BLASTX nr result

ID: Cheilocostus21_contig00028628 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00028628
         (1118 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OMO64726.1| hypothetical protein COLO4_31912 [Corchorus olito...    59   3e-07

>gb|OMO64726.1| hypothetical protein COLO4_31912 [Corchorus olitorius]
          Length = 99

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
 Frame = -3

Query: 963 CMSHGQSREVKAAMLLLQAMEYETAQNGETP*KRSSTF-QDFIFDVYFGIYKHTRFAPTS 787
           C SHG+S+EVKAA LL +AMEYETA +G  P ++     + F  DV FGIYK     P S
Sbjct: 40  CTSHGRSQEVKAATLLHKAMEYETAHDGGAPRRKDRQHRRAFFCDVIFGIYKQNTVCPAS 99