BLASTX nr result

ID: Cheilocostus21_contig00027059 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00027059
         (1007 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009390721.1| PREDICTED: protein NLP3 [Musa acuminata subs...    77   2e-17

>ref|XP_009390721.1| PREDICTED: protein NLP3 [Musa acuminata subsp. malaccensis]
          Length = 966

 Score = 77.0 bits (188), Expect(2) = 2e-17
 Identities = 37/68 (54%), Positives = 51/68 (75%), Gaps = 4/68 (5%)
 Frame = -3

Query: 192  CVKDPNGFIRCTTSNSVLVEPQATGGEVLVADSVSSKDLKI---PTTEGCH-EDLFPLPA 25
            C + PN F+ C+TS+++L+EPQAT G +L+ DS S+KDL I   PT EGCH ED+ P+PA
Sbjct: 801  CARVPNAFVLCSTSDAILMEPQATIGGILIGDSGSAKDLNIICAPTREGCHDEDVAPVPA 860

Query: 24   QPMQTPDL 1
            +P+Q  DL
Sbjct: 861  KPVQMQDL 868



 Score = 41.2 bits (95), Expect(2) = 2e-17
 Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
 Frame = -1

Query: 317 TNTP-SEGSCQEGPANDANESNQIVSSSFMDAAIKFSSDSSNNVSRI 180
           T+TP SEGSC   P ND +E NQIVSS+ ++A  K S D++   +R+
Sbjct: 759 TSTPASEGSCHGSPINDTHECNQIVSSN-LEAGTKPSLDATKPCARV 804


Top