BLASTX nr result
ID: Cheilocostus21_contig00028452
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00028452
(553 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009403485.1| PREDICTED: pentatricopeptide repeat-containi... 83 4e-15
ref|XP_008804854.1| PREDICTED: pentatricopeptide repeat-containi... 79 9e-14
gb|PKA65759.1| Pentatricopeptide repeat-containing protein [Apos... 74 5e-12
ref|XP_010905997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 72 2e-11
ref|XP_020693715.1| pentatricopeptide repeat-containing protein ... 70 1e-10
ref|XP_019051734.1| PREDICTED: pentatricopeptide repeat-containi... 70 1e-10
ref|XP_020100255.1| pentatricopeptide repeat-containing protein ... 69 2e-10
ref|XP_020249479.1| pentatricopeptide repeat-containing protein ... 68 3e-10
ref|XP_017615876.1| PREDICTED: pentatricopeptide repeat-containi... 68 7e-10
gb|PPS06297.1| hypothetical protein GOBAR_AA14352 [Gossypium bar... 67 1e-09
ref|XP_020572143.1| pentatricopeptide repeat-containing protein ... 66 2e-09
gb|OMO68364.1| hypothetical protein COLO4_29731 [Corchorus olito... 66 3e-09
ref|XP_016738400.1| PREDICTED: pentatricopeptide repeat-containi... 65 4e-09
ref|XP_022748452.1| pentatricopeptide repeat-containing protein ... 65 6e-09
ref|XP_016680373.1| PREDICTED: pentatricopeptide repeat-containi... 65 6e-09
ref|XP_012441679.1| PREDICTED: pentatricopeptide repeat-containi... 65 6e-09
gb|EOY08249.1| Pentatricopeptide (PPR) repeat-containing protein... 64 2e-08
ref|XP_007027747.2| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
ref|XP_021289097.1| pentatricopeptide repeat-containing protein ... 63 3e-08
ref|XP_010096729.1| pentatricopeptide repeat-containing protein ... 62 5e-08
>ref|XP_009403485.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36240
[Musa acuminata subsp. malaccensis]
ref|XP_009403486.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36240
[Musa acuminata subsp. malaccensis]
ref|XP_018683615.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36240
[Musa acuminata subsp. malaccensis]
ref|XP_018683616.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36240
[Musa acuminata subsp. malaccensis]
ref|XP_018683617.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36240
[Musa acuminata subsp. malaccensis]
Length = 500
Score = 82.8 bits (203), Expect = 4e-15
Identities = 40/58 (68%), Positives = 46/58 (79%)
Frame = +1
Query: 1 EPNSVTFGILARGFSKEGRTKEGEFMVTEMLDAGLIPNIATYNKLMERMQIGEKSHSS 174
+P+SV ILA GFS+EGR +EGE +V EMLDAG IPNIATYNKLMER+Q K HSS
Sbjct: 443 KPDSVMLSILAHGFSREGRKREGECVVNEMLDAGFIPNIATYNKLMERLQTRRKPHSS 500
>ref|XP_008804854.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36240
[Phoenix dactylifera]
Length = 494
Score = 79.0 bits (193), Expect = 9e-14
Identities = 36/57 (63%), Positives = 46/57 (80%)
Frame = +1
Query: 1 EPNSVTFGILARGFSKEGRTKEGEFMVTEMLDAGLIPNIATYNKLMERMQIGEKSHS 171
EP+ VT G+L +GFS+EGRT+EGE +V EMLD G IPNIA+YN+LME +Q G KS +
Sbjct: 436 EPDGVTLGVLVKGFSREGRTREGEGVVDEMLDRGFIPNIASYNRLMEGLQNGNKSRT 492
>gb|PKA65759.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
Length = 491
Score = 73.9 bits (180), Expect = 5e-12
Identities = 34/52 (65%), Positives = 43/52 (82%)
Frame = +1
Query: 1 EPNSVTFGILARGFSKEGRTKEGEFMVTEMLDAGLIPNIATYNKLMERMQIG 156
+P+ VTF ILARGF++EGR +EGE +V EMLDAG I NIATYN+LM+ +Q G
Sbjct: 440 DPDGVTFSILARGFAREGRKREGERVVDEMLDAGFIANIATYNRLMKELQTG 491
>ref|XP_010905997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g36240 [Elaeis guineensis]
Length = 494
Score = 72.4 bits (176), Expect = 2e-11
Identities = 33/56 (58%), Positives = 44/56 (78%)
Frame = +1
Query: 4 PNSVTFGILARGFSKEGRTKEGEFMVTEMLDAGLIPNIATYNKLMERMQIGEKSHS 171
P+ VT G+L +GFS+EGRT+EGE +V EMLD G I NIA+Y++LME +Q G KS +
Sbjct: 437 PDGVTLGVLVKGFSREGRTREGEGVVDEMLDRGFIRNIASYDRLMEELQNGNKSQT 492
>ref|XP_020693715.1| pentatricopeptide repeat-containing protein At2g36240-like
[Dendrobium catenatum]
gb|PKU62287.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
Length = 491
Score = 70.1 bits (170), Expect = 1e-10
Identities = 32/53 (60%), Positives = 40/53 (75%)
Frame = +1
Query: 1 EPNSVTFGILARGFSKEGRTKEGEFMVTEMLDAGLIPNIATYNKLMERMQIGE 159
+PN TF IL +GF+ EG+ KEGE +V EMLDAG IPNIA YN+LME +Q +
Sbjct: 439 DPNGATFSILVQGFAGEGKKKEGERVVDEMLDAGFIPNIAVYNRLMEDLQFSK 491
>ref|XP_019051734.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36240
[Nelumbo nucifera]
Length = 493
Score = 70.1 bits (170), Expect = 1e-10
Identities = 32/55 (58%), Positives = 42/55 (76%)
Frame = +1
Query: 1 EPNSVTFGILARGFSKEGRTKEGEFMVTEMLDAGLIPNIATYNKLMERMQIGEKS 165
EP+ VT+ L GFS+EG+TKEGE M+ EMLD G I +IA+YN+LM+ +Q G KS
Sbjct: 429 EPDGVTYNALISGFSREGKTKEGEGMIDEMLDKGFITDIASYNRLMDGLQTGNKS 483
>ref|XP_020100255.1| pentatricopeptide repeat-containing protein At2g36240, partial
[Ananas comosus]
Length = 415
Score = 69.3 bits (168), Expect = 2e-10
Identities = 32/53 (60%), Positives = 41/53 (77%)
Frame = +1
Query: 1 EPNSVTFGILARGFSKEGRTKEGEFMVTEMLDAGLIPNIATYNKLMERMQIGE 159
EP+ VTF IL RGFS+EG+ KEGE ++ EMLD IPNIATYN+ +E +Q G+
Sbjct: 363 EPDGVTFSILVRGFSREGKGKEGEGVLDEMLDGDFIPNIATYNRYLEGLQRGK 415
>ref|XP_020249479.1| pentatricopeptide repeat-containing protein At2g36240-like
[Asparagus officinalis]
gb|ONK57147.1| uncharacterized protein A4U43_C10F17090 [Asparagus officinalis]
Length = 260
Score = 67.8 bits (164), Expect = 3e-10
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +1
Query: 7 NSVTFGILARGFSKEGRTKEGEFMVTEMLDAGLIPNIATYNKLMERMQ 150
+ TFGIL RGFS+EGR +EGE +V EMLD G IPNIATYNKL + ++
Sbjct: 197 DGTTFGILVRGFSREGRVREGEKVVDEMLDGGFIPNIATYNKLRDGLK 244
>ref|XP_017615876.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36240
[Gossypium arboreum]
Length = 492
Score = 67.8 bits (164), Expect = 7e-10
Identities = 33/64 (51%), Positives = 47/64 (73%)
Frame = +1
Query: 1 EPNSVTFGILARGFSKEGRTKEGEFMVTEMLDAGLIPNIATYNKLMERMQIGEKSHSSNL 180
EP+ VT+ IL G++++GR KEGE +V EMLD G IP+IATYN+LM+R+ S SS L
Sbjct: 428 EPDEVTYNILVYGYTRDGRRKEGENLVDEMLDKGYIPDIATYNRLMDRL---SNSTSSTL 484
Query: 181 QSMN 192
+ ++
Sbjct: 485 EKVS 488
>gb|PPS06297.1| hypothetical protein GOBAR_AA14352 [Gossypium barbadense]
Length = 591
Score = 67.0 bits (162), Expect = 1e-09
Identities = 33/61 (54%), Positives = 45/61 (73%)
Frame = +1
Query: 1 EPNSVTFGILARGFSKEGRTKEGEFMVTEMLDAGLIPNIATYNKLMERMQIGEKSHSSNL 180
EP+ VT+ IL G++++GR KEGE +V EMLD G IP+IATYN+LM+R+ S SS L
Sbjct: 428 EPDEVTYNILVYGYTRDGRRKEGENLVDEMLDKGYIPDIATYNRLMDRL---SNSTSSTL 484
Query: 181 Q 183
+
Sbjct: 485 E 485
>ref|XP_020572143.1| pentatricopeptide repeat-containing protein At2g36240 [Phalaenopsis
equestris]
Length = 331
Score = 65.9 bits (159), Expect = 2e-09
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = +1
Query: 1 EPNSVTFGILARGFSKEGRTKEGEFMVTEMLDAGLIPNIATYNKLME 141
+PN TF IL RGF +EG KEGE +V EMLDAG I NIA YN+LME
Sbjct: 279 DPNGATFSILVRGFGREGMKKEGERVVDEMLDAGFISNIAIYNRLME 325
>gb|OMO68364.1| hypothetical protein COLO4_29731 [Corchorus olitorius]
Length = 533
Score = 65.9 bits (159), Expect = 3e-09
Identities = 37/98 (37%), Positives = 56/98 (57%)
Frame = +1
Query: 1 EPNSVTFGILARGFSKEGRTKEGEFMVTEMLDAGLIPNIATYNKLMERMQIGEKSHSSNL 180
EP+ VT IL G+ +EGR KEGE +V EMLD G IP+IATYN+LM+ + S S +
Sbjct: 428 EPDEVTCNILVHGYIREGRRKEGEVLVDEMLDKGFIPDIATYNRLMDAL---SNSRCSTM 484
Query: 181 QSMN**EDTESKYMENLFHITSKD*LRTEAQLLADMKR 294
+ ++ Y+ ++ R +A ++ DM+R
Sbjct: 485 KEVSPIHRDNMHYLLITTRKERQERSRKKATVIVDMER 522
>ref|XP_016738400.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Gossypium hirsutum]
Length = 492
Score = 65.5 bits (158), Expect = 4e-09
Identities = 32/64 (50%), Positives = 46/64 (71%)
Frame = +1
Query: 1 EPNSVTFGILARGFSKEGRTKEGEFMVTEMLDAGLIPNIATYNKLMERMQIGEKSHSSNL 180
EP+ VT+ IL G++++GR KEGE +V EMLD G IP+IATY +LM+R+ S SS L
Sbjct: 428 EPDEVTYNILVYGYTRDGRRKEGENLVDEMLDKGYIPDIATYTRLMDRL---SNSTSSTL 484
Query: 181 QSMN 192
+ ++
Sbjct: 485 EKVS 488
>ref|XP_022748452.1| pentatricopeptide repeat-containing protein At2g36240 [Durio
zibethinus]
ref|XP_022748453.1| pentatricopeptide repeat-containing protein At2g36240 [Durio
zibethinus]
Length = 491
Score = 65.1 bits (157), Expect = 6e-09
Identities = 28/47 (59%), Positives = 38/47 (80%)
Frame = +1
Query: 1 EPNSVTFGILARGFSKEGRTKEGEFMVTEMLDAGLIPNIATYNKLME 141
EP+ VT+ IL G++++GR KEGE +V EMLD G IP+IATYN+LM+
Sbjct: 427 EPDEVTYSILVYGYTRDGRRKEGEILVDEMLDKGFIPDIATYNRLMD 473
>ref|XP_016680373.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Gossypium hirsutum]
Length = 492
Score = 65.1 bits (157), Expect = 6e-09
Identities = 32/64 (50%), Positives = 46/64 (71%)
Frame = +1
Query: 1 EPNSVTFGILARGFSKEGRTKEGEFMVTEMLDAGLIPNIATYNKLMERMQIGEKSHSSNL 180
EP+ VT+ IL G++++GR KEGE +V EMLD G IP+IATYN+LM+ + S SS L
Sbjct: 428 EPDEVTYNILVYGYTRDGRRKEGENLVDEMLDKGYIPDIATYNRLMDGL---SNSTSSKL 484
Query: 181 QSMN 192
+ ++
Sbjct: 485 EKVS 488
>ref|XP_012441679.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36240
[Gossypium raimondii]
gb|KJB62139.1| hypothetical protein B456_009G402600 [Gossypium raimondii]
Length = 492
Score = 65.1 bits (157), Expect = 6e-09
Identities = 32/64 (50%), Positives = 46/64 (71%)
Frame = +1
Query: 1 EPNSVTFGILARGFSKEGRTKEGEFMVTEMLDAGLIPNIATYNKLMERMQIGEKSHSSNL 180
EP+ VT+ IL G++++GR KEGE +V EMLD G IP+IATYN+LM+ + S SS L
Sbjct: 428 EPDEVTYNILVYGYTRDGRRKEGENLVDEMLDKGYIPDIATYNRLMDGL---SNSTSSKL 484
Query: 181 QSMN 192
+ ++
Sbjct: 485 EKVS 488
>gb|EOY08249.1| Pentatricopeptide (PPR) repeat-containing protein, putative
[Theobroma cacao]
Length = 492
Score = 63.5 bits (153), Expect = 2e-08
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = +1
Query: 1 EPNSVTFGILARGFSKEGRTKEGEFMVTEMLDAGLIPNIATYNKLME 141
EP+ VT+ IL G+++EGR KEGE +V EMLD G IP+IA YN+LM+
Sbjct: 426 EPDEVTYNILIYGYTREGRRKEGEILVDEMLDKGFIPDIARYNRLMD 472
>ref|XP_007027747.2| PREDICTED: pentatricopeptide repeat-containing protein At2g36240
[Theobroma cacao]
Length = 493
Score = 63.5 bits (153), Expect = 2e-08
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = +1
Query: 1 EPNSVTFGILARGFSKEGRTKEGEFMVTEMLDAGLIPNIATYNKLME 141
EP+ VT+ IL G+++EGR KEGE +V EMLD G IP+IA YN+LM+
Sbjct: 427 EPDEVTYNILIYGYTREGRRKEGEILVDEMLDKGFIPDIARYNRLMD 473
>ref|XP_021289097.1| pentatricopeptide repeat-containing protein At2g36240 [Herrania
umbratica]
ref|XP_021289098.1| pentatricopeptide repeat-containing protein At2g36240 [Herrania
umbratica]
Length = 493
Score = 63.2 bits (152), Expect = 3e-08
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = +1
Query: 1 EPNSVTFGILARGFSKEGRTKEGEFMVTEMLDAGLIPNIATYNKLME 141
EP+ VT+ IL G+++EGR KEGE +V EMLD G IP+IA YN+LM+
Sbjct: 427 EPDEVTYDILIYGYTREGRRKEGEILVDEMLDKGFIPDIARYNRLMD 473
>ref|XP_010096729.1| pentatricopeptide repeat-containing protein At2g36240 [Morus
notabilis]
gb|EXB65581.1| hypothetical protein L484_025847 [Morus notabilis]
Length = 547
Score = 62.4 bits (150), Expect = 5e-08
Identities = 27/48 (56%), Positives = 38/48 (79%)
Frame = +1
Query: 4 PNSVTFGILARGFSKEGRTKEGEFMVTEMLDAGLIPNIATYNKLMERM 147
P+S+ + IL G++KEG KEGE +V EMLD G IP+IA+YN+LM+R+
Sbjct: 493 PDSMAYNILVSGYTKEGERKEGEKLVDEMLDKGFIPDIASYNRLMDRL 540