BLASTX nr result
ID: Cheilocostus21_contig00028606
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cheilocostus21_contig00028606 (673 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 149,584,005 sequences; 54,822,741,787 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_009413599.1| PREDICTED: regulation of nuclear pre-mRNA do... 63 6e-08 ref|XP_009413598.1| PREDICTED: UPF0400 protein C337.03 isoform X... 63 6e-08 >ref|XP_009413599.1| PREDICTED: regulation of nuclear pre-mRNA domain-containing protein 2 isoform X2 [Musa acuminata subsp. malaccensis] Length = 510 Score = 63.2 bits (152), Expect = 6e-08 Identities = 51/152 (33%), Positives = 64/152 (42%), Gaps = 6/152 (3%) Frame = +1 Query: 1 SNGLVGHQIKEDHADNKRLKLEDSVPSYFXXXXXXXXXXXXXXXXXDFLNQLP-QPPSPV 177 S+G V K+DH+DNKRLK+ED++PSY D L++ P Q PSPV Sbjct: 359 SDGAVDPSNKKDHSDNKRLKVEDNMPSY----VPLLQPPLPPFPHPDLLSRPPLQLPSPV 414 Query: 178 TPRAPTVEXXXXXXXXXXXXXXXXXXXXXXXXXXGTPQFMPITSGATTNV-----XXXXX 342 T + TVE TPQFM I +G T + Sbjct: 415 THPSSTVEPPPLPPPFPPVPPPPSSV---------TPQFMQIAAGPATGMPFGYGPPPPL 465 Query: 343 XXXXXXXXXXXXXASNPYHGFQAAEVVNTIGQ 438 A NPYHGFQA+E VN +GQ Sbjct: 466 PNFPMLGMQPYPSALNPYHGFQASEGVNHLGQ 497 >ref|XP_009413598.1| PREDICTED: UPF0400 protein C337.03 isoform X1 [Musa acuminata subsp. malaccensis] Length = 512 Score = 63.2 bits (152), Expect = 6e-08 Identities = 51/152 (33%), Positives = 64/152 (42%), Gaps = 6/152 (3%) Frame = +1 Query: 1 SNGLVGHQIKEDHADNKRLKLEDSVPSYFXXXXXXXXXXXXXXXXXDFLNQLP-QPPSPV 177 S+G V K+DH+DNKRLK+ED++PSY D L++ P Q PSPV Sbjct: 361 SDGAVDPSNKKDHSDNKRLKVEDNMPSY----VPLLQPPLPPFPHPDLLSRPPLQLPSPV 416 Query: 178 TPRAPTVEXXXXXXXXXXXXXXXXXXXXXXXXXXGTPQFMPITSGATTNV-----XXXXX 342 T + TVE TPQFM I +G T + Sbjct: 417 THPSSTVEPPPLPPPFPPVPPPPSSV---------TPQFMQIAAGPATGMPFGYGPPPPL 467 Query: 343 XXXXXXXXXXXXXASNPYHGFQAAEVVNTIGQ 438 A NPYHGFQA+E VN +GQ Sbjct: 468 PNFPMLGMQPYPSALNPYHGFQASEGVNHLGQ 499