BLASTX nr result

ID: Cheilocostus21_contig00028969 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00028969
         (511 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018686808.1| PREDICTED: ELF3-like protein 2 [Musa acumina...   117   3e-27
ref|XP_009407571.1| PREDICTED: ELF3-like protein 2 [Musa acumina...   113   5e-26
ref|XP_009400544.1| PREDICTED: ELF3-like protein 2 [Musa acumina...   107   6e-24
ref|XP_010924961.1| PREDICTED: protein HEADING DATE 3B-like [Ela...    55   9e-06

>ref|XP_018686808.1| PREDICTED: ELF3-like protein 2 [Musa acuminata subsp. malaccensis]
          Length = 686

 Score =  117 bits (292), Expect = 3e-27
 Identities = 71/176 (40%), Positives = 103/176 (58%), Gaps = 12/176 (6%)
 Frame = +2

Query: 20  ERTDIDGIKLRNSDGSIVGKD-------HDQRETSSIGQPKGIKEKSAFRKIAEKADCSK 178
           ++T +  IK +NS+    GK         + +ETS+IG+PK  KEK +     E+++ SK
Sbjct: 138 QQTVVACIKSKNSNRIHSGKFPKETSTIEEPKETSTIGEPKEAKEKFSSHTTGERSNSSK 197

Query: 179 GSLVRTDTSNLYLTDNSSNGNTLLCQENGDLSGAQTLNDIAISDDGKSLNAKNELHSKSA 358
            SL R DT  L+LT+ S NG+T+LC   GD SG Q LNDIA+ +DG+++  +++L SK+ 
Sbjct: 198 DSLARDDTIGLHLTEKSMNGDTVLCHGKGDQSGTQRLNDIAVINDGEAMKTRSQLCSKAL 257

Query: 359 SGKSQRTMIPPENCCDNDNAQGDRLLLLGDVKSKDDV-KPLKADA----KISPDDI 511
            GK  R      NC   D+A+ + LL   D++ KDD  +PL  D      ISPDDI
Sbjct: 258 PGKGHRATDISGNCHKEDSAKKNGLLEFRDLERKDDASEPLMVDTVPGLVISPDDI 313


>ref|XP_009407571.1| PREDICTED: ELF3-like protein 2 [Musa acuminata subsp. malaccensis]
 ref|XP_018683123.1| PREDICTED: ELF3-like protein 2 [Musa acuminata subsp. malaccensis]
 ref|XP_018683125.1| PREDICTED: ELF3-like protein 2 [Musa acuminata subsp. malaccensis]
 ref|XP_018683126.1| PREDICTED: ELF3-like protein 2 [Musa acuminata subsp. malaccensis]
          Length = 685

 Score =  113 bits (283), Expect = 5e-26
 Identities = 70/176 (39%), Positives = 105/176 (59%), Gaps = 12/176 (6%)
 Frame = +2

Query: 20  ERTDIDGIKLRNSDGSIVGKD-------HDQRETSSIGQPKGIKEKSAFRKIAEKADCSK 178
           ++TDI  +K +NS+   +GK         + +ETS+IG+PK  KEK +     E+++  K
Sbjct: 138 QQTDIACMKSKNSNRIHIGKIPKETSTIEEPKETSTIGEPKEAKEKLS-HTTGERSNSPK 196

Query: 179 GSLVRTDTSNLYLTDNSSNGNTLLCQENGDLSGAQTLNDIAISDDGKSLNAKNELHSKSA 358
            SL R DT +L+LT+ S+NG+T+LC  NGD SG Q LNDIA+ +DG+++  + +L  K+ 
Sbjct: 197 DSLARDDTISLHLTEKSTNGDTVLCHGNGDQSGTQRLNDIAVINDGEAMKTRRQLCYKAL 256

Query: 359 SGKSQRTMIPPENCCDNDNAQGDRLLLLGDVKSKDDV-KPL----KADAKISPDDI 511
            GK  R      NC   D+A+ + LL   D++ KDD  +PL     +   ISPDDI
Sbjct: 257 PGKGHRATDISGNCHKEDSAKKNGLLEFRDLERKDDASEPLIVGTVSGLVISPDDI 312


>ref|XP_009400544.1| PREDICTED: ELF3-like protein 2 [Musa acuminata subsp. malaccensis]
          Length = 754

 Score =  107 bits (268), Expect = 6e-24
 Identities = 73/175 (41%), Positives = 102/175 (58%), Gaps = 5/175 (2%)
 Frame = +2

Query: 2   SIEKFLERTDIDGIKLRNSDGSIVGKDHDQRETSSIGQPKGIKEKSAFRKIAEKADCSKG 181
           S EK L +TD    K +NS  +  GK+   +ETS I +PK  KE SA  + AE+   SK 
Sbjct: 214 SNEKPLGQTDSIETKSKNSIINRFGKN--SKETSLIEEPKETKENSASHRAAERLSSSKD 271

Query: 182 SLVRTDTSNLYLTDNSSNGNTLLCQENGDLSGAQTLNDIAISDDGKSLNAKNELHSKSAS 361
            LVR +T NL++T+ S NGN  L QENG+L+G QTLND  + ++ ++  A++EL S+++ 
Sbjct: 272 CLVRDNTGNLHVTEKSVNGNPELYQENGNLNGCQTLNDHVLLNNAEAQRARSELCSEASP 331

Query: 362 GKSQRTMIPPENCCDNDNAQGDRLLLLGD-VKSKDDVKPLKADA----KISPDDI 511
            K QRT+   ENC      +G   L  GD V+  D ++P   D      ISPDDI
Sbjct: 332 EKGQRTLNLSENC----QKEGSGSLEYGDAVRQDDTLEPSMVDTVSWLGISPDDI 382


>ref|XP_010924961.1| PREDICTED: protein HEADING DATE 3B-like [Elaeis guineensis]
 ref|XP_019707043.1| PREDICTED: protein HEADING DATE 3B-like [Elaeis guineensis]
          Length = 754

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 52/180 (28%), Positives = 85/180 (47%), Gaps = 12/180 (6%)
 Frame = +2

Query: 8   EKFLERTDIDGIKLRNSDGSIVGKDHDQRETSSIGQPKGIKEKSAFRKIAEKADCSKGSL 187
           +K LE+++   +K R  DG+    D   +ET  I   K +KE+S   + + +   +K   
Sbjct: 212 DKPLEQSNTSNLKTRTFDGN--RGDKKPKETLVI---KELKERSVPHQESGEQSNAKAPS 266

Query: 188 VRTDTSNLYLTDNSSNGNTLLCQ---ENGDLSGAQTLNDIAISDDGKSLNAKNELHSKSA 358
            R  TSN+ + + S +G T  CQ   EN  + G ++LNDI   ++     A+NE   + +
Sbjct: 267 DRDHTSNINVLEESHHGRTGFCQESCENDVMDGPRSLNDINSVENWDVSMARNESMLEPS 326

Query: 359 SGKSQRTMIPPENC----CDNDNAQGDRLLLLGDVKSKDDVKPLK-----ADAKISPDDI 511
            G S  T    + C    CDN+N      L + D + KD+V         +  +ISP D+
Sbjct: 327 LGSSCGTPSIADKCNEKGCDNENG----TLEMRDGEKKDEVSEASKMDFISGLEISPYDV 382


Top