BLASTX nr result

ID: Cheilocostus21_contig00027855 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00027855
         (614 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009387866.1| PREDICTED: zinc finger CCCH domain-containin...    70   2e-10

>ref|XP_009387866.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like [Musa
            acuminata subsp. malaccensis]
          Length = 1689

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 57/205 (27%), Positives = 80/205 (39%), Gaps = 4/205 (1%)
 Frame = +2

Query: 11   GLDIDSVQNTDCCGTNIASSVCRLGQTRIENPSYISAPRDVLKDIKSTESSYGWNVAVHS 190
            GLD +  +N +C     + S C L  T++ +P+  S P              G  +A+ S
Sbjct: 1384 GLDQNQAKNLEC----FSGSKCVLEDTKLPSPTPASEPS-------------GRVLAIDS 1426

Query: 191  TTNKSQIDVXXXXXXXXXXXXXNLQGTCTESAGMRNHTSGMVEDAGNRNWVTAPNPSTCG 370
            T+ KSQ D                    T  A   N  S M E A ++ W          
Sbjct: 1427 TSGKSQSDTLGLSDVFVSPLSPIRSDPSTGPAAFGNPASSMAEGASDQGWT--------- 1477

Query: 371  VAYGTGVLGWGKGDQSKASTINRVFAQGCSNVAWETA--QETSTETGRIMPKQNSSNVNI 544
                                      QG +N+ W  +  ++TSTETG +MPKQ  ++ N 
Sbjct: 1478 --------------------------QGSANIIWGISGQRQTSTETGWMMPKQKRTSANT 1511

Query: 545  GWATPAQGNSTMDLG--AQGNVNMN 613
             W TPAQGN   +LG   QGN+N N
Sbjct: 1512 SWVTPAQGNREENLGWVTQGNMNPN 1536


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