BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00027759
         (2036 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020676930.1| uncharacterized protein LOC110095647 [Dendro...   270   e-113
gb|ANK58548.1| polyprotein [Fig badnavirus 1]                         271   e-112
gb|ANK58542.1| polyprotein [Fig badnavirus 1]                         271   e-112
gb|ANK58539.1| polyprotein [Fig badnavirus 1]                         268   e-111
ref|YP_009130664.1| polyprotein [Taro bacilliform CH virus] >gi|...   270   e-111
gb|ANK58545.1| polyprotein [Fig badnavirus 1]                         268   e-111
gb|ANK58536.1| polyprotein [Fig badnavirus 1]                         266   e-110
ref|YP_006273075.1| polyprotein [Fig badnavirus 1] >gi|333493962...   270   e-110
gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]                   272   e-110
gb|AKA45798.1| polyprotein [Taro bacilliform CH virus]                267   e-108
ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]...   258   e-107
gb|ASG91840.1| polyprotein [Cacao swollen shoot virus]                257   e-106
gb|ASG91836.1| polyprotein [Cacao swollen shoot virus]                256   e-105
gb|ATZ69463.1| ORF3 polyprotein [Cacao swollen shoot CE virus]        257   e-105
gb|ASA40116.1| ORF3 [Dioscorea bacilliform RT virus 2]                263   e-105
gb|ATZ69477.1| ORF3 polyprotein [Cacao swollen shoot Ghana L virus]   253   e-105
gb|ANV20896.1| ORF3 protein [Dioscorea bacilliform RT virus]          263   e-104
gb|ATZ69472.1| ORF3 polyprotein [Cacao swollen shoot Ghana K virus]   258   e-104
gb|ASG91844.1| polyprotein [Cacao swollen shoot virus]                249   e-104
gb|AHG94942.1| ORF3, partial [Dioscorea bacilliform virus]            253   e-104

>ref|XP_020676930.1| uncharacterized protein LOC110095647 [Dendrobium catenatum]
          Length = 517

 Score =  270 bits (691), Expect(2) = e-113
 Identities = 130/220 (59%), Positives = 166/220 (75%), Gaps = 6/220 (2%)
 Frame = -1

Query: 1679 SSAISEYRPPT-DSTMGPVNYPPAASGSNIMD----RRPFQEDYKFKG-KFQARNPRDEW 1518
            +S +S Y PP  D++MGP +YPPA +  ++ +     RP   DY  +G +F+++N  +EW
Sbjct: 5    NSVVSNYTPPQMDASMGPPSYPPARTNGSLENPYRPTRPDHGDYDRRGVRFKSKNYSEEW 64

Query: 1517 NLPSALHQHGAIFIIPQQLGLFDEAFMRWESITKNLVSLQNFTDPQSKTEFIENLLGESE 1338
            +LPSA HQ+GAI  IP  LG FDE F+RWESITKNLVSLQ FTD   K EFIENLLGE+E
Sbjct: 65   DLPSAHHQNGAILTIPTNLGAFDEVFLRWESITKNLVSLQGFTDNNDKAEFIENLLGEAE 124

Query: 1337 KLVWIQWRMTYPAEYQQLLANADGVSGTQNIISQIRTVFTLEDPYQGSTAVQEEAYRDLE 1158
             L W+QWRM +P EYQ  +  ADG  GTQNIISQIR +F LEDPYQGST +Q+EAYRD+E
Sbjct: 125  NLTWMQWRMAFPNEYQTTINTADGREGTQNIISQIRRIFMLEDPYQGSTLIQDEAYRDIE 184

Query: 1157 RLTCGNLKNIIQFLNDYMRLASKTGRLFTGPELSENYGLK 1038
            RL+C NLK+++QF+N+YMR+A+KTGR+FT PE SE +  K
Sbjct: 185  RLSCNNLKDVLQFMNEYMRIAAKTGRMFTSPERSEKFWSK 224



 Score =  169 bits (428), Expect(2) = e-113
 Identities = 75/107 (70%), Positives = 88/107 (82%)
 Frame = -3

Query: 1053 KLWSKMPGDLGKKIRQAFHEKYVGNSVGVFPRVLFACKYLENECKDAAFKRALKDLSFCS 874
            K WSK+PGDLG +I+ AF  +Y GN VGV PR+LF  +YLENECK+A F RALK L FC+
Sbjct: 220  KFWSKLPGDLGSRIKMAFDTRYSGNQVGVIPRILFTYRYLENECKEATFHRALKGLQFCN 279

Query: 873  NIPIPGYYQRPEK*FGIRRSKTFKGKPHPSHARIEKKKHLIRNRKCK 733
             IPIPGYY++PEK +GIRRS T+KGKPH SHARIEKKKHLIRN+ CK
Sbjct: 280  QIPIPGYYKKPEKKYGIRRSTTYKGKPHNSHARIEKKKHLIRNKNCK 326


>gb|ANK58548.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  271 bits (694), Expect(2) = e-112
 Identities = 154/342 (45%), Positives = 208/342 (60%), Gaps = 21/342 (6%)
 Frame = -1

Query: 2000 WDTRGEPSGKYDYIVRYSAPSYVT-------TEWPNPIKSSWGDEEEEENKVKIKGLGW- 1845
            WDT GEPSGKYDY VRY+AP   T       T W    K  W D  +E++   I+   + 
Sbjct: 377  WDTLGEPSGKYDYYVRYTAPPATTPIEDIQPTGWEEEPK--WDDSPDEKSLATIRFEEYK 434

Query: 1844 --QPTWDDTPWXXXXXXXXXXXXXXXXTKGIIAAGVEDSEWIT----DYPKLAQLTQKVY 1683
              +   D+  +                     + G    + +     DYP+  +  +K+ 
Sbjct: 435  EEESQSDEEHYQPDAEAEFDYPLKRIHYLNPFSEGGGKDDHLNSEEMDYPQRMKKIEKLL 494

Query: 1682 SSSAI-SEYRPPTDSTMGPVNYPPAAS---GSNIMDRRPFQEDY---KFKGKFQARNPRD 1524
            S+S + S YRPP D+ MG  +YPPA +   G       P + D    +FKG +      +
Sbjct: 495  STSEVTSPYRPPEDAAMGRPSYPPARTIPGGGASSSAEPPRFDAARTRFKGGYND----E 550

Query: 1523 EWNLPSALHQHGAIFIIPQQLGLFDEAFMRWESITKNLVSLQNFTDPQSKTEFIENLLGE 1344
             W LPSA  ++GA+F+IP+QLGLF++AF RWES+TKN V+ Q FTD + K E++ENLLGE
Sbjct: 551  MWTLPSAQQKNGAMFVIPEQLGLFNDAFSRWESVTKNHVATQGFTDTRDKIEYMENLLGE 610

Query: 1343 SEKLVWIQWRMTYPAEYQQLLANADGVSGTQNIISQIRTVFTLEDPYQGSTAVQEEAYRD 1164
             EKL+WIQWRMTY  EY+ L+A  +G  GTQNI+SQ+R VF+LEDP QGST +Q+EAYR+
Sbjct: 611  IEKLIWIQWRMTYATEYEALVAIGEGRDGTQNILSQMRRVFSLEDPAQGSTVIQDEAYRE 670

Query: 1163 LERLTCGNLKNIIQFLNDYMRLASKTGRLFTGPELSENYGLK 1038
            LER++C ++K II FLN+YMRLA+KTGRLF G ELSE   +K
Sbjct: 671  LERMSCTDVKYIIPFLNEYMRLAAKTGRLFLGGELSEKIWMK 712



 Score =  165 bits (418), Expect(2) = e-112
 Identities = 74/107 (69%), Positives = 91/107 (85%)
 Frame = -3

Query: 1053 KLWSKMPGDLGKKIRQAFHEKYVGNSVGVFPRVLFACKYLENECKDAAFKRALKDLSFCS 874
            K+W KMPGDLGK+I++ F  KY G   GV PRVLFA K+LE EC+DAAFKR+LK+LSFCS
Sbjct: 708  KIWMKMPGDLGKRIKEDFDNKYPGVVSGVVPRVLFAYKFLEKECRDAAFKRSLKNLSFCS 767

Query: 873  NIPIPGYYQRPEK*FGIRRSKTFKGKPHPSHARIEKKKHLIRNRKCK 733
            +IPIPGYY+   K +G+RRSKT+KGKPH SHARIEK+KHL+RN++CK
Sbjct: 768  SIPIPGYYKNTGKKYGVRRSKTYKGKPHESHARIEKRKHLVRNKRCK 814


>gb|ANK58542.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  271 bits (694), Expect(2) = e-112
 Identities = 154/342 (45%), Positives = 208/342 (60%), Gaps = 21/342 (6%)
 Frame = -1

Query: 2000 WDTRGEPSGKYDYIVRYSAPSYVT-------TEWPNPIKSSWGDEEEEENKVKIKGLGW- 1845
            WDT GEPSGKYDY VRY+AP   T       T W    K  W D  +E++   I+   + 
Sbjct: 377  WDTLGEPSGKYDYYVRYTAPPATTPIEDIQPTGWEEEPK--WDDSPDEKSLATIRFEEYK 434

Query: 1844 --QPTWDDTPWXXXXXXXXXXXXXXXXTKGIIAAGVEDSEWIT----DYPKLAQLTQKVY 1683
              +   D+  +                     + G    + +     DYP+  +  +K+ 
Sbjct: 435  EEESQSDEEHYHPDAEAEFDYPLKRIHYLNPFSEGGGKDDHLNSEEMDYPQRMKKIEKLL 494

Query: 1682 SSSAI-SEYRPPTDSTMGPVNYPPAAS---GSNIMDRRPFQEDY---KFKGKFQARNPRD 1524
            S+S + S YRPP D+ MG  +YPPA +   G       P + D    +FKG +      +
Sbjct: 495  STSEVTSPYRPPEDAAMGRPSYPPARTIPGGGASSSAEPPRFDAARTRFKGGYND----E 550

Query: 1523 EWNLPSALHQHGAIFIIPQQLGLFDEAFMRWESITKNLVSLQNFTDPQSKTEFIENLLGE 1344
             W LPSA  ++GA+F+IP+QLGLF++AF RWES+TKN V+ Q FTD + K E++ENLLGE
Sbjct: 551  MWTLPSAQQKNGAMFVIPEQLGLFNDAFSRWESVTKNHVATQGFTDTRDKIEYMENLLGE 610

Query: 1343 SEKLVWIQWRMTYPAEYQQLLANADGVSGTQNIISQIRTVFTLEDPYQGSTAVQEEAYRD 1164
             EKL+WIQWRMTY  EY+ L+A  +G  GTQNI+SQ+R VF+LEDP QGST +Q+EAYR+
Sbjct: 611  IEKLIWIQWRMTYATEYEALVAIGEGRDGTQNILSQMRRVFSLEDPAQGSTVIQDEAYRE 670

Query: 1163 LERLTCGNLKNIIQFLNDYMRLASKTGRLFTGPELSENYGLK 1038
            LER++C ++K II FLN+YMRLA+KTGRLF G ELSE   +K
Sbjct: 671  LERMSCTDVKYIIPFLNEYMRLAAKTGRLFLGGELSEKIWMK 712



 Score =  165 bits (418), Expect(2) = e-112
 Identities = 74/107 (69%), Positives = 91/107 (85%)
 Frame = -3

Query: 1053 KLWSKMPGDLGKKIRQAFHEKYVGNSVGVFPRVLFACKYLENECKDAAFKRALKDLSFCS 874
            K+W KMPGDLGK+I++ F  KY G   GV PRVLFA K+LE EC+DAAFKR+LK+LSFCS
Sbjct: 708  KIWMKMPGDLGKRIKEDFDNKYPGVVSGVVPRVLFAYKFLEKECRDAAFKRSLKNLSFCS 767

Query: 873  NIPIPGYYQRPEK*FGIRRSKTFKGKPHPSHARIEKKKHLIRNRKCK 733
            +IPIPGYY+   K +G+RRSKT+KGKPH SHARIEK+KHL+RN++CK
Sbjct: 768  SIPIPGYYKNTGKKYGVRRSKTYKGKPHESHARIEKRKHLVRNKRCK 814


>gb|ANK58539.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  268 bits (685), Expect(2) = e-111
 Identities = 151/340 (44%), Positives = 206/340 (60%), Gaps = 19/340 (5%)
 Frame = -1

Query: 2000 WDTRGEPSGKYDYIVRYSAPSYVT-------TEWPNPIKSSWGDEEEEENKVKIKGLGWQ 1842
            WDT GEPSGKYDY VRY+AP   T       T W    K     +E+    ++ +    +
Sbjct: 377  WDTLGEPSGKYDYYVRYTAPPATTPIEDIQPTGWEEEPKCDDSPDEKSLATIRFEEYKEE 436

Query: 1841 PTW-DDTPWXXXXXXXXXXXXXXXXTKGIIAAGVEDSEWIT----DYPKLAQLTQKVYSS 1677
             +  D+  +                     + G    + +     DYP+  +  +K+ S+
Sbjct: 437  ESQSDEEHYHPDAEAEFDYPLKRIHYLNPFSEGGGKDDHLNSEEMDYPQRMKKIEKLLST 496

Query: 1676 SAI-SEYRPPTDSTMGPVNYPPAAS---GSNIMDRRPFQEDY---KFKGKFQARNPRDEW 1518
            S + S YRPP D+ MG  +YPPA +   G       P + D    +FKG +      + W
Sbjct: 497  SEVTSPYRPPEDAAMGRPSYPPARTIPGGGASSSAEPPRFDAARTRFKGGYND----EMW 552

Query: 1517 NLPSALHQHGAIFIIPQQLGLFDEAFMRWESITKNLVSLQNFTDPQSKTEFIENLLGESE 1338
             LPSA  ++GA+F+IP+QLGLF++AF RWES+TKN V+ Q FTD + K E++ENLLGE E
Sbjct: 553  TLPSAQQKNGAMFVIPEQLGLFNDAFSRWESVTKNHVATQGFTDTRDKIEYMENLLGEIE 612

Query: 1337 KLVWIQWRMTYPAEYQQLLANADGVSGTQNIISQIRTVFTLEDPYQGSTAVQEEAYRDLE 1158
            KL+WIQWRMTY  EY+ L+A  +G  GTQNI+SQ+R VF+LEDP QGST +Q+EAYR+LE
Sbjct: 613  KLIWIQWRMTYATEYEALVAIGEGRDGTQNILSQMRRVFSLEDPAQGSTVIQDEAYRELE 672

Query: 1157 RLTCGNLKNIIQFLNDYMRLASKTGRLFTGPELSENYGLK 1038
            R++C ++K II FLN+YMRLA+KTGRLF G ELSE   +K
Sbjct: 673  RMSCTDVKYIIPFLNEYMRLAAKTGRLFLGGELSEKIWMK 712



 Score =  165 bits (418), Expect(2) = e-111
 Identities = 74/107 (69%), Positives = 91/107 (85%)
 Frame = -3

Query: 1053 KLWSKMPGDLGKKIRQAFHEKYVGNSVGVFPRVLFACKYLENECKDAAFKRALKDLSFCS 874
            K+W KMPGDLGK+I++ F  KY G   GV PRVLFA K+LE EC+DAAFKR+LK+LSFCS
Sbjct: 708  KIWMKMPGDLGKRIKEDFDNKYPGVVSGVVPRVLFAYKFLEKECRDAAFKRSLKNLSFCS 767

Query: 873  NIPIPGYYQRPEK*FGIRRSKTFKGKPHPSHARIEKKKHLIRNRKCK 733
            +IPIPGYY+   K +G+RRSKT+KGKPH SHARIEK+KHL+RN++CK
Sbjct: 768  SIPIPGYYKNTGKKYGVRRSKTYKGKPHESHARIEKRKHLVRNKRCK 814


>ref|YP_009130664.1| polyprotein [Taro bacilliform CH virus]
 gb|AKA45804.1| polyprotein [Taro bacilliform CH virus]
          Length = 1803

 Score =  270 bits (689), Expect(2) = e-111
 Identities = 138/233 (59%), Positives = 170/233 (72%), Gaps = 5/233 (2%)
 Frame = -1

Query: 1721 DYPKLAQLTQKVYSS-SAISEYRPPTDSTMGPVNYPPA---ASGSNIMDRRPFQEDYK-F 1557
            DYP+L  L Q +Y+S SAI+ Y+PP D  MGP NY P             RP  E YK  
Sbjct: 492  DYPQLKNLQQHLYASPSAITGYKPPQDVAMGPPNYGPTPLRVIRPEAGPLRPAFEGYKPG 551

Query: 1556 KGKFQARNPRDEWNLPSALHQHGAIFIIPQQLGLFDEAFMRWESITKNLVSLQNFTDPQS 1377
            + +++A++  + WNLPSA H  GAIFIIP QLG+F++ FMRWESITKNLVS Q FTDP  
Sbjct: 552  EVRYKAKDYSEWWNLPSAQHGTGAIFIIPTQLGMFNDTFMRWESITKNLVSQQGFTDPND 611

Query: 1376 KTEFIENLLGESEKLVWIQWRMTYPAEYQQLLANADGVSGTQNIISQIRTVFTLEDPYQG 1197
            K EFIENLLGE+EK+ WIQWRMTYP  +QQ+L +ADG  GTQNI+SQI  VFTLEDPYQG
Sbjct: 612  KVEFIENLLGEAEKIAWIQWRMTYPEAFQQMLESADGRQGTQNILSQIYRVFTLEDPYQG 671

Query: 1196 STAVQEEAYRDLERLTCGNLKNIIQFLNDYMRLASKTGRLFTGPELSENYGLK 1038
            ST +QEEA RDLE+L+C NLK+I+ ++N+YMRLA K+ RLF   +LSE +  K
Sbjct: 672  STTMQEEALRDLEKLSCHNLKDIVAYMNEYMRLACKSRRLFINADLSEKFWFK 724



 Score =  164 bits (414), Expect(2) = e-111
 Identities = 72/107 (67%), Positives = 95/107 (88%)
 Frame = -3

Query: 1053 KLWSKMPGDLGKKIRQAFHEKYVGNSVGVFPRVLFACKYLENECKDAAFKRALKDLSFCS 874
            K W KMPG+LG +I++A+  +Y GN++GVFPRVLFA K+LENEC+DAA+KR+LK+LSFCS
Sbjct: 720  KFWFKMPGELGPRIKEAYEARYPGNTIGVFPRVLFAYKFLENECRDAAYKRSLKNLSFCS 779

Query: 873  NIPIPGYYQRPEK*FGIRRSKTFKGKPHPSHARIEKKKHLIRNRKCK 733
            +IPIPGYY + EK +G+RRS+T+KGKPH SHARIE++KHL RN++CK
Sbjct: 780  SIPIPGYY-KIEKKYGVRRSRTYKGKPHASHARIERRKHLQRNKRCK 825


>gb|ANK58545.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  268 bits (684), Expect(2) = e-111
 Identities = 153/342 (44%), Positives = 207/342 (60%), Gaps = 21/342 (6%)
 Frame = -1

Query: 2000 WDTRGEPSGKYDYIVRYSAPSYVT-------TEWPNPIKSSWGDEEEEENKVKIKGLGW- 1845
            WDT GEPSGKYDY VRY+AP   T       T W    K  W D  +E++   I+   + 
Sbjct: 377  WDTLGEPSGKYDYYVRYTAPPATTPIEDIQPTCWEEEPK--WDDSPDEKSLATIRFEEYK 434

Query: 1844 --QPTWDDTPWXXXXXXXXXXXXXXXXTKGIIAAGVEDSEWIT----DYPKLAQLTQKVY 1683
              +   D+  +                     + G    + +     DYP+  +  +K+ 
Sbjct: 435  EEESQSDEEHYHPDAEAEFDYPLKRIHYLNPFSEGGGKDDHLNSEEMDYPQRMKKIEKLL 494

Query: 1682 SSSAI-SEYRPPTDSTMGPVNYPPAAS---GSNIMDRRPFQEDY---KFKGKFQARNPRD 1524
            S+S + S YRPP D+ M   +YPPA +   G       P + D    +FKG +      +
Sbjct: 495  STSEVTSPYRPPEDAAMRRPSYPPARTIPGGGASSSAEPPRFDAARTRFKGGYND----E 550

Query: 1523 EWNLPSALHQHGAIFIIPQQLGLFDEAFMRWESITKNLVSLQNFTDPQSKTEFIENLLGE 1344
             W LPSA  ++GA+F+IP+QLGLF++AF RWES+TKN V+ Q FTD + K E++ENLLGE
Sbjct: 551  MWTLPSAQQKNGAMFVIPEQLGLFNDAFSRWESVTKNHVATQGFTDTRDKIEYMENLLGE 610

Query: 1343 SEKLVWIQWRMTYPAEYQQLLANADGVSGTQNIISQIRTVFTLEDPYQGSTAVQEEAYRD 1164
             EKL+WIQWRMTY  EY+ L+A  +G  GTQNI+SQ+R VF+LEDP QGST +Q+EAYR+
Sbjct: 611  IEKLIWIQWRMTYATEYEALVAIGEGRDGTQNILSQMRRVFSLEDPAQGSTVIQDEAYRE 670

Query: 1163 LERLTCGNLKNIIQFLNDYMRLASKTGRLFTGPELSENYGLK 1038
            LER++C ++K II FLN+YMRLA+KTGRLF G ELSE   +K
Sbjct: 671  LERMSCTDVKYIIPFLNEYMRLAAKTGRLFLGGELSEKIWMK 712



 Score =  165 bits (418), Expect(2) = e-111
 Identities = 74/107 (69%), Positives = 91/107 (85%)
 Frame = -3

Query: 1053 KLWSKMPGDLGKKIRQAFHEKYVGNSVGVFPRVLFACKYLENECKDAAFKRALKDLSFCS 874
            K+W KMPGDLGK+I++ F  KY G   GV PRVLFA K+LE EC+DAAFKR+LK+LSFCS
Sbjct: 708  KIWMKMPGDLGKRIKEDFDNKYPGVVSGVVPRVLFAYKFLEKECRDAAFKRSLKNLSFCS 767

Query: 873  NIPIPGYYQRPEK*FGIRRSKTFKGKPHPSHARIEKKKHLIRNRKCK 733
            +IPIPGYY+   K +G+RRSKT+KGKPH SHARIEK+KHL+RN++CK
Sbjct: 768  SIPIPGYYKNTGKKYGVRRSKTYKGKPHESHARIEKRKHLVRNKRCK 814


>gb|ANK58536.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  266 bits (680), Expect(2) = e-110
 Identities = 151/341 (44%), Positives = 207/341 (60%), Gaps = 20/341 (5%)
 Frame = -1

Query: 2000 WDTRGEPSGKYDYIVRYSAPSYVTTEWPNPIKSSWGDEEEEENKVKIKGLGW-------- 1845
            WDT GEPSGKYDY VRY+AP   TT   +   + W +E + ++    K L          
Sbjct: 377  WDTLGEPSGKYDYYVRYTAPP-ATTPIEDIQPTCWEEEPKCDDSPDEKSLATIRFEEYKE 435

Query: 1844 -QPTWDDTPWXXXXXXXXXXXXXXXXTKGIIAAGVEDSEWIT----DYPKLAQLTQKVYS 1680
             +   D+  +                     + G    + +     DYP+  +  +K+ S
Sbjct: 436  EESQSDEEHYHPDAEAEFDYPLKRIHYLNPFSEGGGKDDHLNSEEMDYPQRMKKIEKLLS 495

Query: 1679 SSAI-SEYRPPTDSTMGPVNYPPAAS---GSNIMDRRPFQEDY---KFKGKFQARNPRDE 1521
            +S + S YRPP D+ MG  +YPPA +   G       P + D    +FKG +      + 
Sbjct: 496  TSEVTSPYRPPEDAAMGRPSYPPARTIPGGGASSSAEPPRFDAARTRFKGGYND----EM 551

Query: 1520 WNLPSALHQHGAIFIIPQQLGLFDEAFMRWESITKNLVSLQNFTDPQSKTEFIENLLGES 1341
            W LPSA  ++GA+F+IP+QLGLF++AF RWES+TKN V+ Q FTD + K +++ENLLGE 
Sbjct: 552  WTLPSAQQKNGAMFVIPEQLGLFNDAFSRWESVTKNHVATQGFTDTRDKIKYMENLLGEI 611

Query: 1340 EKLVWIQWRMTYPAEYQQLLANADGVSGTQNIISQIRTVFTLEDPYQGSTAVQEEAYRDL 1161
            EKL+WIQWRMTY  EY+ L+A  +G  GTQNI+SQ+R VF+LEDP QGST +Q+EAYR+L
Sbjct: 612  EKLIWIQWRMTYATEYEALVAIGEGRDGTQNILSQMRRVFSLEDPAQGSTVIQDEAYREL 671

Query: 1160 ERLTCGNLKNIIQFLNDYMRLASKTGRLFTGPELSENYGLK 1038
            ER++C ++K II FLN+YMRLA+KTGRLF G ELSE   +K
Sbjct: 672  ERMSCTDVKYIIPFLNEYMRLAAKTGRLFLGGELSEKIWMK 712



 Score =  165 bits (418), Expect(2) = e-110
 Identities = 74/107 (69%), Positives = 91/107 (85%)
 Frame = -3

Query: 1053 KLWSKMPGDLGKKIRQAFHEKYVGNSVGVFPRVLFACKYLENECKDAAFKRALKDLSFCS 874
            K+W KMPGDLGK+I++ F  KY G   GV PRVLFA K+LE EC+DAAFKR+LK+LSFCS
Sbjct: 708  KIWMKMPGDLGKRIKEDFDNKYPGVVSGVVPRVLFAYKFLEKECRDAAFKRSLKNLSFCS 767

Query: 873  NIPIPGYYQRPEK*FGIRRSKTFKGKPHPSHARIEKKKHLIRNRKCK 733
            +IPIPGYY+   K +G+RRSKT+KGKPH SHARIEK+KHL+RN++CK
Sbjct: 768  SIPIPGYYKNTGKKYGVRRSKTYKGKPHESHARIEKRKHLVRNKRCK 814


>ref|YP_006273075.1| polyprotein [Fig badnavirus 1]
 gb|AEF56561.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  270 bits (690), Expect(2) = e-110
 Identities = 153/342 (44%), Positives = 208/342 (60%), Gaps = 21/342 (6%)
 Frame = -1

Query: 2000 WDTRGEPSGKYDYIVRYSAPSYVT-------TEWPNPIKSSWGDEEEEENKVKIKGLGW- 1845
            WDT GEPSGKYDY VRY+AP   T       T W    K  W D  +E++   I+   + 
Sbjct: 377  WDTLGEPSGKYDYYVRYTAPPATTPIEDIQPTGWEEEPK--WDDSPDEKSLATIRFEEYK 434

Query: 1844 --QPTWDDTPWXXXXXXXXXXXXXXXXTKGIIAAGVEDSEWIT----DYPKLAQLTQKVY 1683
              +   D+  +                     + G    + +     DYP+  +  +K+ 
Sbjct: 435  EEESQSDEEHYQPDAEAEFDYPLKRIHYLNPFSEGGGKDDHLNSEEMDYPQRMKKIEKLL 494

Query: 1682 SSSAI-SEYRPPTDSTMGPVNYPPAAS---GSNIMDRRPFQEDY---KFKGKFQARNPRD 1524
            S+S + S YRPP D+ MG  +YPPA +   G       P + D    +FKG +      +
Sbjct: 495  STSEVTSPYRPPEDAAMGRPSYPPARTIPGGGASSSAEPPRFDAARTRFKGGYND----E 550

Query: 1523 EWNLPSALHQHGAIFIIPQQLGLFDEAFMRWESITKNLVSLQNFTDPQSKTEFIENLLGE 1344
             W LPSA  ++GA+F+IP+QLGLF++AF RWES+TKN V+ Q FTD + K +++ENLLGE
Sbjct: 551  MWTLPSAQQKNGAMFVIPEQLGLFNDAFSRWESVTKNHVATQGFTDTRDKIKYMENLLGE 610

Query: 1343 SEKLVWIQWRMTYPAEYQQLLANADGVSGTQNIISQIRTVFTLEDPYQGSTAVQEEAYRD 1164
             EKL+WIQWRMTY  EY+ L+A  +G  GTQNI+SQ+R VF+LEDP QGST +Q+EAYR+
Sbjct: 611  IEKLIWIQWRMTYATEYEALVAIGEGRDGTQNILSQMRRVFSLEDPAQGSTVIQDEAYRE 670

Query: 1163 LERLTCGNLKNIIQFLNDYMRLASKTGRLFTGPELSENYGLK 1038
            LER++C ++K II FLN+YMRLA+KTGRLF G ELSE   +K
Sbjct: 671  LERMSCTDVKYIIPFLNEYMRLAAKTGRLFLGGELSEKIWMK 712



 Score =  161 bits (407), Expect(2) = e-110
 Identities = 73/107 (68%), Positives = 89/107 (83%)
 Frame = -3

Query: 1053 KLWSKMPGDLGKKIRQAFHEKYVGNSVGVFPRVLFACKYLENECKDAAFKRALKDLSFCS 874
            K+W KMPGDL K I++ F  KY G   GV PRVLFA K+LE EC+DAAFKR+LK+LSFCS
Sbjct: 708  KIWMKMPGDLRKTIKEDFDNKYPGVVSGVVPRVLFAYKFLEKECRDAAFKRSLKNLSFCS 767

Query: 873  NIPIPGYYQRPEK*FGIRRSKTFKGKPHPSHARIEKKKHLIRNRKCK 733
            +IPIPGYY+   K +G+RRSKT+KGKPH SHARIEK+KHL+RN++CK
Sbjct: 768  SIPIPGYYKNTGKKYGVRRSKTYKGKPHESHARIEKRKHLVRNKRCK 814


>gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]
          Length = 1846

 Score =  272 bits (696), Expect(2) = e-110
 Identities = 153/344 (44%), Positives = 209/344 (60%), Gaps = 23/344 (6%)
 Frame = -1

Query: 2000 WDTRGEPSGKYDYIVRYSAP--------SYVTTEWPNPIKSSWGDEEEEENKVKIKGL-G 1848
            WDT G+PSGKYD+ VRYSAP        S  +T W +   +   D+ + + ++ +  L G
Sbjct: 352  WDTLGQPSGKYDFYVRYSAPESSQIPISSIQSTGWEDMDDAVEEDDYDPDARMALLNLMG 411

Query: 1847 WQPTWDDTPWXXXXXXXXXXXXXXXXTKGIIAAGVEDSEWI-----------TDYPKLAQ 1701
              P      +                  G    G E+SE +            DYP + +
Sbjct: 412  RAPVHQIPIYDESDAEMDDFINPFAEGGGERDTGSENSEKLFVFQEEVAEPTLDYPVMKK 471

Query: 1700 LTQKVYSSSAI-SEYRPPTDSTMGPVNYPPAAS--GSNIMDRRPFQEDYKFKGKFQARNP 1530
            L +KVYS+S + S Y PPTD+ MGP +YPPA +  G+          ++  +  F+A   
Sbjct: 472  L-EKVYSTSEVTSRYTPPTDAVMGPPSYPPARNINGAGTSYAAASPPNFNRRVNFKAGYN 530

Query: 1529 RDEWNLPSALHQHGAIFIIPQQLGLFDEAFMRWESITKNLVSLQNFTDPQSKTEFIENLL 1350
             + W+LP A  + GA+F+IP+Q+G+F + F RWESITKN VS Q FTD + K E++ENLL
Sbjct: 531  DELWSLPPAQQKGGAMFVIPEQIGMFHDVFSRWESITKNHVSSQGFTDVRDKLEYMENLL 590

Query: 1349 GESEKLVWIQWRMTYPAEYQQLLANADGVSGTQNIISQIRTVFTLEDPYQGSTAVQEEAY 1170
            GE EKL+WIQWRM Y AEY++L+   +G  GTQNIISQ+R VF+LEDP QGST +QEEAY
Sbjct: 591  GEVEKLLWIQWRMQYNAEYEELVRTGEGREGTQNIISQMRRVFSLEDPAQGSTVIQEEAY 650

Query: 1169 RDLERLTCGNLKNIIQFLNDYMRLASKTGRLFTGPELSENYGLK 1038
            RDLE+L+C N+K I+Q+LN Y+RLA+K+GR + G ELSE   LK
Sbjct: 651  RDLEKLSCDNIKYIVQYLNQYLRLAAKSGRAYVGMELSEKLWLK 694



 Score =  157 bits (396), Expect(2) = e-110
 Identities = 72/107 (67%), Positives = 91/107 (85%)
 Frame = -3

Query: 1053 KLWSKMPGDLGKKIRQAFHEKYVGNSVGVFPRVLFACKYLENECKDAAFKRALKDLSFCS 874
            KLW KMPGDLG +++ AF E+Y G +VGV PR+LFA K+LE ECK+AAFKR+LK+LSFC 
Sbjct: 690  KLWLKMPGDLGNRMKTAFEERYPGLTVGVAPRILFAYKFLEAECKEAAFKRSLKNLSFCK 749

Query: 873  NIPIPGYYQRPEK*FGIRRSKTFKGKPHPSHARIEKKKHLIRNRKCK 733
            +IPIPGYY + +K  GIR+S+ +KGKPH SHARIEK+KHLIRN++CK
Sbjct: 750  DIPIPGYY-KDQKRLGIRKSQRYKGKPHESHARIEKRKHLIRNKRCK 795


>gb|AKA45798.1| polyprotein [Taro bacilliform CH virus]
          Length = 1803

 Score =  267 bits (682), Expect(2) = e-108
 Identities = 137/233 (58%), Positives = 170/233 (72%), Gaps = 5/233 (2%)
 Frame = -1

Query: 1721 DYPKLAQLTQKVYSS-SAISEYRPPTDSTMGPVNYPPA---ASGSNIMDRRPFQEDYK-F 1557
            DYP+L  L Q +Y+S SAI+ Y+PP D  MGP NY P             RP  E YK  
Sbjct: 492  DYPQLKNLQQHLYASPSAITGYKPPQDVAMGPPNYGPTPLRVIRPEAGPSRPAFEGYKPG 551

Query: 1556 KGKFQARNPRDEWNLPSALHQHGAIFIIPQQLGLFDEAFMRWESITKNLVSLQNFTDPQS 1377
            + +++ ++  + WNLPSA +  GAIFIIP QLG+F++ FMRWESITKNLVS Q FTDP  
Sbjct: 552  EVRYKTKDYSEWWNLPSAQYGTGAIFIIPTQLGMFNDTFMRWESITKNLVSQQGFTDPND 611

Query: 1376 KTEFIENLLGESEKLVWIQWRMTYPAEYQQLLANADGVSGTQNIISQIRTVFTLEDPYQG 1197
            K EFIENLLGE+EK+ WIQWRMT+   +QQ+L +ADG  GTQNI+SQIR VFTLEDPYQG
Sbjct: 612  KVEFIENLLGEAEKIAWIQWRMTFLEAFQQMLESADGRQGTQNILSQIRRVFTLEDPYQG 671

Query: 1196 STAVQEEAYRDLERLTCGNLKNIIQFLNDYMRLASKTGRLFTGPELSENYGLK 1038
            STA+QEEA RDLE+L+C NLK+I+ ++N+YMRLASK GRLF   +L E +  K
Sbjct: 672  STAMQEEALRDLEKLSCHNLKDIVAYMNEYMRLASKQGRLFINEDLLEKFWFK 724



 Score =  155 bits (391), Expect(2) = e-108
 Identities = 69/110 (62%), Positives = 93/110 (84%)
 Frame = -3

Query: 1062 IIRKLWSKMPGDLGKKIRQAFHEKYVGNSVGVFPRVLFACKYLENECKDAAFKRALKDLS 883
            ++ K W KMP +LG +I++A+  +Y GN++GVFPRVLFA K+LENEC+DAA+KR+LK LS
Sbjct: 717  LLEKFWFKMPDELGPRIKEAYEARYPGNTIGVFPRVLFAYKFLENECRDAAYKRSLKSLS 776

Query: 882  FCSNIPIPGYYQRPEK*FGIRRSKTFKGKPHPSHARIEKKKHLIRNRKCK 733
            F S+IPI GYY + EK +G+RRS+T+KGKPH SHARIE++KHL RN++CK
Sbjct: 777  FYSSIPILGYY-KTEKKYGVRRSRTYKGKPHASHARIERRKHLQRNKRCK 825


>ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]
 gb|AHI90954.1| polyprotein [Hibiscus bacilliform virus GD1]
          Length = 1892

 Score =  258 bits (658), Expect(2) = e-107
 Identities = 129/244 (52%), Positives = 171/244 (70%), Gaps = 6/244 (2%)
 Frame = -1

Query: 1751 AGVEDSEWITDYPKLAQLT---QKVYSS--SAISEYRPPTDSTMGPVNYPPAASGSNIMD 1587
            A +++   +  YP L +L    +KV+S+  S +S YRPP D+ M P  Y PA   ++   
Sbjct: 493  AMIQEDPDLLPYPHLRELLKNEEKVFSTQQSEVSSYRPPQDTAMTPAGYAPARGEASSST 552

Query: 1586 RRPFQEDYK-FKGKFQARNPRDEWNLPSALHQHGAIFIIPQQLGLFDEAFMRWESITKNL 1410
             +P  E Y   + +F+     + W  P+A  Q GA+F+IP+Q+GLF +AF RWESITKN 
Sbjct: 553  HQPMFEGYMPRRPQFKQDRSTEYWQFPTAQGQTGAMFVIPRQIGLFHDAFNRWESITKNY 612

Query: 1409 VSLQNFTDPQSKTEFIENLLGESEKLVWIQWRMTYPAEYQQLLANADGVSGTQNIISQIR 1230
            V+ Q FTD + K EF+ENLLGE+EKL W+QWRM +P EYQ+++  ADG  GTQNI+SQ+R
Sbjct: 613  VASQGFTDSKDKAEFMENLLGETEKLTWVQWRMNFPTEYQEMVNAADGREGTQNILSQMR 672

Query: 1229 TVFTLEDPYQGSTAVQEEAYRDLERLTCGNLKNIIQFLNDYMRLASKTGRLFTGPELSEN 1050
             VFTLEDP  GSTAVQ+EAYRDLERL+C N+K+I+ FLNDY RLA+K+GR+F  PELSE 
Sbjct: 673  RVFTLEDPTTGSTAVQDEAYRDLERLSCTNIKDIVSFLNDYARLAAKSGRMFISPELSEK 732

Query: 1049 YGLK 1038
              LK
Sbjct: 733  LWLK 736



 Score =  160 bits (406), Expect(2) = e-107
 Identities = 71/107 (66%), Positives = 91/107 (85%)
 Frame = -3

Query: 1053 KLWSKMPGDLGKKIRQAFHEKYVGNSVGVFPRVLFACKYLENECKDAAFKRALKDLSFCS 874
            KLW KMP DLG KIR A+  K+ GN++GVFPR+LF  KYLE ECK+AAF+R+LK+LSFCS
Sbjct: 732  KLWLKMPYDLGNKIRTAYEAKHEGNTIGVFPRILFTYKYLEQECKEAAFRRSLKNLSFCS 791

Query: 873  NIPIPGYYQRPEK*FGIRRSKTFKGKPHPSHARIEKKKHLIRNRKCK 733
             +P+PGYY   +K +G+RRS T+KGKPHP+HARIEK+KHL+RN++CK
Sbjct: 792  EMPLPGYYGE-KKRYGVRRSTTYKGKPHPTHARIEKQKHLVRNKRCK 837


>gb|ASG91840.1| polyprotein [Cacao swollen shoot virus]
          Length = 1879

 Score =  257 bits (657), Expect(2) = e-106
 Identities = 143/327 (43%), Positives = 196/327 (59%), Gaps = 25/327 (7%)
 Frame = -1

Query: 1943 PSYVTTEWPN-PIKSSWGDEEEEEN----------------------KVKIKGLGWQPTW 1833
            P     +W + P++SS  +EEEEE+                      ++ ++G   +P  
Sbjct: 425  PEDAEEDWESIPLQSSPNEEEEEEDYDPDVYWAELQRKEDEWSMCLAQITLEGQTQEPEK 484

Query: 1832 DDTPWXXXXXXXXXXXXXXXXTKGIIAAGVEDSEWITDYPKLAQLTQKVYSSSAISEYRP 1653
            +  P                  + I+A   E++E   +YP+L +   +V  SS + +Y P
Sbjct: 485  EPEP-----------EIEYPQRREIVAMITEETE--LEYPQLRK--PEVVFSSEVVDYTP 529

Query: 1652 PTDSTMGPVNYPPAASGSNIMDRRP--FQEDYKFKGKFQARNPRDEWNLPSALHQHGAIF 1479
            P D+ M PV YPPA++       RP  ++       KF+  +  + W LPS+    GA+F
Sbjct: 530  PGDTLMTPVGYPPASTSRQPPPARPPLYEGRIPQTPKFRRDDYTEWWQLPSSQATTGALF 589

Query: 1478 IIPQQLGLFDEAFMRWESITKNLVSLQNFTDPQSKTEFIENLLGESEKLVWIQWRMTYPA 1299
            ++P+Q+GLF E F RWESITKN ++LQ FTDP  K EFIENLLGE+EKL WIQWRM Y A
Sbjct: 590  VMPKQIGLFHEVFSRWESITKNYIALQEFTDPADKVEFIENLLGETEKLTWIQWRMNYTA 649

Query: 1298 EYQQLLANADGVSGTQNIISQIRTVFTLEDPYQGSTAVQEEAYRDLERLTCGNLKNIIQF 1119
            EYQQLL  ADG  GTQN++SQ++ +F+LEDP  GST VQ+ AYRDLERLTC N+K+I+QF
Sbjct: 650  EYQQLLTQADGRQGTQNVLSQLKRIFSLEDPASGSTRVQDTAYRDLERLTCNNIKDIVQF 709

Query: 1118 LNDYMRLASKTGRLFTGPELSENYGLK 1038
            LNDY RLA+K+GR+F   ELS+   LK
Sbjct: 710  LNDYGRLAAKSGRMFINEELSDKLWLK 736



 Score =  160 bits (404), Expect(2) = e-106
 Identities = 68/107 (63%), Positives = 94/107 (87%)
 Frame = -3

Query: 1053 KLWSKMPGDLGKKIRQAFHEKYVGNSVGVFPRVLFACKYLENECKDAAFKRALKDLSFCS 874
            KLW KMP +LG ++++A++++Y GN+VGVFPR+L+A KYLE ECKDAAFKR+LK LSFC 
Sbjct: 732  KLWLKMPPELGTRMKEAYNKEYPGNAVGVFPRILYAYKYLEQECKDAAFKRSLKSLSFCK 791

Query: 873  NIPIPGYYQRPEK*FGIRRSKTFKGKPHPSHARIEKKKHLIRNRKCK 733
            ++P+ GYY +P+  +G+RRS+T+KGKPH +HARIEKKKHL+RN++CK
Sbjct: 792  DMPLTGYYDKPK--YGVRRSQTYKGKPHATHARIEKKKHLVRNKRCK 836


>gb|ASG91836.1| polyprotein [Cacao swollen shoot virus]
          Length = 1841

 Score =  256 bits (655), Expect(2) = e-105
 Identities = 145/327 (44%), Positives = 192/327 (58%), Gaps = 4/327 (1%)
 Frame = -1

Query: 2006 EIWDTRGEPSGKYDYIVRYSAPSYVTTEWPNPIKSSWGDEEE--EENKVKIKGLGWQPTW 1833
            ++W+     +G++    RY +      E    I S W DEEE  EE+K + K    +   
Sbjct: 373  KVWEESANGNGRF---FRYYSIPQSYYEPQEIIASGWDDEEEGKEESKGEDKDYQNEDDD 429

Query: 1832 DDTPWXXXXXXXXXXXXXXXXTKGIIAAGVEDSEWITDYPKLAQLTQKVYSSSAISEYRP 1653
            DD P                  + I     E+   + +YPK       +   S + +Y P
Sbjct: 430  DDDPDLYWAKLQRQEDEKCKEWEFIATLNEEE---VMEYPKKKPEETVL---SEVVDYTP 483

Query: 1652 PTDSTMGPVNYPPAASGSNIMDRRP--FQEDYKFKGKFQARNPRDEWNLPSALHQHGAIF 1479
            P D+ M PV YPPA++       RP  ++       KF+  +  + W LPS+    GA+F
Sbjct: 484  PGDTLMTPVGYPPASTSRQPQPDRPPLYEGRLPQTPKFRRDDYTEWWQLPSSQATTGALF 543

Query: 1478 IIPQQLGLFDEAFMRWESITKNLVSLQNFTDPQSKTEFIENLLGESEKLVWIQWRMTYPA 1299
            ++P+Q+GLF E F RWESITKN ++LQ FTD   K EFIENLLGE+EKL WIQWRM Y A
Sbjct: 544  VMPKQIGLFHEVFSRWESITKNYIALQEFTDSADKVEFIENLLGETEKLTWIQWRMNYVA 603

Query: 1298 EYQQLLANADGVSGTQNIISQIRTVFTLEDPYQGSTAVQEEAYRDLERLTCGNLKNIIQF 1119
            EYQQL+  ADG  GTQNI+SQ++ +F+LEDP  GST VQ+ AYRDLERLTC N+K+I+QF
Sbjct: 604  EYQQLITQADGRQGTQNILSQLKRIFSLEDPASGSTRVQDAAYRDLERLTCNNIKDIVQF 663

Query: 1118 LNDYMRLASKTGRLFTGPELSENYGLK 1038
            LNDY RLA+K+GR+F   ELSE   LK
Sbjct: 664  LNDYGRLAAKSGRMFINEELSEKLWLK 690



 Score =  157 bits (397), Expect(2) = e-105
 Identities = 66/107 (61%), Positives = 94/107 (87%)
 Frame = -3

Query: 1053 KLWSKMPGDLGKKIRQAFHEKYVGNSVGVFPRVLFACKYLENECKDAAFKRALKDLSFCS 874
            KLW KMP +LG ++++A++++Y GN+VGV+PR+L+A KYLE ECKDAAFKR+LK LSFC 
Sbjct: 686  KLWLKMPPELGLRMKEAYNKEYPGNAVGVYPRILYAYKYLEQECKDAAFKRSLKSLSFCK 745

Query: 873  NIPIPGYYQRPEK*FGIRRSKTFKGKPHPSHARIEKKKHLIRNRKCK 733
            ++P+ GYY +P+  +G+RRS+T++GKPH +HARIEKKKHL+RN++CK
Sbjct: 746  DMPLTGYYDKPK--YGVRRSQTYRGKPHATHARIEKKKHLVRNKRCK 790


>gb|ATZ69463.1| ORF3 polyprotein [Cacao swollen shoot CE virus]
          Length = 1822

 Score =  257 bits (657), Expect(2) = e-105
 Identities = 128/236 (54%), Positives = 162/236 (68%), Gaps = 2/236 (0%)
 Frame = -1

Query: 1739 DSEWITDYPKLAQLTQKVYSSSAISEYRPPTDSTMGPVNYPPAASGSNIMDRRP--FQED 1566
            + E + DYPK A+        S + +Y PP D+ M PV YPPA++       RP  ++  
Sbjct: 460  NEEEVMDYPKKAETVL-----SEVVDYTPPGDTLMTPVGYPPASTSRQPQPERPPLYEGR 514

Query: 1565 YKFKGKFQARNPRDEWNLPSALHQHGAIFIIPQQLGLFDEAFMRWESITKNLVSLQNFTD 1386
                 KF+  +  + W LPS+    GA+F++P+Q+GLF E F RWESITKN ++LQ FTD
Sbjct: 515  LPQTPKFRRDDYTEWWQLPSSQATTGALFVMPKQIGLFHEVFSRWESITKNYIALQEFTD 574

Query: 1385 PQSKTEFIENLLGESEKLVWIQWRMTYPAEYQQLLANADGVSGTQNIISQIRTVFTLEDP 1206
            P  K EFIENLLGE+EKL WIQWRM Y  EYQQL+  ADG  GTQNI+SQ++ +F+LEDP
Sbjct: 575  PADKVEFIENLLGETEKLTWIQWRMNYVTEYQQLITQADGRQGTQNILSQLKRIFSLEDP 634

Query: 1205 YQGSTAVQEEAYRDLERLTCGNLKNIIQFLNDYMRLASKTGRLFTGPELSENYGLK 1038
              GST VQ+ AYRDLERLTC N+K+I+QFLNDY RLA+KTGR+F   ELSE   LK
Sbjct: 635  ASGSTRVQDAAYRDLERLTCNNIKDIVQFLNDYGRLAAKTGRMFINEELSEKLWLK 690



 Score =  156 bits (394), Expect(2) = e-105
 Identities = 65/107 (60%), Positives = 94/107 (87%)
 Frame = -3

Query: 1053 KLWSKMPGDLGKKIRQAFHEKYVGNSVGVFPRVLFACKYLENECKDAAFKRALKDLSFCS 874
            KLW KMP +LG ++++A++++Y GN+VGV+PR+L+A KYLE ECKDAAFKR+LK LSFC 
Sbjct: 686  KLWLKMPPELGLRMKEAYNKEYPGNAVGVYPRILYAYKYLEQECKDAAFKRSLKSLSFCK 745

Query: 873  NIPIPGYYQRPEK*FGIRRSKTFKGKPHPSHARIEKKKHLIRNRKCK 733
            ++P+ GYY +P+  +G+R+S+T++GKPH +HARIEKKKHL+RN++CK
Sbjct: 746  DMPLTGYYDKPK--YGVRKSQTYRGKPHATHARIEKKKHLVRNKRCK 790


>gb|ASA40116.1| ORF3 [Dioscorea bacilliform RT virus 2]
          Length = 1892

 Score =  263 bits (671), Expect(2) = e-105
 Identities = 131/232 (56%), Positives = 165/232 (71%), Gaps = 4/232 (1%)
 Frame = -1

Query: 1721 DYPKLAQLTQKVYSSSAISEYRPPTDSTMGPVNYPPA----ASGSNIMDRRPFQEDYKFK 1554
            DYP+L +L + V +S+A+SEY PP D++M P  YPPA    A+ +               
Sbjct: 544  DYPELEELQRIVGASTAMSEYSPPQDTSMNPPTYPPARRESAASAPSTATTSSVPTVSAG 603

Query: 1553 GKFQARNPRDEWNLPSALHQHGAIFIIPQQLGLFDEAFMRWESITKNLVSLQNFTDPQSK 1374
             +F+ ++    W LPSA    GAIF +P +LG FDE FMRWES+TKNL +   FT  + K
Sbjct: 604  TRFRGKDYSGAWTLPSAQQTTGAIFNMPLELGKFDEVFMRWESVTKNLTAQHVFTSGRDK 663

Query: 1373 TEFIENLLGESEKLVWIQWRMTYPAEYQQLLANADGVSGTQNIISQIRTVFTLEDPYQGS 1194
             EFIENLLGE EKL W+QWR  YPAEY  LLA+ADG  GTQNI+SQIRT+FTLEDP++GS
Sbjct: 664  AEFIENLLGEYEKLTWLQWRTAYPAEYDTLLASADGREGTQNILSQIRTIFTLEDPFRGS 723

Query: 1193 TAVQEEAYRDLERLTCGNLKNIIQFLNDYMRLASKTGRLFTGPELSENYGLK 1038
            T VQE+AYRDLER++C ++KNII F+N+YMRLASK+GRLF  PELSE + LK
Sbjct: 724  TKVQEDAYRDLERISCSDMKNIIAFMNEYMRLASKSGRLFVSPELSEKFWLK 775



 Score =  150 bits (378), Expect(2) = e-105
 Identities = 68/112 (60%), Positives = 85/112 (75%), Gaps = 5/112 (4%)
 Frame = -3

Query: 1053 KLWSKMPGDLGKKIRQAFHEKYVGNSVGVFPRVLFACKYLENECKDAAFKRALKDLSFCS 874
            K W K+PGDLGK+I++ F + Y GN+VGV PR+LF  K+LE ECK AAF R+LK L FCS
Sbjct: 771  KFWLKLPGDLGKRIKEKFDQAYAGNNVGVHPRILFTYKFLEEECKAAAFSRSLKGLQFCS 830

Query: 873  NIPIPGYYQRPEK*FGIRRSKTFKGKPHPSHARIEKKKHL-----IRNRKCK 733
             IPIPGYYQ   K +G+RRS T+KGKPH +H RIEKKK+L     ++N+KCK
Sbjct: 831  QIPIPGYYQNSGKKYGVRRSTTYKGKPHETHVRIEKKKYLERGSALKNKKCK 882


>gb|ATZ69477.1| ORF3 polyprotein [Cacao swollen shoot Ghana L virus]
          Length = 1853

 Score =  253 bits (647), Expect(2) = e-105
 Identities = 152/348 (43%), Positives = 195/348 (56%), Gaps = 25/348 (7%)
 Frame = -1

Query: 2006 EIWDTRGEPSGKYDYIVRYSAPS--YVTTEWPNPIKSSWGDE--------EEEENKVKIK 1857
            ++W+     +G++     YS P+  Y TTE    I S WGDE        +EE+      
Sbjct: 373  KVWEESANGNGRF--FRYYSMPNSYYDTTEI---IASGWGDEPETPEPPRKEEDPSNDDN 427

Query: 1856 GLGWQPT---------WDDTPWXXXXXXXXXXXXXXXXT--KGIIAAGVEDSEWITDYPK 1710
              GW+P          W++  W                   + I   G  + E      K
Sbjct: 428  DEGWEPLPIINDEHRDWENE-WEQWEPSEERETEDEEDEFQRSIELIGTLELEMEYPQRK 486

Query: 1709 LAQLTQKVYSSSAISE---YRPPTDSTMGPVNYPPAASGSNIMDRRPFQED-YKFKGKFQ 1542
             +Q  Q     + +SE   Y PP D+ M PV YPPA++      R P  E  +    KF+
Sbjct: 487  ESQSNQHQRKETILSEIVDYTPPADTLMTPVGYPPASTSRQPPARPPLYEGRFPQTPKFR 546

Query: 1541 ARNPRDEWNLPSALHQHGAIFIIPQQLGLFDEAFMRWESITKNLVSLQNFTDPQSKTEFI 1362
              +  + W LPS+    GA+F++P+Q+GLF E F RWESITKN V+ Q FTD   K EFI
Sbjct: 547  RDDYTEWWQLPSSQATTGALFVMPKQIGLFHEVFSRWESITKNYVAAQEFTDSSDKVEFI 606

Query: 1361 ENLLGESEKLVWIQWRMTYPAEYQQLLANADGVSGTQNIISQIRTVFTLEDPYQGSTAVQ 1182
            ENLLGE+EKL WIQWRM Y  EYQQLL  ADG  GT NI+SQ++ VF+LEDP  GST VQ
Sbjct: 607  ENLLGETEKLTWIQWRMNYVTEYQQLLTQADGRQGTHNILSQVKRVFSLEDPTAGSTRVQ 666

Query: 1181 EEAYRDLERLTCGNLKNIIQFLNDYMRLASKTGRLFTGPELSENYGLK 1038
            + AYRDLERLTC N+K+I+QFLNDY RLA+K+GRLF G ELS+   LK
Sbjct: 667  DAAYRDLERLTCNNIKDIVQFLNDYGRLAAKSGRLFLGEELSDKLWLK 714



 Score =  159 bits (402), Expect(2) = e-105
 Identities = 68/107 (63%), Positives = 92/107 (85%)
 Frame = -3

Query: 1053 KLWSKMPGDLGKKIRQAFHEKYVGNSVGVFPRVLFACKYLENECKDAAFKRALKDLSFCS 874
            KLW KMP +LG ++++ F ++Y GN++GVFPR+L+A KYLE ECKDAAFKR+LK LSFC 
Sbjct: 710  KLWLKMPPELGTRMKEGFQKEYPGNTIGVFPRILYAYKYLEQECKDAAFKRSLKSLSFCK 769

Query: 873  NIPIPGYYQRPEK*FGIRRSKTFKGKPHPSHARIEKKKHLIRNRKCK 733
            ++P+ GYY +P+  +G+RRS+T+KGKPH +HARIEKKKHLIRN++CK
Sbjct: 770  DMPLTGYYDKPK--YGVRRSQTYKGKPHATHARIEKKKHLIRNKRCK 814


>gb|ANV20896.1| ORF3 protein [Dioscorea bacilliform RT virus]
          Length = 1893

 Score =  263 bits (671), Expect(2) = e-104
 Identities = 132/237 (55%), Positives = 167/237 (70%), Gaps = 9/237 (3%)
 Frame = -1

Query: 1721 DYPKLAQLTQKVYSSSAISEYRPPTDSTMGPVNYPPA---------ASGSNIMDRRPFQE 1569
            DYP+L +L + V +S+A+SEY PP D++M P  YPPA         ++ + I    P   
Sbjct: 543  DYPELEELQRIVGASTAMSEYSPPQDTSMNPPTYPPARRESAASAPSTSTGISSGAP--- 599

Query: 1568 DYKFKGKFQARNPRDEWNLPSALHQHGAIFIIPQQLGLFDEAFMRWESITKNLVSLQNFT 1389
                  +F+ ++    W LPSA    GAIF +P +LG FDE FMRWES+TKNL +   FT
Sbjct: 600  TVSAGTRFRGKDYSGAWTLPSAQQTTGAIFNMPLELGKFDEVFMRWESVTKNLTAQHVFT 659

Query: 1388 DPQSKTEFIENLLGESEKLVWIQWRMTYPAEYQQLLANADGVSGTQNIISQIRTVFTLED 1209
              + K EFIENLLGE EKL W+QWR  YPAEY  LLA+ADG  GTQNI+SQIRT+FTLED
Sbjct: 660  SGRDKAEFIENLLGEYEKLTWLQWRTAYPAEYDTLLASADGREGTQNILSQIRTIFTLED 719

Query: 1208 PYQGSTAVQEEAYRDLERLTCGNLKNIIQFLNDYMRLASKTGRLFTGPELSENYGLK 1038
            P++GST VQE+AYRDLER++C ++KNII F+N+YMRLASK+GRLF  PELSE + LK
Sbjct: 720  PFRGSTKVQEDAYRDLERISCSDMKNIIAFMNEYMRLASKSGRLFVSPELSEKFWLK 776



 Score =  148 bits (374), Expect(2) = e-104
 Identities = 67/112 (59%), Positives = 85/112 (75%), Gaps = 5/112 (4%)
 Frame = -3

Query: 1053 KLWSKMPGDLGKKIRQAFHEKYVGNSVGVFPRVLFACKYLENECKDAAFKRALKDLSFCS 874
            K W K+PGDLGK+I++ F + Y GN+VGV PR+LF  K+LE ECK AAF R+LK L FCS
Sbjct: 772  KFWLKLPGDLGKRIKEKFDQAYAGNNVGVHPRILFTYKFLEEECKAAAFSRSLKGLQFCS 831

Query: 873  NIPIPGYYQRPEK*FGIRRSKTFKGKPHPSHARIEKKKHL-----IRNRKCK 733
             IPIPGYY+   K +G+RRS T+KGKPH +H RIEKKK+L     ++N+KCK
Sbjct: 832  QIPIPGYYKNSGKKYGVRRSTTYKGKPHETHVRIEKKKYLERGSALKNKKCK 883


>gb|ATZ69472.1| ORF3 polyprotein [Cacao swollen shoot Ghana K virus]
          Length = 1881

 Score =  258 bits (660), Expect(2) = e-104
 Identities = 132/243 (54%), Positives = 170/243 (69%), Gaps = 2/243 (0%)
 Frame = -1

Query: 1760 IIAAGVEDSEWITDYPKLAQLTQKVYSSSAISEYRPPTDSTMGPVNYPPAASGSNIMDRR 1581
            IIA   E+     +YP+L    ++V+SS  + +Y PP D+ M PV YPPA++       R
Sbjct: 483  IIATLTEEKPDELEYPQLRN-PERVFSSEVV-DYTPPGDTLMTPVGYPPASTSRQPQPVR 540

Query: 1580 P--FQEDYKFKGKFQARNPRDEWNLPSALHQHGAIFIIPQQLGLFDEAFMRWESITKNLV 1407
            P  ++       KF+  +  + W LPS+    GA+F++P+Q+GLF E F RWESITKN +
Sbjct: 541  PPLYEGRIPQTPKFRRDDYTEWWQLPSSQATTGALFVMPKQIGLFHEVFSRWESITKNYI 600

Query: 1406 SLQNFTDPQSKTEFIENLLGESEKLVWIQWRMTYPAEYQQLLANADGVSGTQNIISQIRT 1227
            +LQ FTDP  K EFIENLLGE+EKL WIQWRM Y AEYQQL+A ADG  GTQNI+SQ++ 
Sbjct: 601  ALQEFTDPADKVEFIENLLGETEKLTWIQWRMNYVAEYQQLIAQADGRQGTQNILSQLKR 660

Query: 1226 VFTLEDPYQGSTAVQEEAYRDLERLTCGNLKNIIQFLNDYMRLASKTGRLFTGPELSENY 1047
            VF+LEDP  GST VQ+ AYRDLERLTC N+K+I+QFLNDY RLA+K+GR+F   ELS+  
Sbjct: 661  VFSLEDPASGSTRVQDAAYRDLERLTCNNIKDIVQFLNDYGRLAAKSGRMFINEELSDKL 720

Query: 1046 GLK 1038
             LK
Sbjct: 721  WLK 723



 Score =  152 bits (384), Expect(2) = e-104
 Identities = 64/107 (59%), Positives = 91/107 (85%)
 Frame = -3

Query: 1053 KLWSKMPGDLGKKIRQAFHEKYVGNSVGVFPRVLFACKYLENECKDAAFKRALKDLSFCS 874
            KLW KMP +LG ++++A+ ++Y GN +GV+PR+L+A KYLE ECK+AAF R+LK LSFC 
Sbjct: 719  KLWLKMPPELGTRMKEAYSKEYPGNGIGVYPRILYAYKYLEQECKNAAFTRSLKSLSFCK 778

Query: 873  NIPIPGYYQRPEK*FGIRRSKTFKGKPHPSHARIEKKKHLIRNRKCK 733
            ++P+ GYY +P+  +G+RRS+T+KGKPH +HARIEKKKHL+RN++CK
Sbjct: 779  DMPLTGYYDKPK--YGMRRSQTYKGKPHATHARIEKKKHLVRNKRCK 823


>gb|ASG91844.1| polyprotein [Cacao swollen shoot virus]
          Length = 1871

 Score =  249 bits (636), Expect(2) = e-104
 Identities = 129/248 (52%), Positives = 169/248 (68%), Gaps = 5/248 (2%)
 Frame = -1

Query: 1766 KGIIAAGVEDSEWITDYPKLAQLTQK---VYSSSAISEYRPPTDSTMGPVNYPPAASGSN 1596
            K +IA   E+ +  T+ P+L    +K   V  SS + +Y PP D+ M PV YPPA++   
Sbjct: 491  KEMIATFKEEEQ--TEEPELEYPQRKKSEVILSSEVVDYTPPGDTLMTPVGYPPASTSRQ 548

Query: 1595 IMDRRP--FQEDYKFKGKFQARNPRDEWNLPSALHQHGAIFIIPQQLGLFDEAFMRWESI 1422
                RP  ++       KF+  +  + W LP++    GA+F++P+Q+GLF E F RWES+
Sbjct: 549  PQPPRPPLYEGRTPHVPKFKRDDYTEWWQLPASQATTGALFVMPKQIGLFHEVFSRWESV 608

Query: 1421 TKNLVSLQNFTDPQSKTEFIENLLGESEKLVWIQWRMTYPAEYQQLLANADGVSGTQNII 1242
            TKN ++LQ FTD   K EFIENLLGE+EKL WIQWRM Y AEYQQLL  ADG  GTQNI+
Sbjct: 609  TKNYLALQEFTDSTDKVEFIENLLGETEKLTWIQWRMNYVAEYQQLLTQADGRQGTQNIL 668

Query: 1241 SQIRTVFTLEDPYQGSTAVQEEAYRDLERLTCGNLKNIIQFLNDYMRLASKTGRLFTGPE 1062
            SQ++ +F+LEDP  GST VQ+ AYRDLERLTC N+K+I+QFLNDY RLA+K+GR+F   E
Sbjct: 669  SQLKRIFSLEDPASGSTRVQDAAYRDLERLTCNNIKDIVQFLNDYGRLAAKSGRMFINEE 728

Query: 1061 LSENYGLK 1038
            LS+   LK
Sbjct: 729  LSDKLWLK 736



 Score =  160 bits (406), Expect(2) = e-104
 Identities = 70/107 (65%), Positives = 93/107 (86%)
 Frame = -3

Query: 1053 KLWSKMPGDLGKKIRQAFHEKYVGNSVGVFPRVLFACKYLENECKDAAFKRALKDLSFCS 874
            KLW KMP +LG ++++A++ +Y GN+VGV+PR+L+A KYLE ECKDAAFKR+LK LSFC 
Sbjct: 732  KLWLKMPPELGTRMKEAYNREYPGNAVGVYPRILYAYKYLEQECKDAAFKRSLKSLSFCK 791

Query: 873  NIPIPGYYQRPEK*FGIRRSKTFKGKPHPSHARIEKKKHLIRNRKCK 733
            +IPI GYY +P+  +G+RRS+T+KGKPH +HARIEKKKHLIRN++CK
Sbjct: 792  DIPITGYYDKPK--YGVRRSQTYKGKPHATHARIEKKKHLIRNKRCK 836


>gb|AHG94942.1| ORF3, partial [Dioscorea bacilliform virus]
          Length = 1395

 Score =  253 bits (647), Expect(2) = e-104
 Identities = 134/248 (54%), Positives = 167/248 (67%), Gaps = 14/248 (5%)
 Frame = -1

Query: 1739 DSEWITDYPKLAQLTQKVYSSSAISEYRPPTDSTMGPVNYPPAASGSNIMDRRPFQEDYK 1560
            DS    DYP L +L   + +SSAISEYRPP D+TM P  YPPA   S        Q    
Sbjct: 56   DSSLDLDYPTLQRLEATI-ASSAISEYRPPEDTTMNPPTYPPARI-SGQASTSTGQPSTS 113

Query: 1559 FKGK--------------FQARNPRDEWNLPSALHQHGAIFIIPQQLGLFDEAFMRWESI 1422
            + G+              F+AR+  + W+LPSA    GA+F +P +L  FDE F RWESI
Sbjct: 114  YSGQPTSSYSQRVPTGVHFRARDYSNNWSLPSAQQNTGAMFYLPLELVKFDEVFSRWESI 173

Query: 1421 TKNLVSLQNFTDPQSKTEFIENLLGESEKLVWIQWRMTYPAEYQQLLANADGVSGTQNII 1242
            TKNLVS Q+F   + K EFIENLLGE+EKL WIQWR  +P EY+ LLA+ADG  GTQNI+
Sbjct: 174  TKNLVSQQSFITGKEKAEFIENLLGETEKLTWIQWRTAFPTEYETLLASADGREGTQNIL 233

Query: 1241 SQIRTVFTLEDPYQGSTAVQEEAYRDLERLTCGNLKNIIQFLNDYMRLASKTGRLFTGPE 1062
            S IRT+FTLEDPY+GST VQE+AY DLER++C ++K++I FLN+YMRLA+KTGRLF   E
Sbjct: 234  SHIRTIFTLEDPYRGSTKVQEQAYLDLERISCRDVKDLIPFLNEYMRLAAKTGRLFISAE 293

Query: 1061 LSENYGLK 1038
            LS+   +K
Sbjct: 294  LSDKIWMK 301



 Score =  156 bits (395), Expect(2) = e-104
 Identities = 66/107 (61%), Positives = 87/107 (81%)
 Frame = -3

Query: 1053 KLWSKMPGDLGKKIRQAFHEKYVGNSVGVFPRVLFACKYLENECKDAAFKRALKDLSFCS 874
            K+W K+PGDLGK+I+  F E+Y GN++GV PR++F  K+LE ECK+AAF R++K+L FCS
Sbjct: 297  KIWMKLPGDLGKRIKTKFDEQYAGNTIGVHPRIMFIYKFLEEECKNAAFMRSMKNLQFCS 356

Query: 873  NIPIPGYYQRPEK*FGIRRSKTFKGKPHPSHARIEKKKHLIRNRKCK 733
             IPIPGYY   EK +G+R+SKT+KGKPH SH RIEK+KHL R ++CK
Sbjct: 357  KIPIPGYYGGAEKKYGVRKSKTYKGKPHQSHVRIEKRKHLTREKRCK 403