BLASTX nr result
ID: Cheilocostus21_contig00027556
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00027556
(428 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_018673738.1| PREDICTED: pre-mRNA-splicing factor 38B-like... 88 1e-17
ref|XP_009419333.1| PREDICTED: pre-mRNA-splicing factor 38B-like... 88 1e-17
ref|XP_010931628.1| PREDICTED: pre-mRNA splicing factor SR-like ... 82 5e-16
ref|XP_010931627.1| PREDICTED: pre-mRNA splicing factor SR-like ... 82 1e-15
ref|XP_008800851.1| PREDICTED: pre-mRNA-splicing factor 38B [Pho... 80 9e-15
ref|XP_009403545.1| PREDICTED: pre-mRNA-splicing factor 38B isof... 75 5e-13
ref|XP_009403544.1| PREDICTED: pre-mRNA-splicing factor 38B isof... 75 6e-13
ref|XP_020265661.1| pre-mRNA splicing factor SR-like 1 isoform X... 64 3e-09
ref|XP_020265660.1| pre-mRNA splicing factor SR-like 1 isoform X... 64 4e-09
ref|XP_020087776.1| pre-mRNA splicing factor SR-like 1 isoform X... 60 1e-07
ref|XP_020087774.1| pre-mRNA splicing factor SR-like 1 isoform X... 60 1e-07
ref|XP_021303422.1| pre-mRNA splicing factor SR-like 1 isoform X... 57 1e-06
ref|XP_002439377.1| pre-mRNA splicing factor SR-like 1 isoform X... 57 1e-06
gb|ACN25856.1| unknown [Zea mays] 55 3e-06
gb|AQK84489.1| PRP38 family protein [Zea mays] 55 3e-06
gb|AQK84482.1| PRP38 family protein [Zea mays] >gi|1142826396|gb... 55 3e-06
gb|ACR38001.1| unknown [Zea mays] 55 3e-06
gb|AQK84485.1| PRP38 family protein [Zea mays] 55 4e-06
ref|NP_001169167.1| uncharacterized protein LOC100383017 [Zea ma... 55 4e-06
ref|XP_008648097.1| uncharacterized protein LOC100383017 isoform... 55 4e-06
>ref|XP_018673738.1| PREDICTED: pre-mRNA-splicing factor 38B-like isoform X2 [Musa
acuminata subsp. malaccensis]
Length = 383
Score = 87.8 bits (216), Expect = 1e-17
Identities = 41/58 (70%), Positives = 50/58 (86%), Gaps = 1/58 (1%)
Frame = +1
Query: 256 HIHGADSDHRPSPNRDENKDKTKLVSGNLAKLKDLYGDATD-KGEEASDRLQRDTSTE 426
HIHGADSD+RPSP RDEN++KTK S NLAKLKDLYGD +D K +E +DRL++DT+TE
Sbjct: 315 HIHGADSDNRPSPFRDENREKTKTASSNLAKLKDLYGDGSDKKSDETADRLRKDTNTE 372
>ref|XP_009419333.1| PREDICTED: pre-mRNA-splicing factor 38B-like isoform X1 [Musa
acuminata subsp. malaccensis]
ref|XP_009419334.1| PREDICTED: pre-mRNA-splicing factor 38B-like isoform X1 [Musa
acuminata subsp. malaccensis]
ref|XP_009419335.1| PREDICTED: pre-mRNA-splicing factor 38B-like isoform X1 [Musa
acuminata subsp. malaccensis]
ref|XP_018673734.1| PREDICTED: pre-mRNA-splicing factor 38B-like isoform X1 [Musa
acuminata subsp. malaccensis]
ref|XP_018673735.1| PREDICTED: pre-mRNA-splicing factor 38B-like isoform X1 [Musa
acuminata subsp. malaccensis]
ref|XP_018673736.1| PREDICTED: pre-mRNA-splicing factor 38B-like isoform X1 [Musa
acuminata subsp. malaccensis]
ref|XP_018673737.1| PREDICTED: pre-mRNA-splicing factor 38B-like isoform X1 [Musa
acuminata subsp. malaccensis]
Length = 407
Score = 87.8 bits (216), Expect = 1e-17
Identities = 41/58 (70%), Positives = 50/58 (86%), Gaps = 1/58 (1%)
Frame = +1
Query: 256 HIHGADSDHRPSPNRDENKDKTKLVSGNLAKLKDLYGDATD-KGEEASDRLQRDTSTE 426
HIHGADSD+RPSP RDEN++KTK S NLAKLKDLYGD +D K +E +DRL++DT+TE
Sbjct: 339 HIHGADSDNRPSPFRDENREKTKTASSNLAKLKDLYGDGSDKKSDETADRLRKDTNTE 396
>ref|XP_010931628.1| PREDICTED: pre-mRNA splicing factor SR-like 1 isoform X2 [Elaeis
guineensis]
ref|XP_019708876.1| PREDICTED: pre-mRNA splicing factor SR-like 1 isoform X2 [Elaeis
guineensis]
ref|XP_019708877.1| PREDICTED: pre-mRNA splicing factor SR-like 1 isoform X2 [Elaeis
guineensis]
ref|XP_019708878.1| PREDICTED: pre-mRNA splicing factor SR-like 1 isoform X2 [Elaeis
guineensis]
Length = 296
Score = 82.4 bits (202), Expect = 5e-16
Identities = 38/56 (67%), Positives = 46/56 (82%)
Frame = +1
Query: 259 IHGADSDHRPSPNRDENKDKTKLVSGNLAKLKDLYGDATDKGEEASDRLQRDTSTE 426
IHGA+SDHRPSP RD +K+KT VS NLAKLKDLYGD +DK E ++R++RDT TE
Sbjct: 230 IHGANSDHRPSPLRDGSKEKTASVSSNLAKLKDLYGDGSDKQSEGTERIRRDTGTE 285
>ref|XP_010931627.1| PREDICTED: pre-mRNA splicing factor SR-like 1 isoform X1 [Elaeis
guineensis]
ref|XP_019708875.1| PREDICTED: pre-mRNA splicing factor SR-like 1 isoform X1 [Elaeis
guineensis]
Length = 428
Score = 82.4 bits (202), Expect = 1e-15
Identities = 38/56 (67%), Positives = 46/56 (82%)
Frame = +1
Query: 259 IHGADSDHRPSPNRDENKDKTKLVSGNLAKLKDLYGDATDKGEEASDRLQRDTSTE 426
IHGA+SDHRPSP RD +K+KT VS NLAKLKDLYGD +DK E ++R++RDT TE
Sbjct: 362 IHGANSDHRPSPLRDGSKEKTASVSSNLAKLKDLYGDGSDKQSEGTERIRRDTGTE 417
>ref|XP_008800851.1| PREDICTED: pre-mRNA-splicing factor 38B [Phoenix dactylifera]
Length = 418
Score = 80.1 bits (196), Expect = 9e-15
Identities = 38/56 (67%), Positives = 45/56 (80%)
Frame = +1
Query: 259 IHGADSDHRPSPNRDENKDKTKLVSGNLAKLKDLYGDATDKGEEASDRLQRDTSTE 426
I GA+SDHRPSP RD +K+KT VS NLAKLKDLYGD +DK E ++RL+RDT TE
Sbjct: 352 IRGANSDHRPSPLRDGSKEKTASVSSNLAKLKDLYGDGSDKQSEGTERLRRDTGTE 407
>ref|XP_009403545.1| PREDICTED: pre-mRNA-splicing factor 38B isoform X2 [Musa acuminata
subsp. malaccensis]
Length = 420
Score = 75.1 bits (183), Expect = 5e-13
Identities = 40/58 (68%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Frame = +1
Query: 256 HIHGADSDHRPSPNRDENKDKTKLVSGNLAKLKDLYGDATD-KGEEASDRLQRDTSTE 426
H GAD RPSP DENK+KTK VS NLAKLKDLYGD +D K EA+DRL++DTSTE
Sbjct: 355 HTRGAD---RPSPFGDENKEKTKAVSSNLAKLKDLYGDGSDKKSNEAADRLRKDTSTE 409
>ref|XP_009403544.1| PREDICTED: pre-mRNA-splicing factor 38B isoform X1 [Musa acuminata
subsp. malaccensis]
Length = 459
Score = 75.1 bits (183), Expect = 6e-13
Identities = 40/58 (68%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Frame = +1
Query: 256 HIHGADSDHRPSPNRDENKDKTKLVSGNLAKLKDLYGDATD-KGEEASDRLQRDTSTE 426
H GAD RPSP DENK+KTK VS NLAKLKDLYGD +D K EA+DRL++DTSTE
Sbjct: 394 HTRGAD---RPSPFGDENKEKTKAVSSNLAKLKDLYGDGSDKKSNEAADRLRKDTSTE 448
>ref|XP_020265661.1| pre-mRNA splicing factor SR-like 1 isoform X2 [Asparagus
officinalis]
ref|XP_020265662.1| pre-mRNA splicing factor SR-like 1 isoform X2 [Asparagus
officinalis]
ref|XP_020265663.1| pre-mRNA splicing factor SR-like 1 isoform X2 [Asparagus
officinalis]
Length = 281
Score = 63.9 bits (154), Expect = 3e-09
Identities = 35/54 (64%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Frame = +1
Query: 268 ADSDHRPSPNRDENKDKTKLVSGNLAKLKDLYGDATDKGEEA-SDRLQRDTSTE 426
A SD RPSP D N+DK VS NLAKLKDLYGD +DK ++A +DRL +DTSTE
Sbjct: 220 ASSDRRPSPFGDGNRDK---VSSNLAKLKDLYGDVSDKKKDAGNDRLMKDTSTE 270
>ref|XP_020265660.1| pre-mRNA splicing factor SR-like 1 isoform X1 [Asparagus
officinalis]
gb|ONK70384.1| uncharacterized protein A4U43_C05F33160 [Asparagus officinalis]
Length = 383
Score = 63.9 bits (154), Expect = 4e-09
Identities = 35/54 (64%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Frame = +1
Query: 268 ADSDHRPSPNRDENKDKTKLVSGNLAKLKDLYGDATDKGEEA-SDRLQRDTSTE 426
A SD RPSP D N+DK VS NLAKLKDLYGD +DK ++A +DRL +DTSTE
Sbjct: 322 ASSDRRPSPFGDGNRDK---VSSNLAKLKDLYGDVSDKKKDAGNDRLMKDTSTE 372
>ref|XP_020087776.1| pre-mRNA splicing factor SR-like 1 isoform X2 [Ananas comosus]
gb|OAY82926.1| Pre-mRNA-splicing factor 38B [Ananas comosus]
Length = 398
Score = 59.7 bits (143), Expect = 1e-07
Identities = 33/60 (55%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Frame = +1
Query: 256 HIHGADSDHRPSPNRDENKDKTKL-VSGNLAKLKDLYGDATDK--GEEASDRLQRDTSTE 426
H+ G+ S+HR SP RD +K+K V NLAKLKDLYGDATDK E RL D TE
Sbjct: 328 HVQGSASEHRSSPFRDASKEKAAASVPSNLAKLKDLYGDATDKKSAENDGSRLHSDYGTE 387
>ref|XP_020087774.1| pre-mRNA splicing factor SR-like 1 isoform X1 [Ananas comosus]
Length = 408
Score = 59.7 bits (143), Expect = 1e-07
Identities = 33/60 (55%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Frame = +1
Query: 256 HIHGADSDHRPSPNRDENKDKTKL-VSGNLAKLKDLYGDATDK--GEEASDRLQRDTSTE 426
H+ G+ S+HR SP RD +K+K V NLAKLKDLYGDATDK E RL D TE
Sbjct: 338 HVQGSASEHRSSPFRDASKEKAAASVPSNLAKLKDLYGDATDKKSAENDGSRLHSDYGTE 397
>ref|XP_021303422.1| pre-mRNA splicing factor SR-like 1 isoform X2 [Sorghum bicolor]
gb|KXG21454.1| hypothetical protein SORBI_3009G065100 [Sorghum bicolor]
Length = 365
Score = 57.0 bits (136), Expect = 1e-06
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +1
Query: 274 SDHRPSPNRDENKDKTKLVSGNLAKLKDLYGDATDKGEEA-SDRLQRDTSTE 426
++ R SP RD NK+K VS NLAKLKDLYGD T+K E++ +++L RD+ E
Sbjct: 303 NEQRSSPFRDANKEKAATVSSNLAKLKDLYGDITEKKEDSDAEKLHRDSCAE 354
>ref|XP_002439377.1| pre-mRNA splicing factor SR-like 1 isoform X1 [Sorghum bicolor]
ref|XP_021303419.1| pre-mRNA splicing factor SR-like 1 isoform X1 [Sorghum bicolor]
ref|XP_021303420.1| pre-mRNA splicing factor SR-like 1 isoform X1 [Sorghum bicolor]
ref|XP_021303421.1| pre-mRNA splicing factor SR-like 1 isoform X1 [Sorghum bicolor]
gb|EES17807.1| hypothetical protein SORBI_3009G065100 [Sorghum bicolor]
gb|OQU77546.1| hypothetical protein SORBI_3009G065100 [Sorghum bicolor]
gb|OQU77547.1| hypothetical protein SORBI_3009G065100 [Sorghum bicolor]
Length = 419
Score = 57.0 bits (136), Expect = 1e-06
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +1
Query: 274 SDHRPSPNRDENKDKTKLVSGNLAKLKDLYGDATDKGEEA-SDRLQRDTSTE 426
++ R SP RD NK+K VS NLAKLKDLYGD T+K E++ +++L RD+ E
Sbjct: 357 NEQRSSPFRDANKEKAATVSSNLAKLKDLYGDITEKKEDSDAEKLHRDSCAE 408
>gb|ACN25856.1| unknown [Zea mays]
Length = 251
Score = 55.5 bits (132), Expect = 3e-06
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = +1
Query: 274 SDHRPSPNRDENKDKTKLVSGNLAKLKDLYGDATDKGEEA-SDRLQRDTSTE 426
++ R SP RD NK+K VS NLAKLKDLYGD T K E++ +++L RD+ E
Sbjct: 189 NEQRSSPFRDANKEKAATVSSNLAKLKDLYGDITAKKEDSDAEKLHRDSCAE 240
>gb|AQK84489.1| PRP38 family protein [Zea mays]
Length = 287
Score = 55.5 bits (132), Expect = 3e-06
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = +1
Query: 274 SDHRPSPNRDENKDKTKLVSGNLAKLKDLYGDATDKGEEA-SDRLQRDTSTE 426
++ R SP RD NK+K VS NLAKLKDLYGD T K E++ +++L RD+ E
Sbjct: 225 NEQRSSPFRDANKEKAATVSSNLAKLKDLYGDITAKKEDSDAEKLHRDSCAE 276
>gb|AQK84482.1| PRP38 family protein [Zea mays]
gb|AQK84483.1| PRP38 family protein [Zea mays]
gb|AQK84486.1| PRP38 family protein [Zea mays]
gb|AQK84488.1| PRP38 family protein [Zea mays]
Length = 310
Score = 55.5 bits (132), Expect = 3e-06
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = +1
Query: 274 SDHRPSPNRDENKDKTKLVSGNLAKLKDLYGDATDKGEEA-SDRLQRDTSTE 426
++ R SP RD NK+K VS NLAKLKDLYGD T K E++ +++L RD+ E
Sbjct: 248 NEQRSSPFRDANKEKAATVSSNLAKLKDLYGDITAKKEDSDAEKLHRDSCAE 299
>gb|ACR38001.1| unknown [Zea mays]
Length = 314
Score = 55.5 bits (132), Expect = 3e-06
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = +1
Query: 274 SDHRPSPNRDENKDKTKLVSGNLAKLKDLYGDATDKGEEA-SDRLQRDTSTE 426
++ R SP RD NK+K VS NLAKLKDLYGD T K E++ +++L RD+ E
Sbjct: 248 NEQRSSPFRDANKEKAATVSSNLAKLKDLYGDITAKKEDSDAEKLHRDSCAE 299
>gb|AQK84485.1| PRP38 family protein [Zea mays]
Length = 335
Score = 55.5 bits (132), Expect = 4e-06
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = +1
Query: 274 SDHRPSPNRDENKDKTKLVSGNLAKLKDLYGDATDKGEEA-SDRLQRDTSTE 426
++ R SP RD NK+K VS NLAKLKDLYGD T K E++ +++L RD+ E
Sbjct: 273 NEQRSSPFRDANKEKAATVSSNLAKLKDLYGDITAKKEDSDAEKLHRDSCAE 324
>ref|NP_001169167.1| uncharacterized protein LOC100383017 [Zea mays]
gb|ACN31829.1| unknown [Zea mays]
gb|AQK84484.1| PRP38 family protein [Zea mays]
Length = 422
Score = 55.5 bits (132), Expect = 4e-06
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = +1
Query: 274 SDHRPSPNRDENKDKTKLVSGNLAKLKDLYGDATDKGEEA-SDRLQRDTSTE 426
++ R SP RD NK+K VS NLAKLKDLYGD T K E++ +++L RD+ E
Sbjct: 360 NEQRSSPFRDANKEKAATVSSNLAKLKDLYGDITAKKEDSDAEKLHRDSCAE 411
>ref|XP_008648097.1| uncharacterized protein LOC100383017 isoform X2 [Zea mays]
Length = 426
Score = 55.5 bits (132), Expect = 4e-06
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = +1
Query: 274 SDHRPSPNRDENKDKTKLVSGNLAKLKDLYGDATDKGEEA-SDRLQRDTSTE 426
++ R SP RD NK+K VS NLAKLKDLYGD T K E++ +++L RD+ E
Sbjct: 360 NEQRSSPFRDANKEKAATVSSNLAKLKDLYGDITAKKEDSDAEKLHRDSCAE 411