BLASTX nr result

ID: Cheilocostus21_contig00029596 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00029596
         (471 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009413016.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    68   3e-10
ref|XP_009413015.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    68   3e-10
ref|XP_010920142.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    56   5e-06
ref|XP_010920141.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    56   5e-06
ref|XP_010920140.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    56   5e-06

>ref|XP_009413016.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28 isoform X2 [Musa
           acuminata subsp. malaccensis]
          Length = 730

 Score = 67.8 bits (164), Expect = 3e-10
 Identities = 34/43 (79%), Positives = 40/43 (93%), Gaps = 1/43 (2%)
 Frame = -3

Query: 469 KTIKNQN-PVRKDQSRKEEMLDLFQNDMSDRKQARISKKSNNV 344
           KTIK +N PV+KDQ+RKEEML+LFQNDMSD+KQARI KKS+NV
Sbjct: 671 KTIKYKNKPVQKDQTRKEEMLELFQNDMSDKKQARIGKKSSNV 713


>ref|XP_009413015.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28 isoform X1 [Musa
           acuminata subsp. malaccensis]
 ref|XP_018686030.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28 isoform X1 [Musa
           acuminata subsp. malaccensis]
          Length = 733

 Score = 67.8 bits (164), Expect = 3e-10
 Identities = 34/43 (79%), Positives = 40/43 (93%), Gaps = 1/43 (2%)
 Frame = -3

Query: 469 KTIKNQN-PVRKDQSRKEEMLDLFQNDMSDRKQARISKKSNNV 344
           KTIK +N PV+KDQ+RKEEML+LFQNDMSD+KQARI KKS+NV
Sbjct: 671 KTIKYKNKPVQKDQTRKEEMLELFQNDMSDKKQARIGKKSSNV 713


>ref|XP_010920142.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28 isoform X3
           [Elaeis guineensis]
          Length = 682

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 27/46 (58%), Positives = 37/46 (80%), Gaps = 5/46 (10%)
 Frame = -3

Query: 469 KTIKN-----QNPVRKDQSRKEEMLDLFQNDMSDRKQARISKKSNN 347
           K +KN     + P +K+Q+RKEEML+LFQNDMS+RKQ+R S++SNN
Sbjct: 616 KVLKNSGKRAKQPSQKNQTRKEEMLELFQNDMSERKQSRTSERSNN 661


>ref|XP_010920141.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28 isoform X2
           [Elaeis guineensis]
          Length = 707

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 27/46 (58%), Positives = 37/46 (80%), Gaps = 5/46 (10%)
 Frame = -3

Query: 469 KTIKN-----QNPVRKDQSRKEEMLDLFQNDMSDRKQARISKKSNN 347
           K +KN     + P +K+Q+RKEEML+LFQNDMS+RKQ+R S++SNN
Sbjct: 641 KVLKNSGKRAKQPSQKNQTRKEEMLELFQNDMSERKQSRTSERSNN 686


>ref|XP_010920140.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28 isoform X1
           [Elaeis guineensis]
          Length = 741

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 27/46 (58%), Positives = 37/46 (80%), Gaps = 5/46 (10%)
 Frame = -3

Query: 469 KTIKN-----QNPVRKDQSRKEEMLDLFQNDMSDRKQARISKKSNN 347
           K +KN     + P +K+Q+RKEEML+LFQNDMS+RKQ+R S++SNN
Sbjct: 675 KVLKNSGKRAKQPSQKNQTRKEEMLELFQNDMSERKQSRTSERSNN 720


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