BLASTX nr result

ID: Cheilocostus21_contig00029813 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00029813
         (435 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009418413.1| PREDICTED: zinc finger CCCH domain-containin...    69   9e-11
ref|XP_010909653.1| PREDICTED: zinc finger CCCH domain-containin...    59   2e-07
ref|XP_008801339.1| PREDICTED: zinc finger CCCH domain-containin...    59   2e-07
ref|XP_010931837.1| PREDICTED: zinc finger CCCH domain-containin...    55   8e-06

>ref|XP_009418413.1| PREDICTED: zinc finger CCCH domain-containing protein 13 [Musa
           acuminata subsp. malaccensis]
          Length = 466

 Score = 68.9 bits (167), Expect = 9e-11
 Identities = 36/56 (64%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
 Frame = -1

Query: 426 DVDYGTKSAYMPP-PPPVAQNACKQYXXXXXXXXXXXXDSEMLDIDINSEVDIEQV 262
           DVDYGTKS+Y+PP PPPV QN  KQY            DSEMLDID+NSEV+IEQV
Sbjct: 411 DVDYGTKSSYIPPAPPPVTQNTYKQYEGDDEEVDVEKVDSEMLDIDLNSEVEIEQV 466


>ref|XP_010909653.1| PREDICTED: zinc finger CCCH domain-containing protein 13 isoform X1
           [Elaeis guineensis]
          Length = 468

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 31/51 (60%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
 Frame = -1

Query: 411 TKSAYMPPPPP-VAQNACKQYXXXXXXXXXXXXDSEMLDIDINSEVDIEQV 262
           TKSAYMPPPPP V QNA KQY            D+EM+D+DINSEV+IEQ+
Sbjct: 418 TKSAYMPPPPPPVTQNAYKQYEGDDEDVDVERVDAEMVDLDINSEVEIEQI 468


>ref|XP_008801339.1| PREDICTED: zinc finger CCCH domain-containing protein 13 [Phoenix
           dactylifera]
          Length = 469

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 31/51 (60%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
 Frame = -1

Query: 411 TKSAYMPPPPP-VAQNACKQYXXXXXXXXXXXXDSEMLDIDINSEVDIEQV 262
           TKSAYMPPPPP V QNA KQY            D+EM+D+DINSEV+IEQ+
Sbjct: 419 TKSAYMPPPPPPVTQNAYKQYEGDDEDVDVEKVDAEMVDLDINSEVEIEQI 469


>ref|XP_010931837.1| PREDICTED: zinc finger CCCH domain-containing protein 13-like
           [Elaeis guineensis]
          Length = 471

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
 Frame = -1

Query: 426 DVDYGTKSAYMPPPPP-VAQNACKQYXXXXXXXXXXXXDSEMLDIDINSEVDIEQV 262
           D +  TKSA +PPPPP V QNA KQY            D+EM+DIDI+SEV+IEQ+
Sbjct: 416 DAENRTKSACLPPPPPLVPQNAYKQYEGDDEDVEVEKVDAEMVDIDIDSEVEIEQI 471


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