BLASTX nr result

ID: Cheilocostus21_contig00027457 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00027457
         (465 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009395372.1| PREDICTED: zinc finger CCCH domain-containin...    88   3e-17
ref|XP_009395393.1| PREDICTED: zinc finger CCCH domain-containin...    62   3e-08

>ref|XP_009395372.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like [Musa
            acuminata subsp. malaccensis]
          Length = 2137

 Score = 88.2 bits (217), Expect = 3e-17
 Identities = 73/182 (40%), Positives = 86/182 (47%), Gaps = 29/182 (15%)
 Frame = -2

Query: 464  QKWNVGQNENWAXXXXXXXXSGMDTG----VSPKDANVKFGQAQGQNKQFVSQP------ 315
            QK ++ QNE WA          M+      VSPK+A  K GQAQ QN      P      
Sbjct: 1481 QKSSISQNEKWATRQASWASPKMEVSSRGRVSPKEAIGKSGQAQEQNSPRPLSPLNGNQP 1540

Query: 314  -----------------SSQCYENP-PNWXXXXXXXXXXXK-VALVNESLSHRRNDSPNV 192
                             S   YENP PNW             V  VN+S  HRRN S NV
Sbjct: 1541 PALSYQVIGSQVNTASRSDAYYENPHPNWSSTSQQLPSSTSEVEPVNDSY-HRRNGSTNV 1599

Query: 191  PTPTSQPNSVSWSAVEGFADKHKPSAASAQDITASLVSTSRGREEQESSFTAKEPLRSIT 12
            P PT QP+  S  A EG  +KH PS+AS Q I ++ V+T  GREE +SSFT  EP R I+
Sbjct: 1600 P-PTPQPSKKSLIA-EGSLNKHLPSSASVQAIASAWVNTG-GREEPQSSFTINEPSRGIS 1656

Query: 11   NS 6
            NS
Sbjct: 1657 NS 1658


>ref|XP_009395393.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like [Musa
            acuminata subsp. malaccensis]
          Length = 1988

 Score = 62.4 bits (150), Expect = 3e-08
 Identities = 33/67 (49%), Positives = 42/67 (62%)
 Frame = -2

Query: 206  DSPNVPTPTSQPNSVSWSAVEGFADKHKPSAASAQDITASLVSTSRGREEQESSFTAKEP 27
            DS NV  PT+QP+S  W   EG  +KH  S+AS Q  T++ VSTSRGREE + S    E 
Sbjct: 1276 DSSNVSIPTAQPSSKCWLIAEGSINKHLSSSASLQTTTSASVSTSRGREELQCSLMINES 1335

Query: 26   LRSITNS 6
             RS ++S
Sbjct: 1336 SRSSSHS 1342


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