BLASTX nr result
ID: Cheilocostus21_contig00027867
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00027867
(734 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009389497.1| PREDICTED: mediator of RNA polymerase II tra... 224 1e-65
gb|AIU49724.1| RNA polymerase II transcription mediator, partial... 183 3e-51
ref|XP_020705847.1| mediator of RNA polymerase II transcription ... 174 2e-47
gb|PKU61903.1| Mediator of RNA polymerase II transcription subun... 174 6e-47
ref|XP_020705846.1| mediator of RNA polymerase II transcription ... 174 1e-46
gb|AIU49747.1| RNA polymerase II transcription mediator, partial... 171 2e-46
ref|XP_017701742.1| PREDICTED: mediator of RNA polymerase II tra... 171 2e-46
ref|XP_010910117.1| PREDICTED: mediator of RNA polymerase II tra... 173 2e-46
ref|XP_020105883.1| mediator of RNA polymerase II transcription ... 171 3e-46
ref|XP_008809751.1| PREDICTED: mediator of RNA polymerase II tra... 171 9e-46
ref|XP_020105882.1| mediator of RNA polymerase II transcription ... 171 1e-45
gb|AIU49743.1| RNA polymerase II transcription mediator, partial... 161 1e-44
gb|PKA64682.1| Mediator of RNA polymerase II transcription subun... 167 4e-44
gb|AIU49772.1| RNA polymerase II transcription mediator, partial... 162 2e-43
gb|AIU49729.1| RNA polymerase II transcription mediator, partial... 162 5e-43
ref|XP_010254371.1| PREDICTED: mediator of RNA polymerase II tra... 162 2e-42
gb|AIU49740.1| RNA polymerase II transcription mediator, partial... 159 7e-42
ref|XP_020572318.1| mediator of RNA polymerase II transcription ... 157 3e-41
gb|AIU49757.1| RNA polymerase II transcription mediator, partial... 156 5e-41
ref|XP_020572316.1| mediator of RNA polymerase II transcription ... 157 9e-41
>ref|XP_009389497.1| PREDICTED: mediator of RNA polymerase II transcription subunit 17
[Musa acuminata subsp. malaccensis]
Length = 672
Score = 224 bits (572), Expect = 1e-65
Identities = 115/181 (63%), Positives = 125/181 (69%)
Frame = -1
Query: 734 SVFSTASLSKHPNSSDEKGLIRSQFHXXXXXXXXXXXVSGEGGLGTVNSFRGXXXXXXXX 555
S+F LSKHPN D K L RSQFH VSGEG G ++SFRG
Sbjct: 489 SIFHAGCLSKHPNIYDVKHLTRSQFHTKIVVKDDQVTVSGEGAPGILSSFRGISADVFSV 548
Query: 554 XSYGCDLEDXXXXXXXXXXXXXIRWLHEEALVVGMKVNRDFLCLYFDLDQGDMLGLVARV 375
YGCDL+D I WLHEEALVVGMKV+RDFLCLYFD+DQGDMLGLVA V
Sbjct: 549 SCYGCDLDDLPLVLLQQIAGQIIHWLHEEALVVGMKVSRDFLCLYFDVDQGDMLGLVAHV 608
Query: 374 DPDDVDGCISWWLIMEDGLAEDGKLSAKAGAYENRRFLGHLSLEELYSILMDLVNLSSSA 195
DP+DVDGCISWWLIMEDGL EDGK S + G YENRRFLGHLSLE LYS+LMDLVNL SS
Sbjct: 609 DPNDVDGCISWWLIMEDGLTEDGKFSREKGEYENRRFLGHLSLEALYSLLMDLVNLCSST 668
Query: 194 S 192
+
Sbjct: 669 T 669
>gb|AIU49724.1| RNA polymerase II transcription mediator, partial [Musa acuminata]
Length = 515
Score = 183 bits (465), Expect = 3e-51
Identities = 106/176 (60%), Positives = 115/176 (65%), Gaps = 1/176 (0%)
Frame = -1
Query: 725 STASLS-KHPNSSDEKGLIRSQFHXXXXXXXXXXXVSGEGGLGTVNSFRGXXXXXXXXXS 549
S+ SLS K P+S G RSQFH VSGEG G ++SFRG
Sbjct: 350 SSWSLSLKFPDSIFHAG--RSQFHTKIVVKDDQVTVSGEGAPGILSSFRGISADVFSVSC 407
Query: 548 YGCDLEDXXXXXXXXXXXXXIRWLHEEALVVGMKVNRDFLCLYFDLDQGDMLGLVARVDP 369
YGCDL+D I WLHEEALVVGMKV+RDFLCLYFD+DQGDMLGLVA VDP
Sbjct: 408 YGCDLDDLPLVLLQQIAGQIIHWLHEEALVVGMKVSRDFLCLYFDVDQGDMLGLVAHVDP 467
Query: 368 DDVDGCISWWLIMEDGLAEDGKLSAKAGAYENRRFLGHLSLEELYSILMDLVNLSS 201
+DVDGCISWWLIMEDG EDGK S RRFLGHLSLE LYS+LMDLVNL S
Sbjct: 468 NDVDGCISWWLIMEDG--EDGKFS------RERRFLGHLSLEALYSLLMDLVNLCS 515
>ref|XP_020705847.1| mediator of RNA polymerase II transcription subunit 17 isoform X2
[Dendrobium catenatum]
Length = 546
Score = 174 bits (440), Expect = 2e-47
Identities = 96/183 (52%), Positives = 112/183 (61%), Gaps = 1/183 (0%)
Frame = -1
Query: 734 SVFSTASLSKHPNSSDEKGLIRSQFHXXXXXXXXXXXVSGEGGLGTVNSFRGXXXXXXXX 555
S+ ++ K S+D K IRSQF+ VSGEG G V S RG
Sbjct: 364 SILRSSRRIKPSGSNDLKSGIRSQFNTKVVVNDDQINVSGEGTPGLVGSLRGDYSDSCSI 423
Query: 554 XSYGCDLEDXXXXXXXXXXXXXIRWLHEEALVVGMKVNRDFLCLYFDLDQGDMLGLVARV 375
SYGCDL D I WLHEEAL+VGMKV+RDFLCLYFDL+QG+ LGLVA V
Sbjct: 424 NSYGCDLVDLPVAILHQVANQVIDWLHEEALIVGMKVSRDFLCLYFDLEQGETLGLVANV 483
Query: 374 DPDDVDGCISWWLIMEDGLAEDGKLSAKAGAYENRRFLGHLSLEELYSILMDLVNL-SSS 198
D +D GCISWWL+ +DG E+GKL+A+ + NRRFLGHLSLE LYS LMDLV S
Sbjct: 484 DAEDTHGCISWWLVFDDGSMEEGKLAAEDVEFRNRRFLGHLSLEALYSTLMDLVGFCGSG 543
Query: 197 ASH 189
SH
Sbjct: 544 GSH 546
>gb|PKU61903.1| Mediator of RNA polymerase II transcription subunit 17 [Dendrobium
catenatum]
Length = 612
Score = 174 bits (440), Expect = 6e-47
Identities = 96/183 (52%), Positives = 112/183 (61%), Gaps = 1/183 (0%)
Frame = -1
Query: 734 SVFSTASLSKHPNSSDEKGLIRSQFHXXXXXXXXXXXVSGEGGLGTVNSFRGXXXXXXXX 555
S+ ++ K S+D K IRSQF+ VSGEG G V S RG
Sbjct: 430 SILRSSRRIKPSGSNDLKSGIRSQFNTKVVVNDDQINVSGEGTPGLVGSLRGDYSDSCSI 489
Query: 554 XSYGCDLEDXXXXXXXXXXXXXIRWLHEEALVVGMKVNRDFLCLYFDLDQGDMLGLVARV 375
SYGCDL D I WLHEEAL+VGMKV+RDFLCLYFDL+QG+ LGLVA V
Sbjct: 490 NSYGCDLVDLPVAILHQVANQVIDWLHEEALIVGMKVSRDFLCLYFDLEQGETLGLVANV 549
Query: 374 DPDDVDGCISWWLIMEDGLAEDGKLSAKAGAYENRRFLGHLSLEELYSILMDLVNL-SSS 198
D +D GCISWWL+ +DG E+GKL+A+ + NRRFLGHLSLE LYS LMDLV S
Sbjct: 550 DAEDTHGCISWWLVFDDGSMEEGKLAAEDVEFRNRRFLGHLSLEALYSTLMDLVGFCGSG 609
Query: 197 ASH 189
SH
Sbjct: 610 GSH 612
>ref|XP_020705846.1| mediator of RNA polymerase II transcription subunit 17 isoform X1
[Dendrobium catenatum]
Length = 652
Score = 174 bits (440), Expect = 1e-46
Identities = 96/183 (52%), Positives = 112/183 (61%), Gaps = 1/183 (0%)
Frame = -1
Query: 734 SVFSTASLSKHPNSSDEKGLIRSQFHXXXXXXXXXXXVSGEGGLGTVNSFRGXXXXXXXX 555
S+ ++ K S+D K IRSQF+ VSGEG G V S RG
Sbjct: 470 SILRSSRRIKPSGSNDLKSGIRSQFNTKVVVNDDQINVSGEGTPGLVGSLRGDYSDSCSI 529
Query: 554 XSYGCDLEDXXXXXXXXXXXXXIRWLHEEALVVGMKVNRDFLCLYFDLDQGDMLGLVARV 375
SYGCDL D I WLHEEAL+VGMKV+RDFLCLYFDL+QG+ LGLVA V
Sbjct: 530 NSYGCDLVDLPVAILHQVANQVIDWLHEEALIVGMKVSRDFLCLYFDLEQGETLGLVANV 589
Query: 374 DPDDVDGCISWWLIMEDGLAEDGKLSAKAGAYENRRFLGHLSLEELYSILMDLVNL-SSS 198
D +D GCISWWL+ +DG E+GKL+A+ + NRRFLGHLSLE LYS LMDLV S
Sbjct: 590 DAEDTHGCISWWLVFDDGSMEEGKLAAEDVEFRNRRFLGHLSLEALYSTLMDLVGFCGSG 649
Query: 197 ASH 189
SH
Sbjct: 650 GSH 652
>gb|AIU49747.1| RNA polymerase II transcription mediator, partial [Canna indica]
Length = 516
Score = 171 bits (433), Expect = 2e-46
Identities = 92/157 (58%), Positives = 105/157 (66%)
Frame = -1
Query: 671 RSQFHXXXXXXXXXXXVSGEGGLGTVNSFRGXXXXXXXXXSYGCDLEDXXXXXXXXXXXX 492
RSQFH VSG+G L T+ SF+G S+GCDLED
Sbjct: 368 RSQFHTKVVVKDDQITVSGQGALCTLGSFKGSSADASSVSSHGCDLEDLPLVILQQIAGQ 427
Query: 491 XIRWLHEEALVVGMKVNRDFLCLYFDLDQGDMLGLVARVDPDDVDGCISWWLIMEDGLAE 312
I WLHEEA+VVGMK NRDFLCLY DLDQGD+LGLVA VDPDD++GCISWWLI+EDG E
Sbjct: 428 IIHWLHEEAMVVGMKANRDFLCLYVDLDQGDVLGLVAHVDPDDINGCISWWLILEDG--E 485
Query: 311 DGKLSAKAGAYENRRFLGHLSLEELYSILMDLVNLSS 201
DGK S +R+FLG+LSLE LYSILMDLVN+ S
Sbjct: 486 DGKFST------DRKFLGYLSLEGLYSILMDLVNICS 516
>ref|XP_017701742.1| PREDICTED: mediator of RNA polymerase II transcription subunit 17
isoform X2 [Phoenix dactylifera]
Length = 538
Score = 171 bits (434), Expect = 2e-46
Identities = 90/158 (56%), Positives = 101/158 (63%)
Frame = -1
Query: 674 IRSQFHXXXXXXXXXXXVSGEGGLGTVNSFRGXXXXXXXXXSYGCDLEDXXXXXXXXXXX 495
+RSQFH VSGEG + SFRG YGCDLED
Sbjct: 377 MRSQFHTKVVVKDDQINVSGEGAPSIICSFRGSSSDVFSMNCYGCDLEDLPMILLQQVAS 436
Query: 494 XXIRWLHEEALVVGMKVNRDFLCLYFDLDQGDMLGLVARVDPDDVDGCISWWLIMEDGLA 315
IRWLHEEALVVGMK +RDFLCLYFDLD GD LGLVA VDPDD++GCISWW++M+DG A
Sbjct: 437 QVIRWLHEEALVVGMKASRDFLCLYFDLDHGDTLGLVAHVDPDDINGCISWWVVMDDGSA 496
Query: 314 EDGKLSAKAGAYENRRFLGHLSLEELYSILMDLVNLSS 201
E GK G E RRFLGHLSLE LY+ +MDL +L S
Sbjct: 497 E-GKKLTDYGESEGRRFLGHLSLEALYATVMDLASLCS 533
>ref|XP_010910117.1| PREDICTED: mediator of RNA polymerase II transcription subunit 17
[Elaeis guineensis]
Length = 675
Score = 173 bits (438), Expect = 2e-46
Identities = 95/178 (53%), Positives = 111/178 (62%)
Frame = -1
Query: 734 SVFSTASLSKHPNSSDEKGLIRSQFHXXXXXXXXXXXVSGEGGLGTVNSFRGXXXXXXXX 555
SV SK ++ + K +RSQFH VSGEG + SFRG
Sbjct: 494 SVLHAGRCSKILDNHNLKHGMRSQFHTKVVVKDDQINVSGEGAPSIICSFRGSSDDVCSL 553
Query: 554 XSYGCDLEDXXXXXXXXXXXXXIRWLHEEALVVGMKVNRDFLCLYFDLDQGDMLGLVARV 375
S+GCDLED IRWLHEEALVVGMK +RDFLCLYF LD GD LGLVA V
Sbjct: 554 NSFGCDLEDLPMILLQQVASQVIRWLHEEALVVGMKASRDFLCLYFGLDHGDTLGLVAHV 613
Query: 374 DPDDVDGCISWWLIMEDGLAEDGKLSAKAGAYENRRFLGHLSLEELYSILMDLVNLSS 201
DPDD++GCISWW++M+DGL E GK + G E+RRFLGHLSLE LY+ +MDL NL S
Sbjct: 614 DPDDINGCISWWVVMDDGLVE-GKNLTEYGESESRRFLGHLSLEALYATVMDLANLCS 670
>ref|XP_020105883.1| mediator of RNA polymerase II transcription subunit 17 isoform X2
[Ananas comosus]
Length = 557
Score = 171 bits (433), Expect = 3e-46
Identities = 88/162 (54%), Positives = 103/162 (63%)
Frame = -1
Query: 674 IRSQFHXXXXXXXXXXXVSGEGGLGTVNSFRGXXXXXXXXXSYGCDLEDXXXXXXXXXXX 495
IRSQFH V+GEG V SF G +GCDLED
Sbjct: 395 IRSQFHTKVILKDDQISVTGEGSPSIVGSFNGNYSDLCLINCFGCDLEDLPMILLQQIAG 454
Query: 494 XXIRWLHEEALVVGMKVNRDFLCLYFDLDQGDMLGLVARVDPDDVDGCISWWLIMEDGLA 315
I WLHEEALVVGM +RDFLCLYFDLDQGD LGLVA VDPDDV GCISWW+++E+
Sbjct: 455 QVIHWLHEEALVVGMNASRDFLCLYFDLDQGDTLGLVAHVDPDDVYGCISWWVVLENWSM 514
Query: 314 EDGKLSAKAGAYENRRFLGHLSLEELYSILMDLVNLSSSASH 189
E+GKLS G ENR+FLG+LSLE LYS +MDL++L S+ +
Sbjct: 515 EEGKLSTGNGESENRKFLGYLSLEALYSTVMDLISLCSAGGN 556
>ref|XP_008809751.1| PREDICTED: mediator of RNA polymerase II transcription subunit 17
isoform X1 [Phoenix dactylifera]
Length = 671
Score = 171 bits (434), Expect = 9e-46
Identities = 90/158 (56%), Positives = 101/158 (63%)
Frame = -1
Query: 674 IRSQFHXXXXXXXXXXXVSGEGGLGTVNSFRGXXXXXXXXXSYGCDLEDXXXXXXXXXXX 495
+RSQFH VSGEG + SFRG YGCDLED
Sbjct: 510 MRSQFHTKVVVKDDQINVSGEGAPSIICSFRGSSSDVFSMNCYGCDLEDLPMILLQQVAS 569
Query: 494 XXIRWLHEEALVVGMKVNRDFLCLYFDLDQGDMLGLVARVDPDDVDGCISWWLIMEDGLA 315
IRWLHEEALVVGMK +RDFLCLYFDLD GD LGLVA VDPDD++GCISWW++M+DG A
Sbjct: 570 QVIRWLHEEALVVGMKASRDFLCLYFDLDHGDTLGLVAHVDPDDINGCISWWVVMDDGSA 629
Query: 314 EDGKLSAKAGAYENRRFLGHLSLEELYSILMDLVNLSS 201
E GK G E RRFLGHLSLE LY+ +MDL +L S
Sbjct: 630 E-GKKLTDYGESEGRRFLGHLSLEALYATVMDLASLCS 666
>ref|XP_020105882.1| mediator of RNA polymerase II transcription subunit 17 isoform X1
[Ananas comosus]
gb|OAY84693.1| Mediator of RNA polymerase II transcription subunit 17 [Ananas
comosus]
Length = 674
Score = 171 bits (433), Expect = 1e-45
Identities = 88/162 (54%), Positives = 103/162 (63%)
Frame = -1
Query: 674 IRSQFHXXXXXXXXXXXVSGEGGLGTVNSFRGXXXXXXXXXSYGCDLEDXXXXXXXXXXX 495
IRSQFH V+GEG V SF G +GCDLED
Sbjct: 512 IRSQFHTKVILKDDQISVTGEGSPSIVGSFNGNYSDLCLINCFGCDLEDLPMILLQQIAG 571
Query: 494 XXIRWLHEEALVVGMKVNRDFLCLYFDLDQGDMLGLVARVDPDDVDGCISWWLIMEDGLA 315
I WLHEEALVVGM +RDFLCLYFDLDQGD LGLVA VDPDDV GCISWW+++E+
Sbjct: 572 QVIHWLHEEALVVGMNASRDFLCLYFDLDQGDTLGLVAHVDPDDVYGCISWWVVLENWSM 631
Query: 314 EDGKLSAKAGAYENRRFLGHLSLEELYSILMDLVNLSSSASH 189
E+GKLS G ENR+FLG+LSLE LYS +MDL++L S+ +
Sbjct: 632 EEGKLSTGNGESENRKFLGYLSLEALYSTVMDLISLCSAGGN 673
>gb|AIU49743.1| RNA polymerase II transcription mediator, partial [Pandanus utilis]
Length = 306
Score = 161 bits (407), Expect = 1e-44
Identities = 94/175 (53%), Positives = 106/175 (60%)
Frame = -1
Query: 725 STASLSKHPNSSDEKGLIRSQFHXXXXXXXXXXXVSGEGGLGTVNSFRGXXXXXXXXXSY 546
S + L K P S G R QFH VSGEG + SFRG SY
Sbjct: 143 SWSLLLKVPQSILHSG--RLQFHTKVLVNDDQISVSGEGAPNIIGSFRGSSMDICTMNSY 200
Query: 545 GCDLEDXXXXXXXXXXXXXIRWLHEEALVVGMKVNRDFLCLYFDLDQGDMLGLVARVDPD 366
GCDLED I WLHEEAL VGMKVN+DFLC+YF+LDQGD LGLVA VDPD
Sbjct: 201 GCDLEDLPMILLQQVASQVICWLHEEALEVGMKVNKDFLCMYFELDQGDALGLVAHVDPD 260
Query: 365 DVDGCISWWLIMEDGLAEDGKLSAKAGAYENRRFLGHLSLEELYSILMDLVNLSS 201
D+ GCISWW++M++G + KLSA NRRFLGHLSLE LYS LMDLV+ S
Sbjct: 261 DMQGCISWWVVMDNG---EEKLSA------NRRFLGHLSLEALYSTLMDLVSFCS 306
>gb|PKA64682.1| Mediator of RNA polymerase II transcription subunit 17 [Apostasia
shenzhenica]
Length = 662
Score = 167 bits (422), Expect = 4e-44
Identities = 85/162 (52%), Positives = 105/162 (64%)
Frame = -1
Query: 674 IRSQFHXXXXXXXXXXXVSGEGGLGTVNSFRGXXXXXXXXXSYGCDLEDXXXXXXXXXXX 495
+RSQFH VSGE V S RG SYGC+L D
Sbjct: 501 VRSQFHTKIVVNDDQIIVSGECAASIVGSLRGNCLEACSINSYGCNLVDLPMVILQQVAG 560
Query: 494 XXIRWLHEEALVVGMKVNRDFLCLYFDLDQGDMLGLVARVDPDDVDGCISWWLIMEDGLA 315
I W++EEA+VVGMKV+RDFLCLYF+LD G+ LGLVA VD +D++GCISWWL+ +DG
Sbjct: 561 QVIHWIYEEAMVVGMKVSRDFLCLYFELDHGETLGLVANVDAEDIEGCISWWLVFDDGSM 620
Query: 314 EDGKLSAKAGAYENRRFLGHLSLEELYSILMDLVNLSSSASH 189
E+GKL+ + G +NRRFLGHLSLE L+S LMDLV+L S+ SH
Sbjct: 621 EEGKLAGEDGDCKNRRFLGHLSLEALHSTLMDLVSLCSAGSH 662
>gb|AIU49772.1| RNA polymerase II transcription mediator, partial [Trachycarpus
fortunei]
Length = 471
Score = 162 bits (410), Expect = 2e-43
Identities = 96/176 (54%), Positives = 107/176 (60%), Gaps = 1/176 (0%)
Frame = -1
Query: 725 STASLS-KHPNSSDEKGLIRSQFHXXXXXXXXXXXVSGEGGLGTVNSFRGXXXXXXXXXS 549
S+ SLS K P S G +SQFH VSGEG + SFRG
Sbjct: 307 SSWSLSLKVPQSVLHAG--KSQFHTKVVVKDDQVNVSGEGAPSILCSFRGSSSDVFSMNC 364
Query: 548 YGCDLEDXXXXXXXXXXXXXIRWLHEEALVVGMKVNRDFLCLYFDLDQGDMLGLVARVDP 369
YGCDLED IRWLHEEALVVGMK +RDFLCLYFDLD GD LGLVA VDP
Sbjct: 365 YGCDLEDLPMILLQQVASQVIRWLHEEALVVGMKASRDFLCLYFDLDHGDTLGLVAHVDP 424
Query: 368 DDVDGCISWWLIMEDGLAEDGKLSAKAGAYENRRFLGHLSLEELYSILMDLVNLSS 201
DD+DGCISWW++M+DG AE KL RRFLGHLSLE LY+ +MDL +L S
Sbjct: 425 DDIDGCISWWVVMDDG-AEGKKLM--------RRFLGHLSLEALYATVMDLASLCS 471
>gb|AIU49729.1| RNA polymerase II transcription mediator, partial [Sarcandra
glabra]
Length = 519
Score = 162 bits (409), Expect = 5e-43
Identities = 88/157 (56%), Positives = 99/157 (63%)
Frame = -1
Query: 671 RSQFHXXXXXXXXXXXVSGEGGLGTVNSFRGXXXXXXXXXSYGCDLEDXXXXXXXXXXXX 492
RSQFH V GEG V+ FRG Y CDL D
Sbjct: 370 RSQFHTKVVVNDECINVGGEGSPNVVSVFRGSSVDDCLINCYDCDLADIPVILLQQVASQ 429
Query: 491 XIRWLHEEALVVGMKVNRDFLCLYFDLDQGDMLGLVARVDPDDVDGCISWWLIMEDGLAE 312
IRWLHEEALVVGMK +RDFLCL F+L+QGD LGLVA VDPDDV GCISWW++MEDG E
Sbjct: 430 VIRWLHEEALVVGMKASRDFLCLSFELEQGDTLGLVAHVDPDDVQGCISWWMVMEDG--E 487
Query: 311 DGKLSAKAGAYENRRFLGHLSLEELYSILMDLVNLSS 201
+GK+ + +NRRFLGHLSLE LYS LMDLV+L S
Sbjct: 488 EGKVHS-----DNRRFLGHLSLEALYSTLMDLVSLCS 519
>ref|XP_010254371.1| PREDICTED: mediator of RNA polymerase II transcription subunit 17
[Nelumbo nucifera]
Length = 667
Score = 162 bits (410), Expect = 2e-42
Identities = 88/185 (47%), Positives = 109/185 (58%), Gaps = 3/185 (1%)
Frame = -1
Query: 734 SVFSTASLSKHPNSSDEKGLIRSQFHXXXXXXXXXXXVSGEGGLGTVNSFRGXXXXXXXX 555
S+ ++ + K +RSQF + GEG V F+G
Sbjct: 480 SILHAGHRTRPSDMRSTKSAVRSQFITKVVVNDDCINIEGEGAPNVVGLFKGSAEDICSM 539
Query: 554 XSYGCDLEDXXXXXXXXXXXXXIRWLHEEALVVGMKVNRDFLCLYFDLDQGDMLGLVARV 375
SY C+L D +RWLHEEAL+VGMK +RDFLCL F+LDQG+ LGLVA V
Sbjct: 540 NSYDCNLPDLPVILLQQVASQVVRWLHEEALLVGMKASRDFLCLSFELDQGETLGLVAHV 599
Query: 374 DPDDVDGCISWWLIMEDGLAEDGKLSA--KAGAYENRRFLGHLSLEELYSILMDLVNL-S 204
DP+D+ GCISWWL+M+DGL E+GKL + A + RRFLGHLSLE LYS LMDLV L +
Sbjct: 600 DPEDIQGCISWWLVMDDGLMEEGKLHTDFSSDASDTRRFLGHLSLEALYSTLMDLVTLCN 659
Query: 203 SSASH 189
SS SH
Sbjct: 660 SSGSH 664
>gb|AIU49740.1| RNA polymerase II transcription mediator, partial [Chloranthus
japonicus]
Length = 520
Score = 159 bits (401), Expect = 7e-42
Identities = 87/157 (55%), Positives = 99/157 (63%)
Frame = -1
Query: 671 RSQFHXXXXXXXXXXXVSGEGGLGTVNSFRGXXXXXXXXXSYGCDLEDXXXXXXXXXXXX 492
RSQFH V GEG V+ FR Y CDL D
Sbjct: 371 RSQFHTKVVVNDECINVGGEGSPNVVSVFRDSSVDDCLINCYDCDLADLPVILLQQVASQ 430
Query: 491 XIRWLHEEALVVGMKVNRDFLCLYFDLDQGDMLGLVARVDPDDVDGCISWWLIMEDGLAE 312
IRWLHEEALVVGMK +RDFLCL F+L+QGD LGLVA VDPDDV GCISW+++MEDG E
Sbjct: 431 VIRWLHEEALVVGMKASRDFLCLSFELEQGDTLGLVAHVDPDDVQGCISWYMVMEDG--E 488
Query: 311 DGKLSAKAGAYENRRFLGHLSLEELYSILMDLVNLSS 201
+GK+ +NRRFLGHLSLEELYS+LMDLV+L S
Sbjct: 489 EGKVHT-----DNRRFLGHLSLEELYSLLMDLVSLCS 520
>ref|XP_020572318.1| mediator of RNA polymerase II transcription subunit 17 isoform X2
[Phalaenopsis equestris]
Length = 555
Score = 157 bits (398), Expect = 3e-41
Identities = 88/170 (51%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = -1
Query: 695 SSDEKGLIRSQFHXXXXXXXXXXXVSGEGGLGTVNSFRGXXXXXXXXXSYGCDLEDXXXX 516
S+D K IRSQF+ VSGEG G S RG SYGCDL D
Sbjct: 386 SNDLKSGIRSQFNTKVVVNDDQISVSGEGTPGIAGSLRGDFTDSWSVNSYGCDLVDLPMV 445
Query: 515 XXXXXXXXXIRWLHEEALVVGMKVNRDFLCLYFDLDQGDMLGLVARVDPDDVDGCISWWL 336
I WLHEEAL+VGMKV+R FLCLYFDLDQG+ LGL+A VD +DV+G ISWWL
Sbjct: 446 ILHQVANQIIHWLHEEALIVGMKVSRAFLCLYFDLDQGETLGLLANVDAEDVEGFISWWL 505
Query: 335 IMEDGLAEDGKLSAKAGAYENRRFLGHLSLEELYSILMDLVNL-SSSASH 189
+ +DG E+G L+ + NR FLGHLSLE LYS LMD V+ S SH
Sbjct: 506 VFDDGSMEEGNLAENSVESRNRIFLGHLSLEALYSTLMDFVSFCGSGGSH 555
>gb|AIU49757.1| RNA polymerase II transcription mediator, partial [Dioscorea
oppositifolia]
Length = 517
Score = 156 bits (395), Expect = 5e-41
Identities = 86/157 (54%), Positives = 97/157 (61%)
Frame = -1
Query: 671 RSQFHXXXXXXXXXXXVSGEGGLGTVNSFRGXXXXXXXXXSYGCDLEDXXXXXXXXXXXX 492
R QFH VSGEG ++SFRG YGCDLED
Sbjct: 369 RLQFHTKVVVNDEQINVSGEGAPSIISSFRGSSTDICAMNFYGCDLEDLAIILLQQVAGQ 428
Query: 491 XIRWLHEEALVVGMKVNRDFLCLYFDLDQGDMLGLVARVDPDDVDGCISWWLIMEDGLAE 312
I WLHEEAL VGM V++DFLCL+F LDQGD LGLVA VDPDDV GCISWW++M+D E
Sbjct: 429 VICWLHEEALEVGMNVHKDFLCLFFLLDQGDALGLVAHVDPDDVQGCISWWVVMDD--CE 486
Query: 311 DGKLSAKAGAYENRRFLGHLSLEELYSILMDLVNLSS 201
+GKL NRRFLGHLSLE LY+ LMDLV+L S
Sbjct: 487 EGKLPT------NRRFLGHLSLEALYTTLMDLVSLCS 517
>ref|XP_020572316.1| mediator of RNA polymerase II transcription subunit 17 isoform X1
[Phalaenopsis equestris]
Length = 661
Score = 157 bits (398), Expect = 9e-41
Identities = 88/170 (51%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = -1
Query: 695 SSDEKGLIRSQFHXXXXXXXXXXXVSGEGGLGTVNSFRGXXXXXXXXXSYGCDLEDXXXX 516
S+D K IRSQF+ VSGEG G S RG SYGCDL D
Sbjct: 492 SNDLKSGIRSQFNTKVVVNDDQISVSGEGTPGIAGSLRGDFTDSWSVNSYGCDLVDLPMV 551
Query: 515 XXXXXXXXXIRWLHEEALVVGMKVNRDFLCLYFDLDQGDMLGLVARVDPDDVDGCISWWL 336
I WLHEEAL+VGMKV+R FLCLYFDLDQG+ LGL+A VD +DV+G ISWWL
Sbjct: 552 ILHQVANQIIHWLHEEALIVGMKVSRAFLCLYFDLDQGETLGLLANVDAEDVEGFISWWL 611
Query: 335 IMEDGLAEDGKLSAKAGAYENRRFLGHLSLEELYSILMDLVNL-SSSASH 189
+ +DG E+G L+ + NR FLGHLSLE LYS LMD V+ S SH
Sbjct: 612 VFDDGSMEEGNLAENSVESRNRIFLGHLSLEALYSTLMDFVSFCGSGGSH 661