BLASTX nr result

ID: Cheilocostus21_contig00027959 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00027959
         (701 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBW30215.1| Conserved hypothetical protein [Musa balbisiana]       58   2e-07
emb|CBW30177.1| Conserved hypothetical protein [Musa balbisiana]       55   3e-06

>emb|CBW30215.1| Conserved hypothetical protein [Musa balbisiana]
          Length = 104

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
 Frame = -2

Query: 475 QDWPSKPTDNEEEEHVTPRSTSEKQGK-LVCXXXXXXXXXXXXKSEAPPGGYFTTVPDDL 299
           Q+ PSK T +EE E VTP+S      + LVC            K + PP G++  VP DL
Sbjct: 27  QEDPSKSTSSEEGECVTPKSEQHAVKRPLVCPSAPRKPRPVKRKLQPPPDGFYP-VPSDL 85

Query: 298 ASIFVPLPHPLNKKIQLG 245
           ASIF+PLP P+ KKI++G
Sbjct: 86  ASIFIPLPCPVIKKIRVG 103


>emb|CBW30177.1| Conserved hypothetical protein [Musa balbisiana]
          Length = 104

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 31/77 (40%), Positives = 41/77 (53%)
 Frame = -2

Query: 475 QDWPSKPTDNEEEEHVTPRSTSEKQGKLVCXXXXXXXXXXXXKSEAPPGGYFTTVPDDLA 296
           Q+ PSK T +EE E VTP+S      + +             +   PP   F  VP DLA
Sbjct: 27  QEDPSKSTSSEEGECVTPKSEQHAVKRPLVCPSAPRKPRPVKRKLQPPADGFCPVPSDLA 86

Query: 295 SIFVPLPHPLNKKIQLG 245
           SIF+PLP P+ KKI++G
Sbjct: 87  SIFIPLPCPVIKKIRVG 103


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