BLASTX nr result

ID: Cheilocostus21_contig00029375 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00029375
         (448 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009391679.1| PREDICTED: reticulon-like protein B16 [Musa ...    86   1e-17
ref|XP_020107941.1| reticulon-like protein B16 [Ananas comosus] ...    66   3e-10
ref|XP_010921131.1| PREDICTED: reticulon-like protein B16 [Elaei...    65   6e-10
ref|XP_008782644.1| PREDICTED: reticulon-like protein B16 [Phoen...    65   6e-10
gb|PKA67222.1| Reticulon-like protein B16 [Apostasia shenzhenica]      60   6e-08
ref|XP_020264850.1| reticulon-like protein B16 [Asparagus offici...    55   4e-06
ref|XP_010252078.1| PREDICTED: reticulon-like protein B16 isofor...    54   7e-06
ref|XP_010252077.1| PREDICTED: reticulon-like protein B16 isofor...    54   7e-06
ref|XP_020680585.1| reticulon-like protein B16 [Dendrobium caten...    54   8e-06

>ref|XP_009391679.1| PREDICTED: reticulon-like protein B16 [Musa acuminata subsp.
           malaccensis]
 ref|XP_009391680.1| PREDICTED: reticulon-like protein B16 [Musa acuminata subsp.
           malaccensis]
          Length = 231

 Score = 85.9 bits (211), Expect = 1e-17
 Identities = 40/52 (76%), Positives = 44/52 (84%)
 Frame = -3

Query: 158 LMEGTALASLNGEIAAEGRMDGAMDQCYRLFNRQRSIHQIIGGGKAADVILW 3
           +MEG+     NGEIAAEGR + A+D CYRLFNRQRSIHQIIGGGKAADVILW
Sbjct: 1   MMEGSVSDPSNGEIAAEGRKESALDHCYRLFNRQRSIHQIIGGGKAADVILW 52


>ref|XP_020107941.1| reticulon-like protein B16 [Ananas comosus]
 ref|XP_020107942.1| reticulon-like protein B16 [Ananas comosus]
 gb|OAY79969.1| Reticulon-like protein B16 [Ananas comosus]
          Length = 236

 Score = 66.2 bits (160), Expect = 3e-10
 Identities = 33/57 (57%), Positives = 40/57 (70%), Gaps = 6/57 (10%)
 Frame = -3

Query: 155 MEGTALASLNGEIAAEGRMDGAMDQC------YRLFNRQRSIHQIIGGGKAADVILW 3
           M+ +A  + NGEI  + R + + DQC      YRLF RQRS+HQIIGGGKAADVILW
Sbjct: 1   MDSSAQDASNGEITVDSRKERSSDQCSSSAAGYRLFGRQRSMHQIIGGGKAADVILW 57


>ref|XP_010921131.1| PREDICTED: reticulon-like protein B16 [Elaeis guineensis]
          Length = 239

 Score = 65.5 bits (158), Expect = 6e-10
 Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
 Frame = -3

Query: 155 MEGTALASLNGEIAAEGRMDGAMDQC---------YRLFNRQRSIHQIIGGGKAADVILW 3
           M+ ++    NGEI  + R + ++DQC         YRLF+RQRSIHQIIGGGKAADVILW
Sbjct: 1   MDSSSQDLSNGEIGVDSRKERSLDQCASSGTAGSGYRLFDRQRSIHQIIGGGKAADVILW 60


>ref|XP_008782644.1| PREDICTED: reticulon-like protein B16 [Phoenix dactylifera]
          Length = 239

 Score = 65.5 bits (158), Expect = 6e-10
 Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 9/60 (15%)
 Frame = -3

Query: 155 MEGTALASLNGEIAAEGRMDGAMDQC---------YRLFNRQRSIHQIIGGGKAADVILW 3
           M+ ++    NGEI  + R + ++DQC         YRLF+RQRSIHQIIGGGKAADVILW
Sbjct: 1   MDSSSQDLSNGEIGVDSRKERSLDQCASSATAGGGYRLFDRQRSIHQIIGGGKAADVILW 60


>gb|PKA67222.1| Reticulon-like protein B16 [Apostasia shenzhenica]
          Length = 240

 Score = 60.1 bits (144), Expect = 6e-08
 Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 10/61 (16%)
 Frame = -3

Query: 155 MEGTALASLNGEIAAEGRMDGAMDQC----------YRLFNRQRSIHQIIGGGKAADVIL 6
           MEG       GE + E R + + D C          YRLF+RQRS+HQIIGGGKAAD+IL
Sbjct: 1   MEGGGQDHQTGEKSGEARKERSADNCCSSAAASGGGYRLFDRQRSVHQIIGGGKAADIIL 60

Query: 5   W 3
           W
Sbjct: 61  W 61


>ref|XP_020264850.1| reticulon-like protein B16 [Asparagus officinalis]
 gb|ONK67946.1| uncharacterized protein A4U43_C05F5500 [Asparagus officinalis]
          Length = 235

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 4/46 (8%)
 Frame = -3

Query: 128 NGEIAAEGRMD---GAMDQC-YRLFNRQRSIHQIIGGGKAADVILW 3
           +GE++ E R      A   C YRLF+RQR+IHQIIGGGKAADVILW
Sbjct: 11  DGEMSVESRKSLDQSAQVSCGYRLFDRQRTIHQIIGGGKAADVILW 56


>ref|XP_010252078.1| PREDICTED: reticulon-like protein B16 isoform X2 [Nelumbo nucifera]
          Length = 239

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 27/48 (56%), Positives = 32/48 (66%), Gaps = 8/48 (16%)
 Frame = -3

Query: 122 EIAAEGRMDGAMDQC--------YRLFNRQRSIHQIIGGGKAADVILW 3
           E   +GR +   + C        YRLF+RQR+IHQIIGGGKAADVILW
Sbjct: 13  EANGDGRKENLSNHCCSFSTNSGYRLFDRQRTIHQIIGGGKAADVILW 60


>ref|XP_010252077.1| PREDICTED: reticulon-like protein B16 isoform X1 [Nelumbo nucifera]
          Length = 240

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 27/48 (56%), Positives = 32/48 (66%), Gaps = 8/48 (16%)
 Frame = -3

Query: 122 EIAAEGRMDGAMDQC--------YRLFNRQRSIHQIIGGGKAADVILW 3
           E   +GR +   + C        YRLF+RQR+IHQIIGGGKAADVILW
Sbjct: 13  EANGDGRKENLSNHCCSFSTNSGYRLFDRQRTIHQIIGGGKAADVILW 60


>ref|XP_020680585.1| reticulon-like protein B16 [Dendrobium catenatum]
          Length = 207

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 10/61 (16%)
 Frame = -3

Query: 155 MEGTALASLNGEIAAEGRMDGAMDQ--------C--YRLFNRQRSIHQIIGGGKAADVIL 6
           MEG+      G+++++ R D A DQ        C  YRLF+RQ S+HQ+IGGGK AD+IL
Sbjct: 1   MEGSGQDHSVGDLSSDMRKDRAADQHSSSSMIGCGGYRLFDRQLSMHQVIGGGKVADIIL 60

Query: 5   W 3
           W
Sbjct: 61  W 61


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