   AA      W  S+ +  L  
Sbjct: 436 LDEMKRSLGSPNLNQKRDFSPYSRESSVQSFSTPYVADKVAATATGGHWPTSQSTVLLPG 495

Query: 179 HDCPTTIQVNRTHSSPGHPEDRRMRLRYNNLPRHIESPYSNYSKYETTSSHGSIPRPYES 358
            D   T+Q N      G     R R   +NL    +SPY + S Y  TS HG +  PY S
Sbjct: 496 SDNLNTLQFNAAAVGLGSSGGYRPRRDNSNLLMPNDSPYESVSNYGRTSFHGDVSNPYGS 555

Query: 359 YGSPSIFSGNTYGTSSMPFGDARPYQENNTSDAFENARF 475
           Y + + ++ NTY  +S+P G+  PY  ++  DAF    F
Sbjct: 556 YVASNPYNRNTYERTSVPMGNMSPYPTHSAIDAFGRPNF 594


>ref|XP_010922010.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein 1
           [Elaeis guineensis]
          Length = 674

 Score = 89.4 bits (220), Expect = 3e-17
 Identities = 58/159 (36%), Positives = 76/159 (47%), Gaps = 2/159 (1%)
 Frame = +2

Query: 5   LDEMKRTLISPNSNAKTVLSSYSDEGSIQSFPSPNVAKVEAALGAASEWLASRPS--LSF 178
           LDEMKR+L SP  N     S YS E SIQSF +       AA      W  S+ +  L  
Sbjct: 434 LDEMKRSLQSPYLNKNRDSSPYSCESSIQSFSTRYALDKGAATATGGHWSTSQSTVLLPG 493

Query: 179 HDCPTTIQVNRTHSSPGHPEDRRMRLRYNNLPRHIESPYSNYSKYETTSSHGSIPRPYES 358
            D   T Q N + +  G     R R   +NLP   +SPY N+S +  T  HG +  PY  
Sbjct: 494 PDSLNTRQFNASSAGLGSSGGYRPRGDNSNLPMPKDSPYENFSNHGKTLFHGDVSNPYGR 553

Query: 359 YGSPSIFSGNTYGTSSMPFGDARPYQENNTSDAFENARF 475
           Y + S ++ NTY  +S+P GD  P   ++  DAF    F
Sbjct: 554 YVASSPYNRNTYEGTSLPMGDMSPCPAHSAIDAFGRPDF 592


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