BLASTX nr result

ID: Cheilocostus21_contig00027512 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00027512
         (617 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009387866.1| PREDICTED: zinc finger CCCH domain-containin...    72   7e-11

>ref|XP_009387866.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like [Musa
            acuminata subsp. malaccensis]
          Length = 1689

 Score = 71.6 bits (174), Expect = 7e-11
 Identities = 57/196 (29%), Positives = 79/196 (40%), Gaps = 9/196 (4%)
 Frame = -2

Query: 562  NIASSVSRLGQTQIENPSYISAPRDILKDTK-----STESPYGWNVAVHSTPNNSQIDVX 398
            +++SS S L Q Q +N    S  + +L+DTK         P G  +A+ ST   SQ D  
Sbjct: 1377 SVSSSGSGLDQNQAKNLECFSGSKCVLEDTKLPSPTPASEPSGRVLAIDSTSGKSQSDTL 1436

Query: 397  XXXXXXXXXXXPNLQGTCTESAGMRNHTSGMVEDAGNRNWVTAPPNPSTCGVAYGTGVLG 218
                       P      T  A   N  S M E A ++ W                    
Sbjct: 1437 GLSDVFVSPLSPIRSDPSTGPAAFGNPASSMAEGASDQGWT------------------- 1477

Query: 217  WGKGDQSKASTVNRVLAQGCSNVAWETA--QETSSETGRIMPKQNSSNVNIGWATPAQGN 44
                             QG +N+ W  +  ++TS+ETG +MPKQ  ++ N  W TPAQGN
Sbjct: 1478 -----------------QGSANIIWGISGQRQTSTETGWMMPKQKRTSANTSWVTPAQGN 1520

Query: 43   STMDLG--VQGNVNMN 2
               +LG   QGN+N N
Sbjct: 1521 REENLGWVTQGNMNPN 1536


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