BLASTX nr result

ID: Cheilocostus21_contig00027330 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00027330
         (496 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009412009.1| PREDICTED: 5'-3' exoribonuclease 3 [Musa acu...    72   1e-11

>ref|XP_009412009.1| PREDICTED: 5'-3' exoribonuclease 3 [Musa acuminata subsp.
            malaccensis]
          Length = 1109

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 43/79 (54%), Positives = 45/79 (56%)
 Frame = +1

Query: 1    PYPSDNRSASQSVTHRPYEHHQAAYGARNYGGYQDSGTPQRERHYVSGWAPPPRPSQYPA 180
            PYPS NR   Q   H PY H QA Y A NYGGY    T Q E  Y    APP  PSQ+  
Sbjct: 1020 PYPSANRPVPQ---HGPYAHTQAPYNA-NYGGYHSYATQQWEEQYGDERAPP--PSQHTT 1073

Query: 181  GGSYSHQQQQTTNRYAALD 237
            G S+ H  QQTTNRY ALD
Sbjct: 1074 GRSFGH-HQQTTNRYTALD 1091


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