BLASTX nr result
ID: Cheilocostus21_contig00028062
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00028062
(720 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010909060.1| PREDICTED: probable mediator of RNA polymera... 101 5e-21
ref|XP_010909059.1| PREDICTED: probable mediator of RNA polymera... 101 5e-21
ref|XP_008798351.1| PREDICTED: probable mediator of RNA polymera... 101 5e-21
ref|XP_008798350.1| PREDICTED: probable mediator of RNA polymera... 101 5e-21
ref|XP_008798349.1| PREDICTED: probable mediator of RNA polymera... 101 5e-21
ref|XP_009393098.1| PREDICTED: probable mediator of RNA polymera... 100 1e-20
ref|XP_009391608.1| PREDICTED: probable mediator of RNA polymera... 100 2e-20
ref|XP_009420970.1| PREDICTED: probable mediator of RNA polymera... 98 7e-20
ref|XP_009386944.1| PREDICTED: probable mediator of RNA polymera... 97 2e-19
ref|XP_009399947.1| PREDICTED: probable mediator of RNA polymera... 96 4e-19
ref|XP_009402460.1| PREDICTED: probable mediator of RNA polymera... 95 8e-19
ref|XP_009412193.1| PREDICTED: probable mediator of RNA polymera... 95 1e-18
ref|XP_009412192.1| PREDICTED: probable mediator of RNA polymera... 95 1e-18
ref|XP_020697253.1| probable mediator of RNA polymerase II trans... 89 8e-17
ref|XP_020585980.1| probable mediator of RNA polymerase II trans... 89 1e-16
gb|OVA06215.1| Transcription elongation factor [Macleaya cordata] 85 3e-15
ref|XP_010055717.1| PREDICTED: probable mediator of RNA polymera... 81 7e-14
ref|XP_023925778.1| probable mediator of RNA polymerase II trans... 80 1e-13
ref|XP_023925776.1| probable mediator of RNA polymerase II trans... 80 1e-13
gb|PNX83302.1| putative mediator of RNA polymerase II transcript... 77 1e-13
>ref|XP_010909060.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b isoform X2 [Elaeis guineensis]
Length = 449
Score = 101 bits (251), Expect = 5e-21
Identities = 47/60 (78%), Positives = 54/60 (90%)
Frame = +1
Query: 541 MANSSESMEYWRKIFRSADADIFEVMEQAILVAASDYPEEFRSRRDRIAEKFFTALLPRC 720
MANSS S++YWRK FRSA++DIFEV+EQAILVAASDYP+EFRSRRD I EK +T LLPRC
Sbjct: 1 MANSSASLDYWRKFFRSANSDIFEVLEQAILVAASDYPQEFRSRRDGIGEKLYTCLLPRC 60
>ref|XP_010909059.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b isoform X1 [Elaeis guineensis]
Length = 450
Score = 101 bits (251), Expect = 5e-21
Identities = 47/60 (78%), Positives = 54/60 (90%)
Frame = +1
Query: 541 MANSSESMEYWRKIFRSADADIFEVMEQAILVAASDYPEEFRSRRDRIAEKFFTALLPRC 720
MANSS S++YWRK FRSA++DIFEV+EQAILVAASDYP+EFRSRRD I EK +T LLPRC
Sbjct: 1 MANSSASLDYWRKFFRSANSDIFEVLEQAILVAASDYPQEFRSRRDGIGEKLYTCLLPRC 60
>ref|XP_008798351.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b isoform X3 [Phoenix dactylifera]
Length = 451
Score = 101 bits (251), Expect = 5e-21
Identities = 47/60 (78%), Positives = 54/60 (90%)
Frame = +1
Query: 541 MANSSESMEYWRKIFRSADADIFEVMEQAILVAASDYPEEFRSRRDRIAEKFFTALLPRC 720
MANSS S++YWRK FRSA++DIFEV+EQAILVAASDYP+EFRSRRD I EK +T LLPRC
Sbjct: 1 MANSSASLDYWRKFFRSANSDIFEVLEQAILVAASDYPQEFRSRRDGIGEKLYTCLLPRC 60
>ref|XP_008798350.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b isoform X2 [Phoenix dactylifera]
Length = 452
Score = 101 bits (251), Expect = 5e-21
Identities = 47/60 (78%), Positives = 54/60 (90%)
Frame = +1
Query: 541 MANSSESMEYWRKIFRSADADIFEVMEQAILVAASDYPEEFRSRRDRIAEKFFTALLPRC 720
MANSS S++YWRK FRSA++DIFEV+EQAILVAASDYP+EFRSRRD I EK +T LLPRC
Sbjct: 1 MANSSASLDYWRKFFRSANSDIFEVLEQAILVAASDYPQEFRSRRDGIGEKLYTCLLPRC 60
>ref|XP_008798349.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b isoform X1 [Phoenix dactylifera]
Length = 453
Score = 101 bits (251), Expect = 5e-21
Identities = 47/60 (78%), Positives = 54/60 (90%)
Frame = +1
Query: 541 MANSSESMEYWRKIFRSADADIFEVMEQAILVAASDYPEEFRSRRDRIAEKFFTALLPRC 720
MANSS S++YWRK FRSA++DIFEV+EQAILVAASDYP+EFRSRRD I EK +T LLPRC
Sbjct: 1 MANSSASLDYWRKFFRSANSDIFEVLEQAILVAASDYPQEFRSRRDGIGEKLYTCLLPRC 60
>ref|XP_009393098.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Musa acuminata subsp. malaccensis]
Length = 479
Score = 100 bits (249), Expect = 1e-20
Identities = 46/60 (76%), Positives = 56/60 (93%)
Frame = +1
Query: 541 MANSSESMEYWRKIFRSADADIFEVMEQAILVAASDYPEEFRSRRDRIAEKFFTALLPRC 720
MA+SS S++YWR+ FRSA++DIFEV+EQAILVAASDYP++FRSRRD+I EK FTALLPRC
Sbjct: 1 MASSSSSVDYWRRFFRSANSDIFEVIEQAILVAASDYPQQFRSRRDQIVEKIFTALLPRC 60
>ref|XP_009391608.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Musa acuminata subsp. malaccensis]
ref|XP_009391609.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Musa acuminata subsp. malaccensis]
ref|XP_009391610.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Musa acuminata subsp. malaccensis]
Length = 439
Score = 99.8 bits (247), Expect = 2e-20
Identities = 46/60 (76%), Positives = 53/60 (88%)
Frame = +1
Query: 541 MANSSESMEYWRKIFRSADADIFEVMEQAILVAASDYPEEFRSRRDRIAEKFFTALLPRC 720
MA SS S++YWRK FRSA++DIFEV+E A+LVAASDYPEEFRSRRDR+ EK FT LLPRC
Sbjct: 1 MAGSSGSLDYWRKFFRSANSDIFEVIEHAVLVAASDYPEEFRSRRDRMVEKLFTVLLPRC 60
>ref|XP_009420970.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Musa acuminata subsp. malaccensis]
Length = 469
Score = 98.2 bits (243), Expect = 7e-20
Identities = 45/60 (75%), Positives = 55/60 (91%)
Frame = +1
Query: 541 MANSSESMEYWRKIFRSADADIFEVMEQAILVAASDYPEEFRSRRDRIAEKFFTALLPRC 720
MA+SS S++YWRK FRSA++DIF V+EQA+ VAASDYP+EF+SRRD+I EKFFTALLPRC
Sbjct: 1 MASSSGSIDYWRKFFRSANSDIFGVIEQAVAVAASDYPQEFKSRRDQIVEKFFTALLPRC 60
>ref|XP_009386944.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Musa acuminata subsp. malaccensis]
Length = 477
Score = 96.7 bits (239), Expect = 2e-19
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = +1
Query: 541 MANSSESMEYWRKIFRSADADIFEVMEQAILVAASDYPEEFRSRRDRIAEKFFTALLPRC 720
MA+SS ++YWRK FRSA++DIFEVME AILVAASDYP+EFRSRRD+I EK F LLPRC
Sbjct: 1 MASSSGPLDYWRKFFRSANSDIFEVMEHAILVAASDYPQEFRSRRDQIVEKLFAVLLPRC 60
>ref|XP_009399947.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Musa acuminata subsp. malaccensis]
Length = 476
Score = 95.9 bits (237), Expect = 4e-19
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = +1
Query: 541 MANSSESMEYWRKIFRSADADIFEVMEQAILVAASDYPEEFRSRRDRIAEKFFTALLPRC 720
MA+SS S++YWRK FRSA++DIFEVME AILVAASDYP+EFRSRR +I EK F LLPRC
Sbjct: 1 MASSSGSLDYWRKFFRSANSDIFEVMEHAILVAASDYPQEFRSRRHQIVEKLFAVLLPRC 60
>ref|XP_009402460.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Musa acuminata subsp. malaccensis]
Length = 482
Score = 95.1 bits (235), Expect = 8e-19
Identities = 45/60 (75%), Positives = 51/60 (85%)
Frame = +1
Query: 541 MANSSESMEYWRKIFRSADADIFEVMEQAILVAASDYPEEFRSRRDRIAEKFFTALLPRC 720
MA+ S++YWRK FRSAD+DIF VME AI+VAASDYPEEFRSRRD + EKFF ALLPRC
Sbjct: 1 MASLPGSVDYWRKFFRSADSDIFGVMEHAIVVAASDYPEEFRSRRDGLVEKFFAALLPRC 60
>ref|XP_009412193.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b isoform X2 [Musa acuminata subsp.
malaccensis]
Length = 476
Score = 94.7 bits (234), Expect = 1e-18
Identities = 45/60 (75%), Positives = 53/60 (88%)
Frame = +1
Query: 541 MANSSESMEYWRKIFRSADADIFEVMEQAILVAASDYPEEFRSRRDRIAEKFFTALLPRC 720
MA+SS S++YWRK FRSA++DIFEV+EQAILVAASD P +FRSRRD+I EK F ALLPRC
Sbjct: 1 MASSSGSVDYWRKFFRSANSDIFEVIEQAILVAASDCPRQFRSRRDQIVEKLFAALLPRC 60
>ref|XP_009412192.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b isoform X1 [Musa acuminata subsp.
malaccensis]
Length = 477
Score = 94.7 bits (234), Expect = 1e-18
Identities = 45/60 (75%), Positives = 53/60 (88%)
Frame = +1
Query: 541 MANSSESMEYWRKIFRSADADIFEVMEQAILVAASDYPEEFRSRRDRIAEKFFTALLPRC 720
MA+SS S++YWRK FRSA++DIFEV+EQAILVAASD P +FRSRRD+I EK F ALLPRC
Sbjct: 1 MASSSGSVDYWRKFFRSANSDIFEVIEQAILVAASDCPRQFRSRRDQIVEKLFAALLPRC 60
>ref|XP_020697253.1| probable mediator of RNA polymerase II transcription subunit 26b
[Dendrobium catenatum]
Length = 442
Score = 89.4 bits (220), Expect = 8e-17
Identities = 42/60 (70%), Positives = 50/60 (83%)
Frame = +1
Query: 541 MANSSESMEYWRKIFRSADADIFEVMEQAILVAASDYPEEFRSRRDRIAEKFFTALLPRC 720
MA S+S++YWRK FRSA++DIFEV+EQAI+VAA D P+EFRSRRDRIAEK FT RC
Sbjct: 1 MAGKSDSLDYWRKFFRSANSDIFEVIEQAIVVAAVDCPKEFRSRRDRIAEKLFTCKFSRC 60
>ref|XP_020585980.1| probable mediator of RNA polymerase II transcription subunit 26b
[Phalaenopsis equestris]
ref|XP_020585981.1| probable mediator of RNA polymerase II transcription subunit 26b
[Phalaenopsis equestris]
Length = 450
Score = 89.0 bits (219), Expect = 1e-16
Identities = 43/60 (71%), Positives = 50/60 (83%)
Frame = +1
Query: 541 MANSSESMEYWRKIFRSADADIFEVMEQAILVAASDYPEEFRSRRDRIAEKFFTALLPRC 720
MA S S++YWRK FRSA++DIFEV+EQAI+VAA D P+EFRSRRDRIAEK FT L RC
Sbjct: 1 MAGKSISLDYWRKFFRSANSDIFEVIEQAIVVAAVDCPKEFRSRRDRIAEKLFTCRLSRC 60
>gb|OVA06215.1| Transcription elongation factor [Macleaya cordata]
Length = 449
Score = 84.7 bits (208), Expect = 3e-15
Identities = 40/60 (66%), Positives = 48/60 (80%)
Frame = +1
Query: 541 MANSSESMEYWRKIFRSADADIFEVMEQAILVAASDYPEEFRSRRDRIAEKFFTALLPRC 720
MA S M+YWRK FRSA+ DIF+V+E AI+VAASD P+EFR+RRDRIAEK F+ L RC
Sbjct: 1 MATKSGDMDYWRKYFRSANTDIFDVIENAIVVAASDCPKEFRNRRDRIAEKLFSCRLSRC 60
>ref|XP_010055717.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Eucalyptus grandis]
gb|KCW90010.1| hypothetical protein EUGRSUZ_A02206 [Eucalyptus grandis]
Length = 457
Score = 80.9 bits (198), Expect = 7e-14
Identities = 36/60 (60%), Positives = 49/60 (81%)
Frame = +1
Query: 541 MANSSESMEYWRKIFRSADADIFEVMEQAILVAASDYPEEFRSRRDRIAEKFFTALLPRC 720
MA S+S++YWR FR+A+ DIF+++++AI+VAASD P+EFR RRDRIAE+ FT L RC
Sbjct: 1 MAMKSDSLDYWRHYFRTANCDIFDIIDRAIIVAASDCPKEFRLRRDRIAERLFTCRLTRC 60
>ref|XP_023925778.1| probable mediator of RNA polymerase II transcription subunit 26b
isoform X2 [Quercus suber]
Length = 459
Score = 80.5 bits (197), Expect = 1e-13
Identities = 36/61 (59%), Positives = 49/61 (80%)
Frame = +1
Query: 538 VMANSSESMEYWRKIFRSADADIFEVMEQAILVAASDYPEEFRSRRDRIAEKFFTALLPR 717
+MA S S++YWR FR+A++DIFE+++ AI+VAASD P+EF+ RRDRIAEK F+ L R
Sbjct: 1 MMAKKSGSLDYWRNYFRTANSDIFEIIDHAIMVAASDCPKEFKLRRDRIAEKLFSCKLSR 60
Query: 718 C 720
C
Sbjct: 61 C 61
>ref|XP_023925776.1| probable mediator of RNA polymerase II transcription subunit 26b
isoform X1 [Quercus suber]
ref|XP_023925777.1| probable mediator of RNA polymerase II transcription subunit 26b
isoform X1 [Quercus suber]
gb|POE94060.1| putative mediator of rna polymerase ii transcription subunit 26b
[Quercus suber]
Length = 463
Score = 80.5 bits (197), Expect = 1e-13
Identities = 36/61 (59%), Positives = 49/61 (80%)
Frame = +1
Query: 538 VMANSSESMEYWRKIFRSADADIFEVMEQAILVAASDYPEEFRSRRDRIAEKFFTALLPR 717
+MA S S++YWR FR+A++DIFE+++ AI+VAASD P+EF+ RRDRIAEK F+ L R
Sbjct: 1 MMAKKSGSLDYWRNYFRTANSDIFEIIDHAIMVAASDCPKEFKLRRDRIAEKLFSCKLSR 60
Query: 718 C 720
C
Sbjct: 61 C 61
>gb|PNX83302.1| putative mediator of RNA polymerase II transcription subunit
26b-like protein, partial [Trifolium pratense]
Length = 169
Score = 76.6 bits (187), Expect = 1e-13
Identities = 33/56 (58%), Positives = 47/56 (83%)
Frame = +1
Query: 553 SESMEYWRKIFRSADADIFEVMEQAILVAASDYPEEFRSRRDRIAEKFFTALLPRC 720
SE +++WRK FRS+++DIF +++ AI+VAA D P+EF+SRRD+IAEK F+ LL RC
Sbjct: 3 SEELDHWRKYFRSSNSDIFSIIDNAIVVAAMDCPKEFKSRRDKIAEKLFSVLLNRC 58