BLASTX nr result
ID: Cheilocostus21_contig00028759
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00028759
(1199 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009391988.1| PREDICTED: probable pre-mRNA-splicing factor... 62 2e-16
ref|XP_018679353.1| PREDICTED: probable pre-mRNA-splicing factor... 62 2e-16
ref|XP_010931771.1| PREDICTED: probable pre-mRNA-splicing factor... 56 6e-15
ref|XP_010931772.1| PREDICTED: probable pre-mRNA-splicing factor... 56 6e-15
ref|XP_019708583.1| PREDICTED: probable pre-mRNA-splicing factor... 56 6e-15
ref|XP_019708584.1| PREDICTED: probable pre-mRNA-splicing factor... 56 6e-15
ref|XP_010914623.1| PREDICTED: probable pre-mRNA-splicing factor... 56 1e-14
ref|XP_008801724.1| PREDICTED: probable pre-mRNA-splicing factor... 56 1e-14
gb|PIN15563.1| mRNA splicing factor ATP-dependent RNA helicase [... 56 4e-14
ref|XP_004984587.1| probable pre-mRNA-splicing factor ATP-depend... 54 1e-13
ref|XP_020086376.1| probable pre-mRNA-splicing factor ATP-depend... 56 2e-13
ref|XP_020086377.1| probable pre-mRNA-splicing factor ATP-depend... 56 2e-13
ref|XP_020086378.1| probable pre-mRNA-splicing factor ATP-depend... 56 2e-13
ref|XP_020086379.1| probable pre-mRNA-splicing factor ATP-depend... 56 2e-13
ref|XP_020086380.1| probable pre-mRNA-splicing factor ATP-depend... 56 2e-13
ref|XP_018476276.1| PREDICTED: probable pre-mRNA-splicing factor... 60 3e-13
ref|XP_020192524.1| probable pre-mRNA-splicing factor ATP-depend... 54 3e-13
ref|XP_018476277.1| PREDICTED: probable pre-mRNA-splicing factor... 60 3e-13
ref|XP_010267917.1| PREDICTED: probable pre-mRNA-splicing factor... 57 4e-13
ref|XP_019054600.1| PREDICTED: probable pre-mRNA-splicing factor... 57 4e-13
>ref|XP_009391988.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase DEAH2 isoform X1 [Musa acuminata subsp.
malaccensis]
Length = 726
Score = 61.6 bits (148), Expect(2) = 2e-16
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +2
Query: 293 QVNGPSSAKPVASAPGINRWSGWPYSQRYFEILEKSKTLPYGSRK 427
+ NG SAK A PG+NRWSG PYSQRY EILEK KTLP +K
Sbjct: 26 KANGSLSAKTAALPPGVNRWSGRPYSQRYHEILEKRKTLPVWQQK 70
Score = 54.3 bits (129), Expect(2) = 2e-16
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = +1
Query: 412 VW*QKDEFLRTLKANQIVILVGETGSGKTTQV 507
VW QK+EFL LKANQ +ILVGETGSGKTTQ+
Sbjct: 66 VWQQKEEFLHVLKANQTLILVGETGSGKTTQI 97
>ref|XP_018679353.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase DEAH2 isoform X2 [Musa acuminata subsp.
malaccensis]
Length = 684
Score = 61.6 bits (148), Expect(2) = 2e-16
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +2
Query: 293 QVNGPSSAKPVASAPGINRWSGWPYSQRYFEILEKSKTLPYGSRK 427
+ NG SAK A PG+NRWSG PYSQRY EILEK KTLP +K
Sbjct: 26 KANGSLSAKTAALPPGVNRWSGRPYSQRYHEILEKRKTLPVWQQK 70
Score = 54.3 bits (129), Expect(2) = 2e-16
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = +1
Query: 412 VW*QKDEFLRTLKANQIVILVGETGSGKTTQV 507
VW QK+EFL LKANQ +ILVGETGSGKTTQ+
Sbjct: 66 VWQQKEEFLHVLKANQTLILVGETGSGKTTQI 97
>ref|XP_010931771.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase DEAH3 isoform X1 [Elaeis guineensis]
Length = 729
Score = 56.2 bits (134), Expect(2) = 6e-15
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +1
Query: 412 VW*QKDEFLRTLKANQIVILVGETGSGKTTQV 507
VW QKDEFL+ LKANQ +ILVGETGSGKTTQ+
Sbjct: 69 VWQQKDEFLQALKANQTLILVGETGSGKTTQI 100
Score = 54.3 bits (129), Expect(2) = 6e-15
Identities = 28/48 (58%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Frame = +2
Query: 293 QVNGPS---SAKPVASAPGINRWSGWPYSQRYFEILEKSKTLPYGSRK 427
+VNG + +A A PGINRWSG PYS RY+EILEK KTLP +K
Sbjct: 26 KVNGSAPGLAAATPAVPPGINRWSGRPYSARYYEILEKRKTLPVWQQK 73
>ref|XP_010931772.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase DEAH2 isoform X2 [Elaeis guineensis]
Length = 687
Score = 56.2 bits (134), Expect(2) = 6e-15
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +1
Query: 412 VW*QKDEFLRTLKANQIVILVGETGSGKTTQV 507
VW QKDEFL+ LKANQ +ILVGETGSGKTTQ+
Sbjct: 69 VWQQKDEFLQALKANQTLILVGETGSGKTTQI 100
Score = 54.3 bits (129), Expect(2) = 6e-15
Identities = 28/48 (58%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Frame = +2
Query: 293 QVNGPS---SAKPVASAPGINRWSGWPYSQRYFEILEKSKTLPYGSRK 427
+VNG + +A A PGINRWSG PYS RY+EILEK KTLP +K
Sbjct: 26 KVNGSAPGLAAATPAVPPGINRWSGRPYSARYYEILEKRKTLPVWQQK 73
>ref|XP_019708583.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase DEAH2 isoform X3 [Elaeis guineensis]
Length = 557
Score = 56.2 bits (134), Expect(2) = 6e-15
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +1
Query: 412 VW*QKDEFLRTLKANQIVILVGETGSGKTTQV 507
VW QKDEFL+ LKANQ +ILVGETGSGKTTQ+
Sbjct: 69 VWQQKDEFLQALKANQTLILVGETGSGKTTQI 100
Score = 54.3 bits (129), Expect(2) = 6e-15
Identities = 28/48 (58%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Frame = +2
Query: 293 QVNGPS---SAKPVASAPGINRWSGWPYSQRYFEILEKSKTLPYGSRK 427
+VNG + +A A PGINRWSG PYS RY+EILEK KTLP +K
Sbjct: 26 KVNGSAPGLAAATPAVPPGINRWSGRPYSARYYEILEKRKTLPVWQQK 73
>ref|XP_019708584.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase DEAH2 isoform X4 [Elaeis guineensis]
Length = 534
Score = 56.2 bits (134), Expect(2) = 6e-15
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +1
Query: 412 VW*QKDEFLRTLKANQIVILVGETGSGKTTQV 507
VW QKDEFL+ LKANQ +ILVGETGSGKTTQ+
Sbjct: 69 VWQQKDEFLQALKANQTLILVGETGSGKTTQI 100
Score = 54.3 bits (129), Expect(2) = 6e-15
Identities = 28/48 (58%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Frame = +2
Query: 293 QVNGPS---SAKPVASAPGINRWSGWPYSQRYFEILEKSKTLPYGSRK 427
+VNG + +A A PGINRWSG PYS RY+EILEK KTLP +K
Sbjct: 26 KVNGSAPGLAAATPAVPPGINRWSGRPYSARYYEILEKRKTLPVWQQK 73
>ref|XP_010914623.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase DEAH2 [Elaeis guineensis]
Length = 730
Score = 56.2 bits (134), Expect(2) = 1e-14
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +1
Query: 412 VW*QKDEFLRTLKANQIVILVGETGSGKTTQV 507
VW QKDEFL+ LKANQ +ILVGETGSGKTTQ+
Sbjct: 70 VWQQKDEFLQALKANQCLILVGETGSGKTTQI 101
Score = 53.1 bits (126), Expect(2) = 1e-14
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = +2
Query: 302 GPSSAKPVASAPGINRWSGWPYSQRYFEILEKSKTLPYGSRK 427
G + A A PGINRWSG PYS RY+EILEK +TLP +K
Sbjct: 33 GRAPAAAPAVPPGINRWSGRPYSARYYEILEKRRTLPVWQQK 74
>ref|XP_008801724.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase DEAH2 [Phoenix dactylifera]
Length = 730
Score = 55.8 bits (133), Expect(2) = 1e-14
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +1
Query: 412 VW*QKDEFLRTLKANQIVILVGETGSGKTTQV 507
VW QKDEFL+ LKANQ +ILVGETGSGKTTQ+
Sbjct: 70 VWQQKDEFLQVLKANQSLILVGETGSGKTTQI 101
Score = 53.5 bits (127), Expect(2) = 1e-14
Identities = 26/49 (53%), Positives = 33/49 (67%), Gaps = 4/49 (8%)
Frame = +2
Query: 293 QVNGPSSAKPVASAP----GINRWSGWPYSQRYFEILEKSKTLPYGSRK 427
+ NG + + A+AP GINRWSG PYS RY+EILEK +TLP +K
Sbjct: 26 RANGSAPGRVAAAAPAVPPGINRWSGRPYSARYYEILEKRRTLPVWQQK 74
>gb|PIN15563.1| mRNA splicing factor ATP-dependent RNA helicase [Handroanthus
impetiginosus]
Length = 729
Score = 56.2 bits (134), Expect(2) = 4e-14
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = +1
Query: 412 VW*QKDEFLRTLKANQIVILVGETGSGKTTQVRGEMLD 525
VW QK+EFL+ LKANQ +ILVGETGSGKTTQ+ +LD
Sbjct: 66 VWQQKEEFLQALKANQTLILVGETGSGKTTQIPQFVLD 103
Score = 51.6 bits (122), Expect(2) = 4e-14
Identities = 24/43 (55%), Positives = 29/43 (67%)
Frame = +2
Query: 299 NGPSSAKPVASAPGINRWSGWPYSQRYFEILEKSKTLPYGSRK 427
NG S AP IN+W+G PYSQRY+EILEK K+LP +K
Sbjct: 28 NGGSGTANSIVAPTINKWNGRPYSQRYYEILEKRKSLPVWQQK 70
>ref|XP_004984587.1| probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3
[Setaria italica]
gb|KQK91150.1| hypothetical protein SETIT_034438mg [Setaria italica]
Length = 723
Score = 54.3 bits (129), Expect(2) = 1e-13
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = +1
Query: 412 VW*QKDEFLRTLKANQIVILVGETGSGKTTQV 507
VW QKDEFLR L+ NQ +ILVGETGSGKTTQ+
Sbjct: 68 VWQQKDEFLRALRDNQTLILVGETGSGKTTQI 99
Score = 51.6 bits (122), Expect(2) = 1e-13
Identities = 23/43 (53%), Positives = 30/43 (69%)
Frame = +2
Query: 299 NGPSSAKPVASAPGINRWSGWPYSQRYFEILEKSKTLPYGSRK 427
NG ++A + P +NRW+G PYS RYFEILEK +TLP +K
Sbjct: 30 NGAAAAAAGGANPTVNRWNGRPYSGRYFEILEKRRTLPVWQQK 72
>ref|XP_020086376.1| probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2
isoform X1 [Ananas comosus]
Length = 709
Score = 55.8 bits (133), Expect(2) = 2e-13
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +1
Query: 412 VW*QKDEFLRTLKANQIVILVGETGSGKTTQV 507
VW QK+E L TLKANQI+ILVGETGSGKTTQ+
Sbjct: 58 VWQQKEELLETLKANQILILVGETGSGKTTQI 89
Score = 49.3 bits (116), Expect(2) = 2e-13
Identities = 26/46 (56%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Frame = +2
Query: 299 NGPSSAKPVASAPGI---NRWSGWPYSQRYFEILEKSKTLPYGSRK 427
NG SSA A+A NRW+G PYS RYFEILEK +TLP +K
Sbjct: 17 NGSSSAAAAAAAASPETKNRWTGRPYSPRYFEILEKRRTLPVWQQK 62
>ref|XP_020086377.1| probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2
isoform X2 [Ananas comosus]
Length = 707
Score = 55.8 bits (133), Expect(2) = 2e-13
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +1
Query: 412 VW*QKDEFLRTLKANQIVILVGETGSGKTTQV 507
VW QK+E L TLKANQI+ILVGETGSGKTTQ+
Sbjct: 58 VWQQKEELLETLKANQILILVGETGSGKTTQI 89
Score = 49.3 bits (116), Expect(2) = 2e-13
Identities = 26/46 (56%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Frame = +2
Query: 299 NGPSSAKPVASAPGI---NRWSGWPYSQRYFEILEKSKTLPYGSRK 427
NG SSA A+A NRW+G PYS RYFEILEK +TLP +K
Sbjct: 17 NGSSSAAAAAAAASPETKNRWTGRPYSPRYFEILEKRRTLPVWQQK 62
>ref|XP_020086378.1| probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3
isoform X3 [Ananas comosus]
Length = 548
Score = 55.8 bits (133), Expect(2) = 2e-13
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +1
Query: 412 VW*QKDEFLRTLKANQIVILVGETGSGKTTQV 507
VW QK+E L TLKANQI+ILVGETGSGKTTQ+
Sbjct: 58 VWQQKEELLETLKANQILILVGETGSGKTTQI 89
Score = 49.3 bits (116), Expect(2) = 2e-13
Identities = 26/46 (56%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Frame = +2
Query: 299 NGPSSAKPVASAPGI---NRWSGWPYSQRYFEILEKSKTLPYGSRK 427
NG SSA A+A NRW+G PYS RYFEILEK +TLP +K
Sbjct: 17 NGSSSAAAAAAAASPETKNRWTGRPYSPRYFEILEKRRTLPVWQQK 62
>ref|XP_020086379.1| probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3
isoform X4 [Ananas comosus]
Length = 531
Score = 55.8 bits (133), Expect(2) = 2e-13
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +1
Query: 412 VW*QKDEFLRTLKANQIVILVGETGSGKTTQV 507
VW QK+E L TLKANQI+ILVGETGSGKTTQ+
Sbjct: 58 VWQQKEELLETLKANQILILVGETGSGKTTQI 89
Score = 49.3 bits (116), Expect(2) = 2e-13
Identities = 26/46 (56%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Frame = +2
Query: 299 NGPSSAKPVASAPGI---NRWSGWPYSQRYFEILEKSKTLPYGSRK 427
NG SSA A+A NRW+G PYS RYFEILEK +TLP +K
Sbjct: 17 NGSSSAAAAAAAASPETKNRWTGRPYSPRYFEILEKRRTLPVWQQK 62
>ref|XP_020086380.1| probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3
isoform X5 [Ananas comosus]
Length = 528
Score = 55.8 bits (133), Expect(2) = 2e-13
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +1
Query: 412 VW*QKDEFLRTLKANQIVILVGETGSGKTTQV 507
VW QK+E L TLKANQI+ILVGETGSGKTTQ+
Sbjct: 58 VWQQKEELLETLKANQILILVGETGSGKTTQI 89
Score = 49.3 bits (116), Expect(2) = 2e-13
Identities = 26/46 (56%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Frame = +2
Query: 299 NGPSSAKPVASAPGI---NRWSGWPYSQRYFEILEKSKTLPYGSRK 427
NG SSA A+A NRW+G PYS RYFEILEK +TLP +K
Sbjct: 17 NGSSSAAAAAAAASPETKNRWTGRPYSPRYFEILEKRRTLPVWQQK 62
>ref|XP_018476276.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase DEAH3 isoform X1 [Raphanus sativus]
Length = 729
Score = 59.7 bits (143), Expect(2) = 3e-13
Identities = 29/41 (70%), Positives = 34/41 (82%)
Frame = +1
Query: 403 DSTVW*QKDEFLRTLKANQIVILVGETGSGKTTQVRGEMLD 525
D VW QKDEFLRTL++NQ +ILVGETGSGKTTQ+ +LD
Sbjct: 64 DLPVWLQKDEFLRTLQSNQTLILVGETGSGKTTQIPQFVLD 104
Score = 45.1 bits (105), Expect(2) = 3e-13
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = +2
Query: 296 VNGPSSAKPVASAPGINRWSGWPYSQRYFEILEKSKTLPYGSRK 427
V G +SA A+A IN+W+G PYSQRYF+ILEK + LP +K
Sbjct: 29 VLGATSAA-AAAANLINKWNGKPYSQRYFDILEKRRDLPVWLQK 71
>ref|XP_020192524.1| probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3
isoform X1 [Aegilops tauschii subsp. tauschii]
Length = 721
Score = 54.3 bits (129), Expect(2) = 3e-13
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = +1
Query: 412 VW*QKDEFLRTLKANQIVILVGETGSGKTTQV 507
VW QKDEFLR L+ NQ +ILVGETGSGKTTQ+
Sbjct: 66 VWQQKDEFLRVLRDNQTLILVGETGSGKTTQI 97
Score = 50.4 bits (119), Expect(2) = 3e-13
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = +2
Query: 296 VNGPSSAKPVASAPGINRWSGWPYSQRYFEILEKSKTLPYGSRK 427
+NG ++A A+ P INRW+G PYS RY EILEK +TLP +K
Sbjct: 29 INGAAAA--AAANPSINRWNGRPYSARYLEILEKRRTLPVWQQK 70
>ref|XP_018476277.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase DEAH3 isoform X2 [Raphanus sativus]
Length = 555
Score = 59.7 bits (143), Expect(2) = 3e-13
Identities = 29/41 (70%), Positives = 34/41 (82%)
Frame = +1
Query: 403 DSTVW*QKDEFLRTLKANQIVILVGETGSGKTTQVRGEMLD 525
D VW QKDEFLRTL++NQ +ILVGETGSGKTTQ+ +LD
Sbjct: 64 DLPVWLQKDEFLRTLQSNQTLILVGETGSGKTTQIPQFVLD 104
Score = 45.1 bits (105), Expect(2) = 3e-13
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = +2
Query: 296 VNGPSSAKPVASAPGINRWSGWPYSQRYFEILEKSKTLPYGSRK 427
V G +SA A+A IN+W+G PYSQRYF+ILEK + LP +K
Sbjct: 29 VLGATSAA-AAAANLINKWNGKPYSQRYFDILEKRRDLPVWLQK 71
>ref|XP_010267917.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase DEAH2 isoform X1 [Nelumbo nucifera]
Length = 723
Score = 56.6 bits (135), Expect(2) = 4e-13
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +1
Query: 412 VW*QKDEFLRTLKANQIVILVGETGSGKTTQV 507
VW QKDEFLR L+ NQ++ILVGETGSGKTTQ+
Sbjct: 61 VWQQKDEFLRVLRDNQVIILVGETGSGKTTQI 92
Score = 47.8 bits (112), Expect(2) = 4e-13
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +2
Query: 323 VASAPGINRWSGWPYSQRYFEILEKSKTLPYGSRK 427
+A GINRW+G PY+ RY+EILEK KTLP +K
Sbjct: 31 LAHNSGINRWNGRPYTPRYYEILEKRKTLPVWQQK 65
>ref|XP_019054600.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase DEAH2 isoform X2 [Nelumbo nucifera]
Length = 561
Score = 56.6 bits (135), Expect(2) = 4e-13
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +1
Query: 412 VW*QKDEFLRTLKANQIVILVGETGSGKTTQV 507
VW QKDEFLR L+ NQ++ILVGETGSGKTTQ+
Sbjct: 61 VWQQKDEFLRVLRDNQVIILVGETGSGKTTQI 92
Score = 47.8 bits (112), Expect(2) = 4e-13
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +2
Query: 323 VASAPGINRWSGWPYSQRYFEILEKSKTLPYGSRK 427
+A GINRW+G PY+ RY+EILEK KTLP +K
Sbjct: 31 LAHNSGINRWNGRPYTPRYYEILEKRKTLPVWQQK 65