BLASTX nr result

ID: Cheilocostus21_contig00027329 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00027329
         (496 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009412009.1| PREDICTED: 5'-3' exoribonuclease 3 [Musa acu...    84   1e-15
ref|XP_008808991.1| PREDICTED: 5'-3' exoribonuclease 3 isoform X...    57   2e-06
ref|XP_008808990.1| PREDICTED: 5'-3' exoribonuclease 3 isoform X...    57   2e-06
ref|XP_010909409.1| PREDICTED: 5'-3' exoribonuclease 3 isoform X...    55   8e-06
ref|XP_010909408.1| PREDICTED: 5'-3' exoribonuclease 3 isoform X...    55   8e-06

>ref|XP_009412009.1| PREDICTED: 5'-3' exoribonuclease 3 [Musa acuminata subsp.
            malaccensis]
          Length = 1109

 Score = 83.6 bits (205), Expect = 1e-15
 Identities = 46/79 (58%), Positives = 50/79 (63%)
 Frame = +1

Query: 1    PYPSDNRSASQSGTHRPYEHHQAAYGARNYGGYQDYGTQQREQHYVSGRAPPPQPSRYPA 180
            PYPS NR   Q   H PY H QA Y A NYGGY  Y TQQ E+ Y   RAPP  PS++  
Sbjct: 1020 PYPSANRPVPQ---HGPYAHTQAPYNA-NYGGYHSYATQQWEEQYGDERAPP--PSQHTT 1073

Query: 181  GGSYSHHQQQTTNRYAALD 237
            G S+ HH QQTTNRY ALD
Sbjct: 1074 GRSFGHH-QQTTNRYTALD 1091


>ref|XP_008808991.1| PREDICTED: 5'-3' exoribonuclease 3 isoform X2 [Phoenix dactylifera]
          Length = 1072

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/79 (44%), Positives = 42/79 (53%)
 Frame = +1

Query: 1    PYPSDNRSASQSGTHRPYEHHQAAYGARNYGGYQDYGTQQREQHYVSGRAPPPQPSRYPA 180
            PY S NRSA+      PY H  A Y    YGGY +YG QQ +Q +     P P     PA
Sbjct: 982  PYHSVNRSAALPLIPGPYGHPGAVYHG-GYGGYPNYGAQQWDQRHDPRTGPLPS---QPA 1037

Query: 181  GGSYSHHQQQTTNRYAALD 237
             G    H QQ+TNR+AAL+
Sbjct: 1038 VGRGYPHNQQSTNRFAALE 1056


>ref|XP_008808990.1| PREDICTED: 5'-3' exoribonuclease 3 isoform X1 [Phoenix dactylifera]
          Length = 1104

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/79 (44%), Positives = 42/79 (53%)
 Frame = +1

Query: 1    PYPSDNRSASQSGTHRPYEHHQAAYGARNYGGYQDYGTQQREQHYVSGRAPPPQPSRYPA 180
            PY S NRSA+      PY H  A Y    YGGY +YG QQ +Q +     P P     PA
Sbjct: 1014 PYHSVNRSAALPLIPGPYGHPGAVYHG-GYGGYPNYGAQQWDQRHDPRTGPLPS---QPA 1069

Query: 181  GGSYSHHQQQTTNRYAALD 237
             G    H QQ+TNR+AAL+
Sbjct: 1070 VGRGYPHNQQSTNRFAALE 1088


>ref|XP_010909409.1| PREDICTED: 5'-3' exoribonuclease 3 isoform X2 [Elaeis guineensis]
          Length = 1074

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 36/79 (45%), Positives = 41/79 (51%)
 Frame = +1

Query: 1    PYPSDNRSASQSGTHRPYEHHQAAYGARNYGGYQDYGTQQREQHYVSGRAPPPQPSRYPA 180
            PY S NRSA+      PY H  A Y    YGGY +YG +Q EQ     R      S  PA
Sbjct: 984  PYHSVNRSAAPPPIPGPYGHPGAVYHG-GYGGYPNYGAEQWEQRRDPRRG---LLSSQPA 1039

Query: 181  GGSYSHHQQQTTNRYAALD 237
             G    H QQ+TNR+AALD
Sbjct: 1040 VGRGYTHNQQSTNRFAALD 1058


>ref|XP_010909408.1| PREDICTED: 5'-3' exoribonuclease 3 isoform X1 [Elaeis guineensis]
          Length = 1106

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 36/79 (45%), Positives = 41/79 (51%)
 Frame = +1

Query: 1    PYPSDNRSASQSGTHRPYEHHQAAYGARNYGGYQDYGTQQREQHYVSGRAPPPQPSRYPA 180
            PY S NRSA+      PY H  A Y    YGGY +YG +Q EQ     R      S  PA
Sbjct: 1016 PYHSVNRSAAPPPIPGPYGHPGAVYHG-GYGGYPNYGAEQWEQRRDPRRG---LLSSQPA 1071

Query: 181  GGSYSHHQQQTTNRYAALD 237
             G    H QQ+TNR+AALD
Sbjct: 1072 VGRGYTHNQQSTNRFAALD 1090


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