BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00027354
         (999 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PRQ60431.1| putative RNA-directed DNA polymerase [Rosa chinen...   224   3e-62
gb|KYP64759.1| Retrovirus-related Pol polyprotein from transposo...   199   3e-57
dbj|BAT75234.1| hypothetical protein VIGAN_01306600, partial [Vi...   189   5e-55
gb|PNX59811.1| hypothetical protein L195_g051607, partial [Trifo...   190   1e-54
dbj|BAT97420.1| hypothetical protein VIGAN_09086300 [Vigna angul...   191   3e-54
dbj|BAT83770.1| hypothetical protein VIGAN_04098800 [Vigna angul...   189   3e-54
gb|KYP59117.1| Retrovirus-related Pol polyprotein from transposo...   186   9e-54
gb|KYP76811.1| Retrovirus-related Pol polyprotein from transposo...   199   2e-53
gb|KYP76810.1| Retrovirus-related Pol polyprotein from transposo...   199   2e-53
gb|KYP31853.1| Retrovirus-related Pol polyprotein from transposo...   197   1e-52
ref|XP_016499089.1| PREDICTED: uncharacterized protein LOC107817...   181   3e-52
gb|KYP66486.1| Retrovirus-related Pol polyprotein from transposo...   195   5e-52
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]         194   7e-52
gb|OTG02614.1| putative zinc finger, CCHC-type, Ribonuclease H-l...   191   1e-51
ref|XP_016647234.1| PREDICTED: retrovirus-related Pol polyprotei...   184   1e-51
gb|PON98554.1| Zinc finger, CCHC-type, partial [Trema orientalis]     180   4e-51
emb|CAN66809.1| hypothetical protein VITISV_010919 [Vitis vinifera]   192   4e-51
gb|KYP63999.1| Retrovirus-related Pol polyprotein from transposo...   180   5e-51
gb|KYP64043.1| Retrovirus-related Pol polyprotein from transposo...   180   1e-50
gb|KYP37153.1| Retrovirus-related Pol polyprotein from transposo...   176   4e-50

>gb|PRQ60431.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1340

 Score =  224 bits (572), Expect = 3e-62
 Identities = 117/245 (47%), Positives = 154/245 (62%), Gaps = 3/245 (1%)
 Frame = +3

Query: 261 MVILNGENWLIWKAKMEDYLYCKDLFDAIEHET-KPEKISDEDWSKLNRKAISHIRQWVE 437
           M+ LN  NW+ WK +MED LYCKDL + I  E  KPE  S   W+K+NRKAI +IR+WV+
Sbjct: 8   MIRLNHSNWITWKPRMEDILYCKDLHEPIVGEAAKPEGTSVPTWTKMNRKAIGYIREWVD 67

Query: 438 DSIFHHIVNEKEAYKLWRKLEDLYERKTAGNKAFLIRKLVNLKYKEGAKIIEHLNDMKGI 617
           DS+FHH+ NE  A +LW KL  L+E+KTA  KAFLI++LVN+KYK+G ++ EHLN+ +  
Sbjct: 68  DSVFHHVSNETNARELWLKLTSLFEKKTAAKKAFLIKELVNMKYKDGVRVTEHLNNFQST 127

Query: 618 INQLASMKMVIXXXXXXXXXXXXXXXXXXXXVVSLSNAAPDGKVSMNLVTSSLLNEETRR 797
           INQLA+M M I                    VV++SN+APDG +SM+ V +++LNEETRR
Sbjct: 128 INQLATMDMKIDDELQALLLLGSLPDNWETFVVTVSNSAPDGVLSMDNVKNNMLNEETRR 187

Query: 798 --LSIEKPQALVIETRGRSKSRSTYQHGXXXXXXXXXXDIECYYCHKKGHIKKYCWSFKK 971
              S +  Q  V E RGRSKSR    HG          + +C++C   GH+KK C   KK
Sbjct: 188 KSSSSDNSQVFVTEHRGRSKSRGPKGHGRSMSRSRTRFNGKCHHCGIFGHMKKNCNKLKK 247

Query: 972 AQKEG 986
             KEG
Sbjct: 248 DPKEG 252


>gb|KYP64759.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 369

 Score =  199 bits (505), Expect = 3e-57
 Identities = 108/249 (43%), Positives = 149/249 (59%), Gaps = 9/249 (3%)
 Frame = +3

Query: 261 MVILNGENWLIWKAKMEDYLYCKDLFDAIEHETKPEKISDEDWSKLNRKAISHIRQWVED 440
           M  L   N+  WK  MED+LYCKDL + I ++ K E  SD  W  LNRKA++ IR++++ 
Sbjct: 1   MFKLTANNYSYWKPMMEDHLYCKDLHEPIIYKEKVEGKSDAQWELLNRKAVAMIRKYIDK 60

Query: 441 SIFHHIVNEKEAYKLWRKLEDLYERKTAGNKAFLIRKLVNLKYKEGAKIIEHLNDMKGII 620
           S+F H+     AY+LW KLE + ++KT  NKA L+R+LV L+YK+G  +IEHLN+ KG++
Sbjct: 61  SLFEHVSTYTNAYELWAKLESMIQKKTPRNKANLVRRLVKLEYKDGHSMIEHLNNFKGLV 120

Query: 621 NQLASMKMVIXXXXXXXXXXXXXXXXXXXXVVSLSNAAPDGKVSMNLVTSSLLNEETRRL 800
           NQL  ++M I                    VV+LSN+AP+GK++M+ V+ SLL EE+RR+
Sbjct: 121 NQLTKIEMKIDDELQALLLLSSLPESWDTLVVTLSNSAPEGKLTMDAVSDSLLGEESRRM 180

Query: 801 SIEK---PQALVI------ETRGRSKSRSTYQHGXXXXXXXXXXDIECYYCHKKGHIKKY 953
              +   P+A +I      ETRGRSKSR  YQ             I CYYC + GH K  
Sbjct: 181 ERGESIHPEANIIENRGKNETRGRSKSRDQYQ---SRGRSKSRSKITCYYCGRMGHRKME 237

Query: 954 CWSFKKAQK 980
           C SFK+ QK
Sbjct: 238 CRSFKRDQK 246


>dbj|BAT75234.1| hypothetical protein VIGAN_01306600, partial [Vigna angularis var.
           angularis]
          Length = 251

 Score =  189 bits (480), Expect = 5e-55
 Identities = 100/246 (40%), Positives = 144/246 (58%), Gaps = 4/246 (1%)
 Frame = +3

Query: 261 MVILNGENWLIWKAKMEDYLYCKDLFDAIEHETKPEKISDEDWSKLNRKAISHIRQWVED 440
           M  L  +N+  WK  MED+LYCKDL++ I +   PE  +++DW  LNRK ++ IR++++ 
Sbjct: 5   MFKLTADNYSYWKPMMEDHLYCKDLYEPITNPEIPEGKAEKDWEILNRKTVAMIRKYIDR 64

Query: 441 SIFHHIVNEKEAYKLWRKLEDLYERKTAGNKAFLIRKLVNLKYKEGAKIIEHLNDMKGII 620
           S+F H+     AY+LW KL+ + ++KT  NKA L+R+LV L+Y +   +IEHLN  KGI+
Sbjct: 65  SLFEHVSTYTNAYELWTKLDSMIQKKTPRNKAHLVRRLVKLEYTDDQNMIEHLNTFKGIV 124

Query: 621 NQLASMKMVIXXXXXXXXXXXXXXXXXXXXVVSLSNAAPDGKVSMNLVTSSLLNEETRRL 800
           NQL    M I                    VV+LSN+APDGK+S++ +T SLLNEE+RR 
Sbjct: 125 NQLMKADMKIDDELQALLLLSSLPESWDTLVVTLSNSAPDGKLSLDNITDSLLNEESRRK 184

Query: 801 ---SIEKPQALVIETRGRSKSRST-YQHGXXXXXXXXXXDIECYYCHKKGHIKKYCWSFK 968
              S    +A V+E RGRS++RS   +             + C+YC K GH K+ C   K
Sbjct: 185 ERGSSSHSEANVVENRGRSENRSKGKREKSRGRFKSRSKGLTCFYCGKDGHKKQECRFLK 244

Query: 969 KAQKEG 986
           + QK G
Sbjct: 245 RDQKNG 250


>gb|PNX59811.1| hypothetical protein L195_g051607, partial [Trifolium pratense]
          Length = 323

 Score =  190 bits (483), Expect = 1e-54
 Identities = 101/252 (40%), Positives = 152/252 (60%), Gaps = 5/252 (1%)
 Frame = +3

Query: 243 MEIGN-RMVILNGENWLIWKAKMEDYLYCKDLFDAIEHETKPEKISDEDWSKLNRKAISH 419
           ME+   RMV LN  N+ +WK+KMED LY K+  + +    KP   +D++W+ L+R+   +
Sbjct: 1   MEVNTTRMVTLNESNYALWKSKMEDLLYVKNFHEPVFATEKPTGKTDDEWTLLHRQVCGY 60

Query: 420 IRQWVEDSIFHHIVNEKEAYKLWRKLEDLYERKTAGNKAFLIRKLVNLKYKEGAKIIEHL 599
           IRQWV+D++ +HI  EK A  LW KLE LY +KT  NK +LI+K+++L+ +EG    +HL
Sbjct: 61  IRQWVDDNVLNHISGEKHAKSLWDKLEQLYAKKTGNNKMYLIKKMLSLRIQEGTSCADHL 120

Query: 600 NDMKGIINQLASMKMVIXXXXXXXXXXXXXXXXXXXXVVSLSNAAPDGKVSMNLVTSSLL 779
           N  +GI+NQL++M +                       +SLSN+A DG +SM+LV SS+L
Sbjct: 121 NTFQGIMNQLSAMGIKFDDEIQGLFLLGSLPDSWETFRMSLSNSAADGVLSMDLVKSSVL 180

Query: 780 NEETRRLSIE---KPQALVIETRGRSKSRSTYQHG-XXXXXXXXXXDIECYYCHKKGHIK 947
           NEE RR+S +   + + LV ++RGR+K+R +   G           ++ECY C +KGHI+
Sbjct: 181 NEEMRRMSQDSSTQSEVLVYQSRGRNKNRYSNNKGQGRSYSKNRYTNVECYNCGRKGHIQ 240

Query: 948 KYCWSFKKAQKE 983
           K C   KK  K+
Sbjct: 241 KDCRLLKKDDKD 252


>dbj|BAT97420.1| hypothetical protein VIGAN_09086300 [Vigna angularis var.
           angularis]
          Length = 378

 Score =  191 bits (485), Expect = 3e-54
 Identities = 101/246 (41%), Positives = 145/246 (58%), Gaps = 4/246 (1%)
 Frame = +3

Query: 261 MVILNGENWLIWKAKMEDYLYCKDLFDAIEHETKPEKISDEDWSKLNRKAISHIRQWVED 440
           M  L  +N+  WK  MED+LYCKDL++ I +   PE  +++DW  LNRK ++ IR++++ 
Sbjct: 5   MFKLTADNYSYWKPMMEDHLYCKDLYEPITNLEIPEGKTEKDWEILNRKTVAMIRKYIDK 64

Query: 441 SIFHHIVNEKEAYKLWRKLEDLYERKTAGNKAFLIRKLVNLKYKEGAKIIEHLNDMKGII 620
           S+F H+    +AY+LW KLE + ++KT  NKA L+R+LV L+Y +   +IEHLN  KGI+
Sbjct: 65  SLFEHVSTYTDAYELWTKLESMIQKKTPRNKAHLVRRLVKLEYSDDQNMIEHLNTFKGIV 124

Query: 621 NQLASMKMVIXXXXXXXXXXXXXXXXXXXXVVSLSNAAPDGKVSMNLVTSSLLNEETRRL 800
           NQL    M I                    VV+LSN+APDGK+S++ +T SLLNEE+RR 
Sbjct: 125 NQLMKADMKIDDELQALLLISSLPESWDTLVVTLSNSAPDGKLSLDNITDSLLNEESRRK 184

Query: 801 ---SIEKPQALVIETRGRSKSRST-YQHGXXXXXXXXXXDIECYYCHKKGHIKKYCWSFK 968
              S    +A V+E RGRS++RS   +             + C+YC K GH K+ C   K
Sbjct: 185 ERGSSSHSEANVVENRGRSENRSKGKREKSRGRFKSRSKGLTCFYCGKDGHKKQECRFLK 244

Query: 969 KAQKEG 986
           + QK G
Sbjct: 245 RDQKNG 250


>dbj|BAT83770.1| hypothetical protein VIGAN_04098800 [Vigna angularis var.
           angularis]
          Length = 302

 Score =  189 bits (479), Expect = 3e-54
 Identities = 100/246 (40%), Positives = 143/246 (58%), Gaps = 4/246 (1%)
 Frame = +3

Query: 261 MVILNGENWLIWKAKMEDYLYCKDLFDAIEHETKPEKISDEDWSKLNRKAISHIRQWVED 440
           M  L  +N+  WK  MED+LYCKDL++ I +   PE  +++DW  LNRK ++ IR++++ 
Sbjct: 5   MFKLTADNYSYWKPMMEDHLYCKDLYEPITNLEIPEGKTEKDWEILNRKTVAMIRKYIDK 64

Query: 441 SIFHHIVNEKEAYKLWRKLEDLYERKTAGNKAFLIRKLVNLKYKEGAKIIEHLNDMKGII 620
           S+F H+    +AY+LW KLE + ++KT  NKA L+R+LV L+Y +   +IEHLN  KGI+
Sbjct: 65  SLFEHVSTYTDAYELWTKLESIIQKKTPRNKAHLVRRLVKLEYSDDQNMIEHLNTFKGIV 124

Query: 621 NQLASMKMVIXXXXXXXXXXXXXXXXXXXXVVSLSNAAPDGKVSMNLVTSSLLNEETRRL 800
           NQL    M I                    VV+LSN+ PDGK+S++ +T SLLNEE+RR 
Sbjct: 125 NQLMKADMKIDDELQALLLLSSLPESWDTLVVTLSNSTPDGKLSLDNITDSLLNEESRRK 184

Query: 801 ---SIEKPQALVIETRGRSKSRST-YQHGXXXXXXXXXXDIECYYCHKKGHIKKYCWSFK 968
              S    +A V+E RGRS++RS   +             + C+YC K GH K  C   K
Sbjct: 185 ERGSSSHSEANVVENRGRSENRSKGKREKSRGRFKSRSKGLTCFYCGKDGHKKPECRFLK 244

Query: 969 KAQKEG 986
           + QK G
Sbjct: 245 RDQKNG 250


>gb|KYP59117.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 256

 Score =  186 bits (472), Expect = 9e-54
 Identities = 99/240 (41%), Positives = 143/240 (59%), Gaps = 10/240 (4%)
 Frame = +3

Query: 306 MEDYLYCKDLFDAIE-HETKPEKISDEDWSKLNRKAISHIRQWVEDSIFHHIVNEKEAYK 482
           MED L+C+DL+D IE + TKP   S EDW K NRK I  IRQW++  I+HH+ +E  A+ 
Sbjct: 1   MEDLLFCRDLYDPIEANGTKPANKSKEDWKKANRKTIGMIRQWIDQRIYHHVSSETNAFN 60

Query: 483 LWRKLEDLYERKTAGNKAFLIRKLVNLKYKEGAKIIEHLNDMKGIINQLASMKMVIXXXX 662
           L +KL +L+E K A NK F IRKLVNLKYK+G+ + EHL + + ++NQL ++K+V+    
Sbjct: 61  LCKKLSELFESKNAQNKVFHIRKLVNLKYKDGSSVAEHLRNFQNLVNQLNTVKLVLDDEL 120

Query: 663 XXXXXXXXXXXXXXXXVVSLSNAAPDGKVSMNLVTSSLLNEETRR------LSIEKPQAL 824
                           VVSLSN+A +GK++ N+   SLLNE+TRR       S    +AL
Sbjct: 121 LALLLLSSLPDSWETLVVSLSNSAFNGKLTFNMFKDSLLNEKTRRKGQRMASSSTHNEAL 180

Query: 825 VIETRGRSKSRSTYQ---HGXXXXXXXXXXDIECYYCHKKGHIKKYCWSFKKAQKEGNSS 995
           V+E+RGRS  R++++   H           DI+C++  K GH+ K C   K+ +  G  +
Sbjct: 181 VMESRGRSHQRNSHRYNYHSKLKGRSRTRKDIQCFHYDKMGHVMKECRFLKQDKSRGRGN 240


>gb|KYP76811.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1305

 Score =  199 bits (505), Expect = 2e-53
 Identities = 108/249 (43%), Positives = 149/249 (59%), Gaps = 9/249 (3%)
 Frame = +3

Query: 261 MVILNGENWLIWKAKMEDYLYCKDLFDAIEHETKPEKISDEDWSKLNRKAISHIRQWVED 440
           M  L   N+  WK  MED+LYCKDL + I ++ K E  SD  W  LNRKA++ IR++++ 
Sbjct: 11  MFKLTANNYSYWKPMMEDHLYCKDLHEPIIYKEKVEGKSDAQWELLNRKAVAMIRKYIDK 70

Query: 441 SIFHHIVNEKEAYKLWRKLEDLYERKTAGNKAFLIRKLVNLKYKEGAKIIEHLNDMKGII 620
           S+F H+     AY+LW KLE + ++KT  NKA L+R+LV L+YK+G  +IEHLN+ KG++
Sbjct: 71  SLFEHVSTYTNAYELWAKLESMIQKKTPRNKANLVRRLVKLEYKDGHSMIEHLNNFKGLV 130

Query: 621 NQLASMKMVIXXXXXXXXXXXXXXXXXXXXVVSLSNAAPDGKVSMNLVTSSLLNEETRRL 800
           NQL  ++M I                    VV+LSN+AP+GK++M+ V+ SLL EE+RR+
Sbjct: 131 NQLTKIEMKIDDELQALLLLSSLPESWDTLVVTLSNSAPEGKLTMDAVSDSLLGEESRRM 190

Query: 801 SIEK---PQALVI------ETRGRSKSRSTYQHGXXXXXXXXXXDIECYYCHKKGHIKKY 953
              +   P+A +I      ETRGRSKSR  YQ             I CYYC + GH K  
Sbjct: 191 ERGESIHPEANIIENRGKNETRGRSKSRDQYQ---SRGRSKSRSKITCYYCGRMGHRKME 247

Query: 954 CWSFKKAQK 980
           C SFK+ QK
Sbjct: 248 CRSFKRDQK 256


>gb|KYP76810.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1305

 Score =  199 bits (505), Expect = 2e-53
 Identities = 108/249 (43%), Positives = 149/249 (59%), Gaps = 9/249 (3%)
 Frame = +3

Query: 261 MVILNGENWLIWKAKMEDYLYCKDLFDAIEHETKPEKISDEDWSKLNRKAISHIRQWVED 440
           M  L   N+  WK  MED+LYCKDL + I ++ K E  SD  W  LNRKA++ IR++++ 
Sbjct: 11  MFKLTANNYSYWKPMMEDHLYCKDLHEPIIYKEKVEGKSDAQWELLNRKAVAMIRKYIDK 70

Query: 441 SIFHHIVNEKEAYKLWRKLEDLYERKTAGNKAFLIRKLVNLKYKEGAKIIEHLNDMKGII 620
           S+F H+     AY+LW KLE + ++KT  NKA L+R+LV L+YK+G  +IEHLN+ KG++
Sbjct: 71  SLFEHVSTYTNAYELWAKLESMIQKKTPRNKANLVRRLVKLEYKDGHSMIEHLNNFKGLV 130

Query: 621 NQLASMKMVIXXXXXXXXXXXXXXXXXXXXVVSLSNAAPDGKVSMNLVTSSLLNEETRRL 800
           NQL  ++M I                    VV+LSN+AP+GK++M+ V+ SLL EE+RR+
Sbjct: 131 NQLTKIEMKIDDELQALLLLSSLPESWDTLVVTLSNSAPEGKLTMDAVSDSLLGEESRRM 190

Query: 801 SIEK---PQALVI------ETRGRSKSRSTYQHGXXXXXXXXXXDIECYYCHKKGHIKKY 953
              +   P+A +I      ETRGRSKSR  YQ             I CYYC + GH K  
Sbjct: 191 ERGESIHPEANIIENRGKNETRGRSKSRDQYQ---SRGRSKSRSKITCYYCGRMGHRKME 247

Query: 954 CWSFKKAQK 980
           C SFK+ QK
Sbjct: 248 CRSFKRDQK 256


>gb|KYP31853.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1314

 Score =  197 bits (500), Expect = 1e-52
 Identities = 103/245 (42%), Positives = 145/245 (59%), Gaps = 3/245 (1%)
 Frame = +3

Query: 261 MVILNGENWLIWKAKMEDYLYCKDLFDAIEHETKPEKISDEDWSKLNRKAISHIRQWVED 440
           M  L  +N+  WK  MED+LYCKDL++ I  ++KPE  +D+DW  LNRKA++ IR++++ 
Sbjct: 1   MFKLTADNFSYWKPMMEDHLYCKDLYEPITQQSKPEGKTDKDWEILNRKAVAVIRKYIDR 60

Query: 441 SIFHHIVNEKEAYKLWRKLEDLYERKTAGNKAFLIRKLVNLKYKEGAKIIEHLNDMKGII 620
           S+F H+     AY+LW KLE L ++KT  NKA L R+L  L+Y +G  +IEHLN  KG++
Sbjct: 61  SLFEHVSTYTNAYELWTKLESLIQKKTPRNKAHLYRRLAKLEYMDGQNMIEHLNTFKGLV 120

Query: 621 NQLASMKMVIXXXXXXXXXXXXXXXXXXXXVVSLSNAAPDGKVSMNLVTSSLLNEETRRL 800
           NQL   ++ I                    +++LSN+AP+GK+S++ VT SLLNEE+RR 
Sbjct: 121 NQLKKAEINIDDEVQTLMLFSSLPESWDTLIITLSNSAPEGKLSLDSVTDSLLNEESRRR 180

Query: 801 S---IEKPQALVIETRGRSKSRSTYQHGXXXXXXXXXXDIECYYCHKKGHIKKYCWSFKK 971
                 + +A VI+ RGRSK+R     G           I CYYC K GH K  C   KK
Sbjct: 181 ERGLNNQFEANVIDNRGRSKNREKGGRGKSQGRSKSRTRICCYYCGKPGHRKSECRFLKK 240

Query: 972 AQKEG 986
            Q+ G
Sbjct: 241 DQQAG 245


>ref|XP_016499089.1| PREDICTED: uncharacterized protein LOC107817738, partial [Nicotiana
           tabacum]
          Length = 219

 Score =  181 bits (459), Expect = 3e-52
 Identities = 91/203 (44%), Positives = 128/203 (63%), Gaps = 3/203 (1%)
 Frame = +3

Query: 261 MVILNGENWLIWKAKMEDYLYCKDLFDAIEHETK-PEKISDEDWSKLNRKAISHIRQWVE 437
           M+ L   N+ +W+ +MED L CKDLFD IE + + P+   + +W KLNRK I  IRQW++
Sbjct: 10  MIKLTATNYTLWRPRMEDLLSCKDLFDPIEAKGRNPDSTKEAEWKKLNRKTIGQIRQWID 69

Query: 438 DSIFHHIVNEKEAYKLWRKLEDLYERKTAGNKAFLIRKLVNLKYKEGAKIIEHLNDMKGI 617
           DS+FHH+  E +AY LW KLE +Y+ KTA NK  L+R+LVNLK K G  + EH ++ + +
Sbjct: 70  DSVFHHVAQETDAYALWVKLEGMYQAKTARNKTLLMRRLVNLKLKHGTSVAEHTSEFQSL 129

Query: 618 INQLASMKMVIXXXXXXXXXXXXXXXXXXXXVVSLSNAAPDGKVSMNLVTSSLLNEETRR 797
           INQL+S+ M +                    VVSLSN+AP G ++M++V  +L NEE RR
Sbjct: 130 INQLSSVDMPLGDEMQALLLLSSLPDSWETLVVSLSNSAPSGNLTMSMVKDALFNEEARR 189

Query: 798 LSIE--KPQALVIETRGRSKSRS 860
             I+  +  AL+IE RGR + RS
Sbjct: 190 KDIDHGESHALIIE-RGRQQERS 211


>gb|KYP66486.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1321

 Score =  195 bits (495), Expect = 5e-52
 Identities = 106/248 (42%), Positives = 148/248 (59%), Gaps = 3/248 (1%)
 Frame = +3

Query: 261 MVILNGENWLIWKAKMEDYLYCKDLFDAIEHE-TKPEKISDEDWSKLNRKAISHIRQWVE 437
           MV L   N+ +WK+ MED L   DL+D IE + +KPEK+SD DW KL +K +S IRQWV+
Sbjct: 8   MVKLTATNYSLWKSMMEDRLNLLDLYDPIEGDGSKPEKMSDGDWKKLKKKTLSTIRQWVD 67

Query: 438 DSIFHHIVNEKEAYKLWRKLEDLYERKTAGNKAFLIRKLVNLKYKEGAKIIEHLNDMKGI 617
            ++++ +  E +   LW+KLE +YE K A +K F++RKL+NLK +EG  + EHLND +G+
Sbjct: 68  ITLYNQVSKETDPQVLWKKLESMYETKNAQSKIFMMRKLMNLKLQEGRAVAEHLNDFEGL 127

Query: 618 INQLASMKMVIXXXXXXXXXXXXXXXXXXXXVVSLSNAAPDGKVSMNLVTSSLLNEETRR 797
           + QL S  + +                    VVSLSN+AP+GKVS+N+V +S+LNEE RR
Sbjct: 128 VMQLISAGLTLEDEMQALLLLGSLPDSWDTLVVSLSNSAPEGKVSLNMVRNSILNEEIRR 187

Query: 798 LSIEKPQ--ALVIETRGRSKSRSTYQHGXXXXXXXXXXDIECYYCHKKGHIKKYCWSFKK 971
             + K +  ALV E R RSKSR+   H              CY C K GH+KK C   KK
Sbjct: 188 RDVAKNETHALVTERRSRSKSRTPRGHRDHSKSRERR---SCYNCGKPGHLKKNCRFLKK 244

Query: 972 AQKEGNSS 995
             ++ N +
Sbjct: 245 EIQDKNQA 252


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score =  194 bits (494), Expect = 7e-52
 Identities = 102/252 (40%), Positives = 148/252 (58%), Gaps = 7/252 (2%)
 Frame = +3

Query: 255 NRMVILNGENWLIWKAKMEDYLYCKDLFDAIEHETKPEKISDEDWSKLNRKAISHIRQWV 434
           + MV LNG N+ IWKAKM+D L+ K L   +    KPE +SDE+W   +++   +IRQWV
Sbjct: 6   SNMVRLNGRNYHIWKAKMKDLLFVKKLHLPVFASAKPENMSDEEWDFEHQQVCGYIRQWV 65

Query: 435 EDSIFHHIVNEKEAYKLWRKLEDLYERKTAGNKAFLIRKLVNLKYKEGAKIIEHLNDMKG 614
           ED++ +HI+NE  A  LW KLE LY  KT  NK FL+++++N++Y+EG  I +H+ND +G
Sbjct: 66  EDNVLNHIINETHARSLWNKLETLYASKTGNNKLFLLKQMMNIRYREGTLINDHVNDFQG 125

Query: 615 IINQLASMKMVIXXXXXXXXXXXXXXXXXXXXVVSLSNAAPDGKVSMNLVTSSLLNEETR 794
           +++QL+ M +                       VSL+N+AP+G V+M  V S +LNEE R
Sbjct: 126 VLDQLSGMGIKFEDEVLGLWLLNTLPDSWETFRVSLTNSAPNGVVTMEYVKSGILNEEAR 185

Query: 795 R----LSIEKPQALVIETRGRSKSRSTYQHG---XXXXXXXXXXDIECYYCHKKGHIKKY 953
           R     S  +   LV + RGR+K +   Q G             DIEC+YC KK HIKKY
Sbjct: 186 RRSQDTSTSQSDILVTDDRGRNKQKG--QRGRDKSRSKSRSRYKDIECHYCGKKSHIKKY 243

Query: 954 CWSFKKAQKEGN 989
            + +K+ +K+ N
Sbjct: 244 SFKWKREKKQDN 255


>gb|OTG02614.1| putative zinc finger, CCHC-type, Ribonuclease H-like domain,
           GAG-pre-integrase domain protein [Helianthus annuus]
          Length = 702

 Score =  191 bits (485), Expect = 1e-51
 Identities = 101/249 (40%), Positives = 143/249 (57%), Gaps = 4/249 (1%)
 Frame = +3

Query: 255 NRMVILNGENWLIWKAKMEDYLYCKDLFDAIEHETKPEKISDEDWSKLNRKAISHIRQWV 434
           +R+V LNG N+ +WK KMED LY KD +  + +  KP   +DE+W+ L+RK   +IRQWV
Sbjct: 6   SRIVNLNGSNYHVWKGKMEDLLYVKDYYMPVFNTDKPGDKTDEEWNILHRKVCGYIRQWV 65

Query: 435 EDSIFHHIVNEKEAYKLWRKLEDLYERKTAGNKAFLIRKLVNLKYKEGAKIIEHLNDMKG 614
           +D++ +HI  E  A  LW KLE+LY RKT  NK FLI++L+NLKY +G  + +HLN  +G
Sbjct: 66  DDNVLNHISGETHARTLWNKLEELYARKTGNNKLFLIKQLINLKYNDGTPVSDHLNVFQG 125

Query: 615 IINQLASMKMVIXXXXXXXXXXXXXXXXXXXXVVSLSNAAPDGKVSMNLVTSSLLNEETR 794
           IINQLA M +                        SLSN+A +G ++M +   S+LNEE R
Sbjct: 126 IINQLAGMGIKFEDEVQGLWLLGTLPDSWETFRTSLSNSAANGIITMEMAKGSVLNEEMR 185

Query: 795 RL---SIEKPQALVIETRGRSKSRS-TYQHGXXXXXXXXXXDIECYYCHKKGHIKKYCWS 962
           R    S      LV E+RGR +SR  + +            D EC++C +KGH  K+C  
Sbjct: 186 RKSQGSSSHSDVLVTESRGRGQSRGPSNKEKHRSKSRGKFADYECHHCGRKGHTIKFCRQ 245

Query: 963 FKKAQKEGN 989
            KK +K+ +
Sbjct: 246 LKKEKKKAD 254



 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
 Frame = +3

Query: 717 SLSNAAPDGKVSMNLVTSSLLNEETRRLS---IEKPQALVIETRGRSKSRS-TYQHGXXX 884
           SLSN+A +G ++M +   S+LNEE RR S         LV E+RGR +SR  + +     
Sbjct: 295 SLSNSAANGIITMEMAKGSVLNEEMRRKSQGSSSHSDVLVTESRGRGQSRGPSNKEKHRS 354

Query: 885 XXXXXXXDIECYYCHKKGHIKKYCWSFKKAQKEGN 989
                  D EC++C +KGH  K+C   KK +K+ +
Sbjct: 355 KSRGKFADYECHHCGRKGHTIKFCRQLKKEKKKAD 389


>ref|XP_016647234.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Prunus mume]
          Length = 394

 Score =  184 bits (468), Expect = 1e-51
 Identities = 98/242 (40%), Positives = 137/242 (56%), Gaps = 11/242 (4%)
 Frame = +3

Query: 297 KAKMEDYLYCKDLFDAIEHETKPEKISDEDWSKLNRKAISHIRQWVEDSIFHHIVNEKEA 476
           K  +++ + CK     +    KPE  SD  WS LNRK +  IRQWV+ S+FHH+  E +A
Sbjct: 81  KCALKESVTCKKPLQLLGQ--KPEGKSDNAWSILNRKVVGQIRQWVDQSVFHHVAQETDA 138

Query: 477 YKLWRKLEDLYERKTAGNKAFLIRKLVNLKYKEGAKIIEHLNDMKGIINQLASMKMVIXX 656
           YKLW KL  +YERKT  NKA +IR+LVNLKY++G  + EHL D +G+IN L +MKMV+  
Sbjct: 139 YKLWTKLSSMYERKTTQNKASVIRRLVNLKYRDGRSVTEHLRDFQGLINLLTNMKMVLDD 198

Query: 657 XXXXXXXXXXXXXXXXXXVVSLSNAAPDGKVSMNLVTSSLLNEETRRLS---IEKPQALV 827
                             VVSLSN+AP G +++++V  S+ NEE RR     + + +ALV
Sbjct: 199 ELQALVLLSSLPDSWDTLVVSLSNSAPQGVLTLDIVKDSMFNEEARRKEQGVVAESEALV 258

Query: 828 IETRGRSKSRSTYQ--------HGXXXXXXXXXXDIECYYCHKKGHIKKYCWSFKKAQKE 983
            E RGR+ +R  ++                    D+ECY+C   GH+K+ C  FK+ Q  
Sbjct: 259 SEYRGRTNNRKFHRQDKSKGRSRDGLRGRSKTRKDLECYHCGGIGHMKRECRLFKREQDR 318

Query: 984 GN 989
           GN
Sbjct: 319 GN 320


>gb|PON98554.1| Zinc finger, CCHC-type, partial [Trema orientalis]
          Length = 277

 Score =  180 bits (456), Expect = 4e-51
 Identities = 94/247 (38%), Positives = 141/247 (57%), Gaps = 11/247 (4%)
 Frame = +3

Query: 249 IGNRMVILNGENWLIWKAKMEDYLYCKDLFDAIE-HETKPEKISDEDWSKLNRKAISHIR 425
           +GN M+ LN  NW+IWK +MEDYLYC+DL   IE  E +P++ISDE+W  LNR+A++ IR
Sbjct: 5   VGNAMMKLNNSNWVIWKPRMEDYLYCEDLHKPIEGDEARPKEISDEEWYVLNRRAVAKIR 64

Query: 426 QWVEDSIFHHIVNEKEAYKLWRKLEDLYERKTAGNKAFLIRKLVNLKYKEGAKIIEHLND 605
           QWV+ S+F+++  E  A +LW  LE L+E+KT   K  LI+ L+N+KY++G   I+H+N+
Sbjct: 65  QWVDHSLFNYVALETNARELWLILESLFEKKTVAVKVSLIKSLMNMKYEKGMSTIKHMNN 124

Query: 606 MKGIINQLASMKMVIXXXXXXXXXXXXXXXXXXXXVVSLSNAAPDGKVSMNLVTSSLLNE 785
            +G+ NQL +   V+                    V S+ ++AP+G +SM  V   L  E
Sbjct: 125 FQGLFNQLCATDWVLDDEVKALMFLSSLSNEWETFVSSVCDSAPNGVLSMGFVRDKLFEE 184

Query: 786 ETRR----LSIEKPQAL------VIETRGRSKSRSTYQHGXXXXXXXXXXDIECYYCHKK 935
           ETRR    L + +  +         E RGRS++R                   CY+C K+
Sbjct: 185 ETRRKIAGLGLTRGSSSGDRNDGDRENRGRSQNRGFRNQSRSRGRSQVKDRRRCYHCGKE 244

Query: 936 GHIKKYC 956
           GHI+++C
Sbjct: 245 GHIRRHC 251


>emb|CAN66809.1| hypothetical protein VITISV_010919 [Vitis vinifera]
          Length = 1183

 Score =  192 bits (488), Expect = 4e-51
 Identities = 99/247 (40%), Positives = 138/247 (55%), Gaps = 3/247 (1%)
 Frame = +3

Query: 255 NRMVILNGENWLIWKAKMEDYLYCKDLFDAIEHETKPEKISDEDWSKLNRKAISHIRQWV 434
           +RM+ +NG N+ +WK KMED LY KD +  +    KPE  +D  W  L+R    +IRQWV
Sbjct: 6   SRMITVNGSNYHVWKGKMEDLLYAKDYYLLVFASEKPENKTDAKWDLLHRHVCGYIRQWV 65

Query: 435 EDSIFHHIVNEKEAYKLWRKLEDLYERKTAGNKAFLIRKLVNLKYKEGAKIIEHLNDMKG 614
           ++++ +H+  EK A  LW KLE LY RKT  NK FLI+K+++LKY++   + +HLN  +G
Sbjct: 66  DNNVLNHVSEEKHARSLWNKLEQLYARKTGNNKLFLIKKMISLKYQDETTMTDHLNTFQG 125

Query: 615 IINQLASMKMVIXXXXXXXXXXXXXXXXXXXXVVSLSNAAPDGKVSMNLVTSSLLNEETR 794
           IINQL  M +                        SLSN+APDG ++M+LV S +LNEE  
Sbjct: 126 IINQLVRMNIKFEEEMQGLWLLGTLSDSWETFRTSLSNSAPDGTMNMDLVKSCVLNEEMG 185

Query: 795 RL---SIEKPQALVIETRGRSKSRSTYQHGXXXXXXXXXXDIECYYCHKKGHIKKYCWSF 965
           R    S  +   LV + + RSKSR                ++EC+Y H KGHI KYC   
Sbjct: 186 RKSQGSSSQLDVLVTKKKERSKSRGPNNRDRRKSKTNKFANVECHYFHLKGHIVKYCRQL 245

Query: 966 KKAQKEG 986
           K+  K+G
Sbjct: 246 KRDMKQG 252


>gb|KYP63999.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 296

 Score =  180 bits (457), Expect = 5e-51
 Identities = 100/258 (38%), Positives = 155/258 (60%), Gaps = 12/258 (4%)
 Frame = +3

Query: 261 MVILNGENWLIWKAKMEDYLYCKDLFDAIE-HETKPEKISDEDWSKLNRKAISHIRQWVE 437
           M+ L+  N+ IWK++M+D L+ KD+ D IE + TKP   S+ED  K N+K I  I+Q ++
Sbjct: 1   MIKLDCTNYSIWKSRMKDLLFYKDMNDPIEANGTKP---SEEDRKKTNKKTIDMIKQLID 57

Query: 438 DSIFHHIVNEKEAYKLWRKLEDLYERKTAGNKAFLIRKLVNLKYKEGAKIIEHLNDMKGI 617
            SI+HH+ ++   + LW+KL +L+E K A NKAFLIRKLVNLKY +G  + +HL++ + +
Sbjct: 58  QSIYHHVSSDVNPFNLWKKLSELFESKNAQNKAFLIRKLVNLKYNDGFLMAKHLSNFQNL 117

Query: 618 INQLASMKMVIXXXXXXXXXXXXXXXXXXXXVVSLSNAAPDGKVSMNLVTSSLLNEETRR 797
           +NQL +M++V+                    VVS SN+ P+GK++ N+V  SLLNEETRR
Sbjct: 118 VNQLNTMEIVLKDELLTLLLFSLLLDNLETWVVSRSNSTPNGKLTFNMVKDSLLNEETRR 177

Query: 798 ------LSIEKPQALVIETRGRSKSRSTYQH---GXXXXXXXXXXDIECYYCHKKGHIKK 950
                  S    + LV+E+ G+S  R+++++              DI+C+YC+K GH+ K
Sbjct: 178 KGQGMASSSTHNEVLVVESSGKSHQRNSHRYNNRNKLKGKSMTRKDIKCFYCNKMGHLMK 237

Query: 951 YCWSFK--KAQKEGNSSK 998
            C   K  K++ +G   K
Sbjct: 238 ECKFLKRDKSRVKGKDKK 255


>gb|KYP64043.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 336

 Score =  180 bits (457), Expect = 1e-50
 Identities = 100/258 (38%), Positives = 155/258 (60%), Gaps = 12/258 (4%)
 Frame = +3

Query: 261 MVILNGENWLIWKAKMEDYLYCKDLFDAIE-HETKPEKISDEDWSKLNRKAISHIRQWVE 437
           M+ L+  N+ IWK++M+D L+ KD+ D IE + TKP   S+ED  K N+K I  I+Q ++
Sbjct: 1   MIKLDCTNYSIWKSRMKDLLFYKDMNDPIEANGTKP---SEEDRKKTNKKTIDMIKQLID 57

Query: 438 DSIFHHIVNEKEAYKLWRKLEDLYERKTAGNKAFLIRKLVNLKYKEGAKIIEHLNDMKGI 617
            SI+HH+ ++   + LW+KL +L+E K A NKAFLIRKLVNLKY +G  + +HL++ + +
Sbjct: 58  QSIYHHVSSDVNPFNLWKKLSELFESKNAQNKAFLIRKLVNLKYNDGFLMAKHLSNFQNL 117

Query: 618 INQLASMKMVIXXXXXXXXXXXXXXXXXXXXVVSLSNAAPDGKVSMNLVTSSLLNEETRR 797
           +NQL +M++V+                    VVS SN+ P+GK++ N+V  SLLNEETRR
Sbjct: 118 VNQLNTMEIVLKDELLTLLLFSLLLDNLETWVVSRSNSTPNGKLTFNMVKDSLLNEETRR 177

Query: 798 ------LSIEKPQALVIETRGRSKSRSTYQH---GXXXXXXXXXXDIECYYCHKKGHIKK 950
                  S    + LV+E+ G+S  R+++++              DI+C+YC+K GH+ K
Sbjct: 178 KGQGMASSSTHNEVLVVESSGKSHQRNSHRYNNRNKLKGKSMTRKDIKCFYCNKMGHLMK 237

Query: 951 YCWSFK--KAQKEGNSSK 998
            C   K  K++ +G   K
Sbjct: 238 ECKFLKRDKSRVKGKDKK 255


>gb|KYP37153.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 250

 Score =  176 bits (447), Expect = 4e-50
 Identities = 93/213 (43%), Positives = 133/213 (62%), Gaps = 9/213 (4%)
 Frame = +3

Query: 261 MVILNGENWLIWKAKMEDYLYCKDLFDAIEHETKPEKISDEDWSKLNRKAISHIRQWVED 440
           M  L   N+  WK  MED+LYCKDL + I ++ K E  SD  W  LNRKA++ IR++++ 
Sbjct: 1   MFKLTANNYSYWKPMMEDHLYCKDLHEPIIYKEKVEGKSDAQWELLNRKAVAMIRKYIDK 60

Query: 441 SIFHHIVNEKEAYKLWRKLEDLYERKTAGNKAFLIRKLVNLKYKEGAKIIEHLNDMKGII 620
           S+F H+     AY+LW KLE + ++KT  NKA L+R+LV L+YK+G  +IEHLN+ KG++
Sbjct: 61  SLFEHVSTYTNAYELWAKLESMIQKKTPRNKANLVRRLVKLEYKDGHSMIEHLNNFKGLV 120

Query: 621 NQLASMKMVIXXXXXXXXXXXXXXXXXXXXVVSLSNAAPDGKVSMNLVTSSLLNEETRRL 800
           NQL  ++M I                    VV+LSN+AP+GK +M++V+ SLL EE+ R+
Sbjct: 121 NQLTKIEMKIDDELQALLLLSSLPKSWDTLVVTLSNSAPEGKFTMDVVSDSLLGEESMRM 180

Query: 801 SIEK---PQALVI------ETRGRSKSRSTYQH 872
              +   P+A +I      ETRGRSKSR  YQ+
Sbjct: 181 ERGESIHPEANIIENRGKNETRGRSKSRDQYQY 213