BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00028944
         (732 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009409577.1| PREDICTED: pentatricopeptide repeat-containi...    59   2e-06

>ref|XP_009409577.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Musa acuminata subsp. malaccensis]
          Length = 794

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 44/119 (36%), Positives = 60/119 (50%), Gaps = 14/119 (11%)
 Frame = +1

Query: 100 GWENMDSVLQCLLDGYSERGTLEQVSEISRT---RICHLMNLHISALVKGRDCSGNA--- 261
           G+E    V   LLD YS+ G  ++ SEI  +   R        ISAL++ ++  G     
Sbjct: 174 GFETNAVVGSALLDVYSKCGRFQEASEIFASMDYRDVVSWTTMISALIEAKNWVGALRLY 233

Query: 262 --VVPNLPSPS------FSWGAGCFSGLRNGTMHLAHLVLWGMELNLLLRTTAAGMYAE 414
             ++    SP+           GCF GLR G M  AHLVLWGMELNL+L+T    MY++
Sbjct: 234 LLMIEGGTSPTEYTFAKLLRACGCFFGLRVGMMLHAHLVLWGMELNLVLKTALVDMYSK 292