BLASTX nr result
ID: Cheilocostus21_contig00027457
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cheilocostus21_contig00027457 (465 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 149,584,005 sequences; 54,822,741,787 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_009395372.1| PREDICTED: zinc finger CCCH domain-containin... 88 3e-17 ref|XP_009395393.1| PREDICTED: zinc finger CCCH domain-containin... 62 3e-08 >ref|XP_009395372.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like [Musa acuminata subsp. malaccensis] Length = 2137 Score = 88.2 bits (217), Expect = 3e-17 Identities = 73/182 (40%), Positives = 86/182 (47%), Gaps = 29/182 (15%) Frame = -2 Query: 464 QKWNVGQNENWAXXXXXXXXSGMDTG----VSPKDANVKFGQAQGQNKQFVSQP------ 315 QK ++ QNE WA M+ VSPK+A K GQAQ QN P Sbjct: 1481 QKSSISQNEKWATRQASWASPKMEVSSRGRVSPKEAIGKSGQAQEQNSPRPLSPLNGNQP 1540 Query: 314 -----------------SSQCYENP-PNWXXXXXXXXXXXK-VALVNESLSHRRNDSPNV 192 S YENP PNW V VN+S HRRN S NV Sbjct: 1541 PALSYQVIGSQVNTASRSDAYYENPHPNWSSTSQQLPSSTSEVEPVNDSY-HRRNGSTNV 1599 Query: 191 PTPTSQPNSVSWSAVEGFADKHKPSAASAQDITASLVSTSRGREEQESSFTAKEPLRSIT 12 P PT QP+ S A EG +KH PS+AS Q I ++ V+T GREE +SSFT EP R I+ Sbjct: 1600 P-PTPQPSKKSLIA-EGSLNKHLPSSASVQAIASAWVNTG-GREEPQSSFTINEPSRGIS 1656 Query: 11 NS 6 NS Sbjct: 1657 NS 1658 >ref|XP_009395393.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like [Musa acuminata subsp. malaccensis] Length = 1988 Score = 62.4 bits (150), Expect = 3e-08 Identities = 33/67 (49%), Positives = 42/67 (62%) Frame = -2 Query: 206 DSPNVPTPTSQPNSVSWSAVEGFADKHKPSAASAQDITASLVSTSRGREEQESSFTAKEP 27 DS NV PT+QP+S W EG +KH S+AS Q T++ VSTSRGREE + S E Sbjct: 1276 DSSNVSIPTAQPSSKCWLIAEGSINKHLSSSASLQTTTSASVSTSRGREELQCSLMINES 1335 Query: 26 LRSITNS 6 RS ++S Sbjct: 1336 SRSSSHS 1342