BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00026652
         (1986 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]                   544   e-171
gb|AHG32726.1| ORF3, partial [Dioscorea rotundata]                    501   e-167
gb|ANK58548.1| polyprotein [Fig badnavirus 1]                         532   e-167
gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration...   531   e-167
ref|YP_006273075.1| polyprotein [Fig badnavirus 1] >gi|333493962...   532   e-167
gb|ANK58539.1| polyprotein [Fig badnavirus 1]                         531   e-166
gb|AKA45798.1| polyprotein [Taro bacilliform CH virus]                531   e-166
ref|YP_009130664.1| polyprotein [Taro bacilliform CH virus] >gi|...   530   e-166
gb|ANK58542.1| polyprotein [Fig badnavirus 1]                         530   e-166
gb|ANK58545.1| polyprotein [Fig badnavirus 1]                         527   e-165
gb|ASA40123.1| ORF3 [Dioscorea bacilliform virus]                     528   e-165
ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discolor...   525   e-164
gb|ANK58536.1| polyprotein [Fig badnavirus 1]                         523   e-163
gb|PKU61844.1| RNA-directed DNA polymerase [Dendrobium catenatum]     486   e-162
gb|AAW30012.1| polyprotein, partial [Citrus yellow mosaic virus]      475   e-161
gb|ACH86211.1| unknown [Citrus yellow mosaic virus]                   508   e-160
gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]               515   e-160
ref|NP_569153.1| unknown [Citrus yellow mosaic virus] >gi|164169...   514   e-159
gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus]               513   e-159
gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]               512   e-159

>gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]
          Length = 1846

 Score =  544 bits (1402), Expect = e-171
 Identities = 259/379 (68%), Positives = 312/379 (82%)
 Frame = -1

Query: 1890 KKVRNMLYNLRVNLEIENVPEFSVNAILDTGASTCCIDETSIPLLALEENPFLVHFSGIS 1711
            K VRNMLYN  ++++I  + +FSV AILDTGA+TCCID+ SIP  ALEEN +LV FSG++
Sbjct: 1057 KMVRNMLYNFIISIDIPGIDKFSVKAILDTGATTCCIDQESIPKEALEENTYLVRFSGVN 1116

Query: 1710 SKATSHKKLKQGKMMIGENTFRIPYTYSFPLKLGDNIQMILGCNFIRSMKGGLRIEGNIV 1531
            S  T++KKLK G+M IGEN FRIPYTYSFP+K+ D +QMI+GCNFIR+M GG+RIEGN+V
Sbjct: 1117 STMTANKKLKGGRMFIGENMFRIPYTYSFPIKMEDGVQMIVGCNFIRAMYGGVRIEGNVV 1176

Query: 1530 TFYKNVTTIETAQYVPSASAIXXXXXXXXEYIRIKELVYYSAGVPQQKFLSRIESLLTEL 1351
            TFYKN+T I T+Q    A  +         + +I+E VY + G  ++ FL R E+L+ +L
Sbjct: 1177 TFYKNLTVINTSQSTEIARMLQEDVDDEELW-QIQEAVYINIGKSRESFLKRFEALINQL 1235

Query: 1350 KNQGFIGENPQMHWIKNQILCHLDIKNPDLTIEDKPLKHLTPQNKESFTKHVQALLKIGV 1171
            K  G+IGENP  HW KN+++C LDIKNPD  IEDKPLKHLTP  KESF +H +ALLK+GV
Sbjct: 1236 KEAGYIGENPLQHWEKNRVVCQLDIKNPDFIIEDKPLKHLTPSMKESFRRHTEALLKLGV 1295

Query: 1170 IRPSQSRHRTTAIIVNSGTTVNPETGKETKGKERMVFNFKRLNDNTHKDQYSLPGINTIL 991
            IRPS+SRHRTTA+IV SGT V+P TGKET+GKERMVFN+KRLND T+KDQYSLPGI+TI+
Sbjct: 1296 IRPSKSRHRTTAMIVQSGTAVDPVTGKETRGKERMVFNYKRLNDLTNKDQYSLPGISTIM 1355

Query: 990  *KIGNSKIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLFEWLVMPFSLKNAPAIFQRKM 811
             K+GNS+I+SKFDLKSGFHQVAMHPDSIEWTAFWVPDGL+EWLVMPF LKNAPA+FQRKM
Sbjct: 1356 KKVGNSRIYSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLYEWLVMPFGLKNAPAVFQRKM 1415

Query: 810  DICFKGTEDFIVVYIDDIL 754
            D CFKGTEDFI VYIDDIL
Sbjct: 1416 DHCFKGTEDFIAVYIDDIL 1434


>gb|AHG32726.1| ORF3, partial [Dioscorea rotundata]
          Length = 579

 Score =  501 bits (1289), Expect = e-167
 Identities = 248/379 (65%), Positives = 293/379 (77%)
 Frame = -1

Query: 1890 KKVRNMLYNLRVNLEIENVPEFSVNAILDTGASTCCIDETSIPLLALEENPFLVHFSGIS 1711
            K+ RN LYNL V L+I     F VNAILDTGA+TCCI+E  +P   LE++ F V F+G +
Sbjct: 9    KERRNGLYNLTVELDIPGAVPFKVNAILDTGATTCCINEEGLPKEILEDSTFEVKFTGAN 68

Query: 1710 SKATSHKKLKQGKMMIGENTFRIPYTYSFPLKLGDNIQMILGCNFIRSMKGGLRIEGNIV 1531
            S  T+ KKLK G M IG++ FRIPYT++FPLKLG   Q+ILGCNFIRSM GG+RIEG+ V
Sbjct: 69   SVMTARKKLKYGNMRIGDHHFRIPYTFAFPLKLGGGEQLILGCNFIRSMNGGVRIEGDEV 128

Query: 1530 TFYKNVTTIETAQYVPSASAIXXXXXXXXEYIRIKELVYYSAGVPQQKFLSRIESLLTEL 1351
            TFYKNVTTI+T Q VP   A+        EYI ++E       V    F  +   L+ EL
Sbjct: 129  TFYKNVTTIKTQQEVPKVLALEELEMEEEEYIAMQESCSAICPVVNINFTQKFGDLIQEL 188

Query: 1350 KNQGFIGENPQMHWIKNQILCHLDIKNPDLTIEDKPLKHLTPQNKESFTKHVQALLKIGV 1171
            KN G+IGE P   W +N++ C LDI NPDLTI+DKPLKH+TP  +E+F KH+QALLK+ V
Sbjct: 189  KNAGYIGEEPMKFWAQNKVTCKLDIINPDLTIQDKPLKHVTPSMEEAFRKHIQALLKLKV 248

Query: 1170 IRPSQSRHRTTAIIVNSGTTVNPETGKETKGKERMVFNFKRLNDNTHKDQYSLPGINTIL 991
            IRPS S+HRTTA IV+SGTTV+P+TG ETKGKERMVFN+KRLNDNT KDQYSLPGINTIL
Sbjct: 249  IRPSTSKHRTTAFIVHSGTTVDPKTGVETKGKERMVFNYKRLNDNTEKDQYSLPGINTIL 308

Query: 990  *KIGNSKIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLFEWLVMPFSLKNAPAIFQRKM 811
             +IG S I+SKFDLKSGFHQVAM P+SI+WTAFWVPDGL+EWLVMPF LKNAPA+FQRKM
Sbjct: 309  KRIGQSVIYSKFDLKSGFHQVAMDPESIQWTAFWVPDGLYEWLVMPFGLKNAPAVFQRKM 368

Query: 810  DICFKGTEDFIVVYIDDIL 754
            D CF+GTEDFI VYIDDIL
Sbjct: 369  DNCFRGTEDFIAVYIDDIL 387


>gb|ANK58548.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  532 bits (1371), Expect = e-167
 Identities = 268/406 (66%), Positives = 316/406 (77%), Gaps = 1/406 (0%)
 Frame = -1

Query: 1968 EEIFYLLAKTDDEEHQQIFSVDINEAKK-VRNMLYNLRVNLEIENVPEFSVNAILDTGAS 1792
            EE+ YL       E ++I +    E KK V+NMLYN  +  EI +V  F V AILDTGAS
Sbjct: 1041 EEVNYL------GEDEKILAAGTEEKKKFVKNMLYNFDIEFEIPDVSRFRVRAILDTGAS 1094

Query: 1791 TCCIDETSIPLLALEENPFLVHFSGISSKATSHKKLKQGKMMIGENTFRIPYTYSFPLKL 1612
            TCCI+E ++P  ALEE+P+ V  +G++S   + KKLK G+MMIG NTFRIP+TYS PL +
Sbjct: 1095 TCCINEGAVPKEALEESPYEVQLNGVNSVQKTKKKLKYGRMMIGMNTFRIPFTYSLPLVI 1154

Query: 1611 GDNIQMILGCNFIRSMKGGLRIEGNIVTFYKNVTTIETAQYVPSASAIXXXXXXXXEYIR 1432
            GDNIQMI+GCNFIR+M GG+RIEGN VTFYKN+T I T+  V   S          EY++
Sbjct: 1155 GDNIQMIVGCNFIRAMYGGVRIEGNEVTFYKNLTRISTSPEVSVNSL--DEEVCEEEYLQ 1212

Query: 1431 IKELVYYSAGVPQQKFLSRIESLLTELKNQGFIGENPQMHWIKNQILCHLDIKNPDLTIE 1252
            ++E+V  + G  ++ FL +   LL ELK  GFIGENP  HW KN ILC LDIKNPD  IE
Sbjct: 1213 VQEMVICNIGESRESFLKKFRPLLEELKEAGFIGENPLQHWKKNGILCQLDIKNPDFIIE 1272

Query: 1251 DKPLKHLTPQNKESFTKHVQALLKIGVIRPSQSRHRTTAIIVNSGTTVNPETGKETKGKE 1072
            D+PLK+LTPQ KESF KH++ LL +GVIR S+SRHRTTA++VNSGTTV+P+TGKE K KE
Sbjct: 1273 DRPLKNLTPQMKESFKKHIKVLLDLGVIRASKSRHRTTAMLVNSGTTVDPKTGKEIKRKE 1332

Query: 1071 RMVFNFKRLNDNTHKDQYSLPGINTIL*KIGNSKIFSKFDLKSGFHQVAMHPDSIEWTAF 892
            RMVFN+KRLND THKDQYSLPGINTIL K+GNSKIFSKFDLKSGFHQVAMHPDSIEWTAF
Sbjct: 1333 RMVFNYKRLNDITHKDQYSLPGINTILKKVGNSKIFSKFDLKSGFHQVAMHPDSIEWTAF 1392

Query: 891  WVPDGLFEWLVMPFSLKNAPAIFQRKMDICFKGTEDFIVVYIDDIL 754
            WVPDGL+EWLVMPF LKNAP++FQRKMD CFKGTEDFI VYIDDIL
Sbjct: 1393 WVPDGLYEWLVMPFGLKNAPSVFQRKMDECFKGTEDFIAVYIDDIL 1438


>gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
          Length = 1789

 Score =  531 bits (1368), Expect = e-167
 Identities = 262/407 (64%), Positives = 322/407 (79%), Gaps = 1/407 (0%)
 Frame = -1

Query: 1971 TEEIFYLLAKTDDEEHQQIFSVDINEAKK-VRNMLYNLRVNLEIENVPEFSVNAILDTGA 1795
            TE+I YL       E+++       E K+ V+NMLYN  +  EI +VP+F V AILDTGA
Sbjct: 1055 TEDINYL------GENEKALIAGAEERKRLVKNMLYNFDIEFEIPDVPKFKVRAILDTGA 1108

Query: 1794 STCCIDETSIPLLALEENPFLVHFSGISSKATSHKKLKQGKMMIGENTFRIPYTYSFPLK 1615
            STCC++E ++P  A+E++P+ V  +G++S   + KKLK G+MMIG N+FRIP+TYS PL 
Sbjct: 1109 STCCVNEGAVPKEAIEDSPYEVQLNGVNSVQKTKKKLKYGRMMIGMNSFRIPFTYSLPLV 1168

Query: 1614 LGDNIQMILGCNFIRSMKGGLRIEGNIVTFYKNVTTIETAQYVPSASAIXXXXXXXXEYI 1435
            +GDNIQMI+GCNFIR+M GG+RIEGN VTFYKN+T I T+  V + +++        EY+
Sbjct: 1169 IGDNIQMIVGCNFIRAMYGGVRIEGNEVTFYKNLTRISTSPEV-TVNSLEEEEVCEEEYL 1227

Query: 1434 RIKELVYYSAGVPQQKFLSRIESLLTELKNQGFIGENPQMHWIKNQILCHLDIKNPDLTI 1255
            +++E+V  + G  ++ FL R + L+ ELK  G+IGENP  HW KN +LC LDIKNPD  I
Sbjct: 1228 QVQEMVICNIGESRESFLKRFKPLIEELKEAGYIGENPLQHWSKNGVLCQLDIKNPDFII 1287

Query: 1254 EDKPLKHLTPQNKESFTKHVQALLKIGVIRPSQSRHRTTAIIVNSGTTVNPETGKETKGK 1075
            ED+PLK +TPQ KESF KHV+ALL + VIRPS+SRHRTTA++VNSGTTV+P+TGKETKGK
Sbjct: 1288 EDRPLKSVTPQMKESFKKHVKALLDLRVIRPSKSRHRTTAMLVNSGTTVDPKTGKETKGK 1347

Query: 1074 ERMVFNFKRLNDNTHKDQYSLPGINTIL*KIGNSKIFSKFDLKSGFHQVAMHPDSIEWTA 895
            ERMVFN+KRLND THKDQYSLPGINTIL +IGNSKIFSKFDLKSGFHQVAMHPDSIEWTA
Sbjct: 1348 ERMVFNYKRLNDITHKDQYSLPGINTILKRIGNSKIFSKFDLKSGFHQVAMHPDSIEWTA 1407

Query: 894  FWVPDGLFEWLVMPFSLKNAPAIFQRKMDICFKGTEDFIVVYIDDIL 754
            FWVPDGL+EWLVMPF LKNAP+IFQRKM  CF GTE+FI VYIDDIL
Sbjct: 1408 FWVPDGLYEWLVMPFGLKNAPSIFQRKMGECFNGTEEFIAVYIDDIL 1454


>ref|YP_006273075.1| polyprotein [Fig badnavirus 1]
 gb|AEF56561.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  532 bits (1370), Expect = e-167
 Identities = 268/406 (66%), Positives = 316/406 (77%), Gaps = 1/406 (0%)
 Frame = -1

Query: 1968 EEIFYLLAKTDDEEHQQIFSVDINEAKK-VRNMLYNLRVNLEIENVPEFSVNAILDTGAS 1792
            EE+ YL       E ++I +    E KK V+NMLYN  +  EI +V  F V AILDTGAS
Sbjct: 1041 EEVNYL------GEDEKILAAGTEEKKKFVKNMLYNFDIEFEIPDVSRFRVRAILDTGAS 1094

Query: 1791 TCCIDETSIPLLALEENPFLVHFSGISSKATSHKKLKQGKMMIGENTFRIPYTYSFPLKL 1612
            TCCI+E ++P  ALEE+P+ V  +G++S   + KKLK G+MMIG NTFRIP+TYS PL +
Sbjct: 1095 TCCINEGAVPKEALEESPYEVQLNGVNSVQKTKKKLKYGRMMIGMNTFRIPFTYSLPLVI 1154

Query: 1611 GDNIQMILGCNFIRSMKGGLRIEGNIVTFYKNVTTIETAQYVPSASAIXXXXXXXXEYIR 1432
            GDNIQMI+GCNFIR+M GG+RIEGN VTFYKN+T I T+  V   S          EY++
Sbjct: 1155 GDNIQMIVGCNFIRAMYGGVRIEGNEVTFYKNLTRISTSPEVSVNSL--DEEVCEEEYLQ 1212

Query: 1431 IKELVYYSAGVPQQKFLSRIESLLTELKNQGFIGENPQMHWIKNQILCHLDIKNPDLTIE 1252
            ++E+V  + G  ++ FL +   LL ELK  GFIGENP  HW KN ILC LDIKNPD  IE
Sbjct: 1213 VQEMVICNIGESRKSFLKKFRPLLEELKEAGFIGENPLQHWKKNGILCQLDIKNPDFIIE 1272

Query: 1251 DKPLKHLTPQNKESFTKHVQALLKIGVIRPSQSRHRTTAIIVNSGTTVNPETGKETKGKE 1072
            D+PLK+LTPQ KESF KH++ LL +GVIR S+SRHRTTA++VNSGTTV+P+TGKE K KE
Sbjct: 1273 DRPLKNLTPQMKESFKKHIKVLLDLGVIRASKSRHRTTAMLVNSGTTVDPKTGKEIKRKE 1332

Query: 1071 RMVFNFKRLNDNTHKDQYSLPGINTIL*KIGNSKIFSKFDLKSGFHQVAMHPDSIEWTAF 892
            RMVFN+KRLND THKDQYSLPGINTIL K+GNSKIFSKFDLKSGFHQVAMHPDSIEWTAF
Sbjct: 1333 RMVFNYKRLNDITHKDQYSLPGINTILKKVGNSKIFSKFDLKSGFHQVAMHPDSIEWTAF 1392

Query: 891  WVPDGLFEWLVMPFSLKNAPAIFQRKMDICFKGTEDFIVVYIDDIL 754
            WVPDGL+EWLVMPF LKNAP++FQRKMD CFKGTEDFI VYIDDIL
Sbjct: 1393 WVPDGLYEWLVMPFGLKNAPSVFQRKMDECFKGTEDFIAVYIDDIL 1438


>gb|ANK58539.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  531 bits (1369), Expect = e-166
 Identities = 268/406 (66%), Positives = 316/406 (77%), Gaps = 1/406 (0%)
 Frame = -1

Query: 1968 EEIFYLLAKTDDEEHQQIFSVDINEAKK-VRNMLYNLRVNLEIENVPEFSVNAILDTGAS 1792
            EE+ YL       E ++I +    E KK V+NMLYN  +  EI +V  F V AILDTGAS
Sbjct: 1041 EEVNYL------GEDEKILAAGTEEKKKFVKNMLYNFDIESEIPDVSRFRVRAILDTGAS 1094

Query: 1791 TCCIDETSIPLLALEENPFLVHFSGISSKATSHKKLKQGKMMIGENTFRIPYTYSFPLKL 1612
            TCCI+E ++P  ALEE+P+ V  +G++S   + KKLK G+MMIG NTFRIP+TYS PL +
Sbjct: 1095 TCCINEGAVPKEALEESPYEVQLNGVNSVQKTKKKLKYGRMMIGMNTFRIPFTYSLPLVI 1154

Query: 1611 GDNIQMILGCNFIRSMKGGLRIEGNIVTFYKNVTTIETAQYVPSASAIXXXXXXXXEYIR 1432
            GDNIQMI+GCNFIR+M GG+RIEGN VTFYKN+T I T+  V   S          EY++
Sbjct: 1155 GDNIQMIVGCNFIRAMYGGVRIEGNEVTFYKNLTRISTSPEVSVNSL--DEEVCEEEYLQ 1212

Query: 1431 IKELVYYSAGVPQQKFLSRIESLLTELKNQGFIGENPQMHWIKNQILCHLDIKNPDLTIE 1252
            ++E+V  + G  ++ FL +   LL ELK  GFIGENP  HW KN ILC LDIKNPD  IE
Sbjct: 1213 VQEMVICNIGESRESFLKKFRPLLEELKEAGFIGENPLQHWKKNGILCQLDIKNPDFIIE 1272

Query: 1251 DKPLKHLTPQNKESFTKHVQALLKIGVIRPSQSRHRTTAIIVNSGTTVNPETGKETKGKE 1072
            D+PLK+LT Q KESF KH++ LL +GVIR S+SRHRTTA++VNSGTTV+P+TGKE KGKE
Sbjct: 1273 DRPLKNLTSQMKESFKKHIKVLLDLGVIRASKSRHRTTAMLVNSGTTVDPKTGKEIKGKE 1332

Query: 1071 RMVFNFKRLNDNTHKDQYSLPGINTIL*KIGNSKIFSKFDLKSGFHQVAMHPDSIEWTAF 892
            RMVFN+KRLND THKDQYSLPGINTIL K+GNSKIFSKFDLKSGFHQVAMHPDSIEWTAF
Sbjct: 1333 RMVFNYKRLNDITHKDQYSLPGINTILKKVGNSKIFSKFDLKSGFHQVAMHPDSIEWTAF 1392

Query: 891  WVPDGLFEWLVMPFSLKNAPAIFQRKMDICFKGTEDFIVVYIDDIL 754
            WVPDGL+EWLVMPF LKNAP++FQRKMD CFKGTEDFI VYIDDIL
Sbjct: 1393 WVPDGLYEWLVMPFGLKNAPSVFQRKMDECFKGTEDFIAVYIDDIL 1438


>gb|AKA45798.1| polyprotein [Taro bacilliform CH virus]
          Length = 1803

 Score =  531 bits (1367), Expect = e-166
 Identities = 257/395 (65%), Positives = 316/395 (80%), Gaps = 3/395 (0%)
 Frame = -1

Query: 1929 EHQQIFSVDINEA---KKVRNMLYNLRVNLEIENVPEFSVNAILDTGASTCCIDETSIPL 1759
            E Q+I S++ NE    KK +NMLYNL + + I +V  FSV+AILDTGASTCCI+  +IP 
Sbjct: 1067 ETQKILSIEKNELSPPKKTKNMLYNLILEINIPDVANFSVHAILDTGASTCCINAEAIPE 1126

Query: 1758 LALEENPFLVHFSGISSKATSHKKLKQGKMMIGENTFRIPYTYSFPLKLGDNIQMILGCN 1579
             A+EE PF+ +FSGI+SK +++KKL+ GKM+IG+N FRIPYTY FP++LGD+IQMILGCN
Sbjct: 1127 NAVEEIPFMANFSGINSKVSTNKKLRYGKMIIGDNAFRIPYTYVFPMQLGDDIQMILGCN 1186

Query: 1578 FIRSMKGGLRIEGNIVTFYKNVTTIETAQYVPSASAIXXXXXXXXEYIRIKELVYYSAGV 1399
            FIRSM+GG+RIEG+ V FYKNVT I+T Q VP  +AI        EYI I  +  Y    
Sbjct: 1187 FIRSMQGGVRIEGDTVAFYKNVTQIQTQQTVPIIAAIEELELEEEEYISIAAICAYGGME 1246

Query: 1398 PQQKFLSRIESLLTELKNQGFIGENPQMHWIKNQILCHLDIKNPDLTIEDKPLKHLTPQN 1219
                F    + L+ ELK+ G+IG++P  +W  N+I C L+IKNPDLTIED+PLKH++PQ 
Sbjct: 1247 ISSPFQFSYQKLIQELKDMGYIGDDPMKYWSSNKITCQLEIKNPDLTIEDRPLKHISPQM 1306

Query: 1218 KESFTKHVQALLKIGVIRPSQSRHRTTAIIVNSGTTVNPETGKETKGKERMVFNFKRLND 1039
            + S+ +H +A+LK+G IRPS+S+HRTTAIIVNSGTT++P TGKE +GKERMVFN+KRLND
Sbjct: 1307 EASYRRHTEAVLKLGTIRPSKSKHRTTAIIVNSGTTIDPITGKEVRGKERMVFNYKRLND 1366

Query: 1038 NTHKDQYSLPGINTIL*KIGNSKIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLFEWLV 859
            NTHKDQYSLPGINTI+ K+GNSKI+SKFDLKSGFHQVAMHP SIEWTAFWVP GL+EWL 
Sbjct: 1367 NTHKDQYSLPGINTIIQKVGNSKIYSKFDLKSGFHQVAMHPYSIEWTAFWVPQGLYEWLA 1426

Query: 858  MPFSLKNAPAIFQRKMDICFKGTEDFIVVYIDDIL 754
            MPF LKNAPA+FQRKMD CFKGTE+FI VYIDDIL
Sbjct: 1427 MPFGLKNAPAVFQRKMDNCFKGTENFIAVYIDDIL 1461


>ref|YP_009130664.1| polyprotein [Taro bacilliform CH virus]
 gb|AKA45804.1| polyprotein [Taro bacilliform CH virus]
          Length = 1803

 Score =  530 bits (1365), Expect = e-166
 Identities = 257/395 (65%), Positives = 316/395 (80%), Gaps = 3/395 (0%)
 Frame = -1

Query: 1929 EHQQIFSVDINEA---KKVRNMLYNLRVNLEIENVPEFSVNAILDTGASTCCIDETSIPL 1759
            E Q+I S++ NE    KK +NMLYNL + + I +V  FSV+AILDTGASTCCI+  +IP 
Sbjct: 1067 ETQRILSIEKNELSPPKKTKNMLYNLILEINIPDVANFSVHAILDTGASTCCINAGAIPE 1126

Query: 1758 LALEENPFLVHFSGISSKATSHKKLKQGKMMIGENTFRIPYTYSFPLKLGDNIQMILGCN 1579
             A+EE+PF+   SGI+SK +++KKL+ GKM+IG+N FRIPYTY FP++LGD+IQMILGCN
Sbjct: 1127 NAVEESPFMASSSGINSKVSTNKKLRYGKMIIGDNAFRIPYTYVFPMQLGDDIQMILGCN 1186

Query: 1578 FIRSMKGGLRIEGNIVTFYKNVTTIETAQYVPSASAIXXXXXXXXEYIRIKELVYYSAGV 1399
            FIRSM+GG+RIEG+ VTFYKNVT I+T Q VP  +AI        EYI I  +  Y    
Sbjct: 1187 FIRSMQGGVRIEGDTVTFYKNVTQIQTQQTVPIIAAIEELELEEEEYISIATICAYGGME 1246

Query: 1398 PQQKFLSRIESLLTELKNQGFIGENPQMHWIKNQILCHLDIKNPDLTIEDKPLKHLTPQN 1219
                F    + L+ ELK+ G+IG++P  +W  N+I C L+IKNPDLTIED+PLKH++PQ 
Sbjct: 1247 ISSPFQFSYQKLIQELKDMGYIGDDPMKYWSSNKITCQLEIKNPDLTIEDRPLKHISPQM 1306

Query: 1218 KESFTKHVQALLKIGVIRPSQSRHRTTAIIVNSGTTVNPETGKETKGKERMVFNFKRLND 1039
            + S+ +H +A+LK+G IRPS+S+HRTTAIIVNSGTT++P TGKE +GKERMVFN+KRLND
Sbjct: 1307 EASYRRHTEAVLKLGTIRPSKSKHRTTAIIVNSGTTIDPITGKEVRGKERMVFNYKRLND 1366

Query: 1038 NTHKDQYSLPGINTIL*KIGNSKIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLFEWLV 859
            NTHKDQYSLPGINTI+ K+GNSKI+SKFDLKSGFHQVAMHP SIEWTAFWVP GL+EWL 
Sbjct: 1367 NTHKDQYSLPGINTIIQKVGNSKIYSKFDLKSGFHQVAMHPYSIEWTAFWVPQGLYEWLA 1426

Query: 858  MPFSLKNAPAIFQRKMDICFKGTEDFIVVYIDDIL 754
            MPF LKNAPA+FQRKMD CFKGTE+FI VYIDDIL
Sbjct: 1427 MPFGLKNAPAVFQRKMDNCFKGTENFIAVYIDDIL 1461


>gb|ANK58542.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  530 bits (1365), Expect = e-166
 Identities = 267/406 (65%), Positives = 315/406 (77%), Gaps = 1/406 (0%)
 Frame = -1

Query: 1968 EEIFYLLAKTDDEEHQQIFSVDINEAKK-VRNMLYNLRVNLEIENVPEFSVNAILDTGAS 1792
            EE+ YL       E ++I +    E KK V+NMLYN  +  EI +V  F V AILDTGAS
Sbjct: 1041 EEVNYL------GEDEKILAAGTEEKKKFVKNMLYNFDIEFEIPDVSRFRVRAILDTGAS 1094

Query: 1791 TCCIDETSIPLLALEENPFLVHFSGISSKATSHKKLKQGKMMIGENTFRIPYTYSFPLKL 1612
            TCCI+E ++P  ALEE+P+ V  +G++S   + KKLK G+MMIG NTFRIP+TYS PL +
Sbjct: 1095 TCCINEGAVPKEALEESPYEVQLNGVNSVQKTKKKLKYGRMMIGMNTFRIPFTYSLPLVI 1154

Query: 1611 GDNIQMILGCNFIRSMKGGLRIEGNIVTFYKNVTTIETAQYVPSASAIXXXXXXXXEYIR 1432
            GDNIQMI+GCNFIR+M GG+RIEGN VTFYKN+T I T+  V   S          EY++
Sbjct: 1155 GDNIQMIVGCNFIRAMYGGVRIEGNEVTFYKNLTRISTSPEVSVNSL--DEEVCEEEYLQ 1212

Query: 1431 IKELVYYSAGVPQQKFLSRIESLLTELKNQGFIGENPQMHWIKNQILCHLDIKNPDLTIE 1252
            ++E+V  + G  ++ FL +   LL ELK  GFIGENP  HW KN ILC LDIKNPD  IE
Sbjct: 1213 VQEMVICNIGESRESFLKKFRPLLEELKEAGFIGENPLQHWKKNGILCQLDIKNPDFIIE 1272

Query: 1251 DKPLKHLTPQNKESFTKHVQALLKIGVIRPSQSRHRTTAIIVNSGTTVNPETGKETKGKE 1072
            D+PLK+LT Q KESF KH++ LL +GVIR S+SRHRTTA++VNSGTTV+P+TGKE KGKE
Sbjct: 1273 DRPLKNLTSQMKESFKKHIKVLLDLGVIRASKSRHRTTAMLVNSGTTVDPKTGKEIKGKE 1332

Query: 1071 RMVFNFKRLNDNTHKDQYSLPGINTIL*KIGNSKIFSKFDLKSGFHQVAMHPDSIEWTAF 892
            RMVFN+KRLND THKDQYSLPGINTIL K+GNS IFSKFDLKSGFHQVAMHPDSIEWTAF
Sbjct: 1333 RMVFNYKRLNDITHKDQYSLPGINTILKKVGNSTIFSKFDLKSGFHQVAMHPDSIEWTAF 1392

Query: 891  WVPDGLFEWLVMPFSLKNAPAIFQRKMDICFKGTEDFIVVYIDDIL 754
            WVPDGL+EWLVMPF LKNAP++FQRKMD CFKGTEDFI VYIDDIL
Sbjct: 1393 WVPDGLYEWLVMPFGLKNAPSVFQRKMDECFKGTEDFIAVYIDDIL 1438


>gb|ANK58545.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  527 bits (1357), Expect = e-165
 Identities = 266/406 (65%), Positives = 315/406 (77%), Gaps = 1/406 (0%)
 Frame = -1

Query: 1968 EEIFYLLAKTDDEEHQQIFSVDINEAKK-VRNMLYNLRVNLEIENVPEFSVNAILDTGAS 1792
            EE+ YL       E ++I +    E KK V+NMLYN  +  EI +V  F V AILDTGAS
Sbjct: 1041 EEVNYL------GEDEKILAAGTEEKKKFVKNMLYNSDIESEIPDVSRFRVRAILDTGAS 1094

Query: 1791 TCCIDETSIPLLALEENPFLVHFSGISSKATSHKKLKQGKMMIGENTFRIPYTYSFPLKL 1612
            TCCI+E ++P  ALEE+P+ V  +G++S   + KKLK G+MMIG NTFRIP+TYS PL +
Sbjct: 1095 TCCINEGAVPKEALEESPYEVQLNGVNSVQKTKKKLKYGRMMIGMNTFRIPFTYSLPLVI 1154

Query: 1611 GDNIQMILGCNFIRSMKGGLRIEGNIVTFYKNVTTIETAQYVPSASAIXXXXXXXXEYIR 1432
            GDNIQMI+GCNFIR+M GG+RIEGN VTFYKN+T I T+  V   S          EY++
Sbjct: 1155 GDNIQMIVGCNFIRAMYGGVRIEGNEVTFYKNLTRISTSPEVSVNSL--DEEVCEEEYLQ 1212

Query: 1431 IKELVYYSAGVPQQKFLSRIESLLTELKNQGFIGENPQMHWIKNQILCHLDIKNPDLTIE 1252
            ++E+V  + G  ++ FL +   LL ELK  GFIGENP  HW KN ILC LDIKNPD  IE
Sbjct: 1213 VQEMVICNIGESRESFLKKFRPLLEELKEAGFIGENPLQHWKKNGILCQLDIKNPDFIIE 1272

Query: 1251 DKPLKHLTPQNKESFTKHVQALLKIGVIRPSQSRHRTTAIIVNSGTTVNPETGKETKGKE 1072
            D+PLK+LTPQ KESF KH++ LL +GVIR S+SRHRTTA++VNSGTTV+P+TGKE K +E
Sbjct: 1273 DRPLKNLTPQMKESFKKHIKVLLDLGVIRASKSRHRTTAMLVNSGTTVDPKTGKEIKREE 1332

Query: 1071 RMVFNFKRLNDNTHKDQYSLPGINTIL*KIGNSKIFSKFDLKSGFHQVAMHPDSIEWTAF 892
            RMVFN+KRLND THKDQYSLPGINTIL K+GNS IFSKFDLKSGFHQVAMHPDSIEWTAF
Sbjct: 1333 RMVFNYKRLNDITHKDQYSLPGINTILKKVGNSTIFSKFDLKSGFHQVAMHPDSIEWTAF 1392

Query: 891  WVPDGLFEWLVMPFSLKNAPAIFQRKMDICFKGTEDFIVVYIDDIL 754
            WVPDGL+EWLVMPF LKNAP++FQRKMD CFKGTEDFI VYIDDIL
Sbjct: 1393 WVPDGLYEWLVMPFGLKNAPSVFQRKMDECFKGTEDFIAVYIDDIL 1438


>gb|ASA40123.1| ORF3 [Dioscorea bacilliform virus]
          Length = 1946

 Score =  528 bits (1361), Expect = e-165
 Identities = 262/395 (66%), Positives = 315/395 (79%), Gaps = 1/395 (0%)
 Frame = -1

Query: 1935 DEEHQQIFSVDIN-EAKKVRNMLYNLRVNLEIENVPEFSVNAILDTGASTCCIDETSIPL 1759
            +EEH++IFS +   + ++  N LYNL V   I N+P F V AILDTGA+TCC DE +IP 
Sbjct: 1242 EEEHEKIFSAEAAVQPRRNGNKLYNLNVEFNIPNIPPFRVRAILDTGATTCCADEKAIPN 1301

Query: 1758 LALEENPFLVHFSGISSKATSHKKLKQGKMMIGENTFRIPYTYSFPLKLGDNIQMILGCN 1579
             ALEE+P+ V F+G++S + S+KK+K G M IGE+ FRIP+TY FPLKL D+IQMI+GCN
Sbjct: 1302 DALEESPYRVRFTGVNSTSHSNKKMKAGVMKIGEHFFRIPFTYIFPLKL-DDIQMIIGCN 1360

Query: 1578 FIRSMKGGLRIEGNIVTFYKNVTTIETAQYVPSASAIXXXXXXXXEYIRIKELVYYSAGV 1399
            FIR+M GG+RIEGN VTFYKNVTTI+T  Y  +A++I        E+I + +    +   
Sbjct: 1361 FIRAMAGGIRIEGNEVTFYKNVTTIKTLPYASAAASIEELDLEEEEFISLTQAAEPTV-T 1419

Query: 1398 PQQKFLSRIESLLTELKNQGFIGENPQMHWIKNQILCHLDIKNPDLTIEDKPLKHLTPQN 1219
              ++F  RIE  +  LK QGFIGE P  HW+KN++ C LDI NPDLTIED+PLKH+TPQ 
Sbjct: 1420 NNKEFCQRIEPTIKALKEQGFIGEEPMKHWVKNKVTCKLDIINPDLTIEDRPLKHVTPQM 1479

Query: 1218 KESFTKHVQALLKIGVIRPSQSRHRTTAIIVNSGTTVNPETGKETKGKERMVFNFKRLND 1039
            +E+F KHVQALLK+ VIRPSQSRHRTTAIIV SGTTV+P+TGKE KGKERMVFN+KRLND
Sbjct: 1480 QEAFKKHVQALLKLKVIRPSQSRHRTTAIIVYSGTTVDPKTGKEVKGKERMVFNYKRLND 1539

Query: 1038 NTHKDQYSLPGINTIL*KIGNSKIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLFEWLV 859
            NT+KDQYSLPGINTI+ ++G SKI+SKFDLKSGFHQVAM PDSIEWTAFWVP+GLFEWLV
Sbjct: 1540 NTNKDQYSLPGINTIIQRVGQSKIYSKFDLKSGFHQVAMDPDSIEWTAFWVPEGLFEWLV 1599

Query: 858  MPFSLKNAPAIFQRKMDICFKGTEDFIVVYIDDIL 754
            MPF LKNAPA+FQRKMD CFKGTE FI VYIDDIL
Sbjct: 1600 MPFGLKNAPAVFQRKMDNCFKGTEKFIAVYIDDIL 1634


>ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
 emb|CDN68224.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
          Length = 1830

 Score =  525 bits (1351), Expect = e-164
 Identities = 254/393 (64%), Positives = 315/393 (80%), Gaps = 1/393 (0%)
 Frame = -1

Query: 1929 EHQQIFSVDINEAKK-VRNMLYNLRVNLEIENVPEFSVNAILDTGASTCCIDETSIPLLA 1753
            E++++      E K+ V+NMLYN  +  EI +VP+F V AILDTGASTCC++E ++P  A
Sbjct: 1027 ENEKVLIAGAEERKRLVKNMLYNFDIEFEIPDVPKFKVRAILDTGASTCCVNEGAVPKEA 1086

Query: 1752 LEENPFLVHFSGISSKATSHKKLKQGKMMIGENTFRIPYTYSFPLKLGDNIQMILGCNFI 1573
            +E++P+ V  +G++S   + KKLK G+MMIG N+FRIP+TYS PL +GDNIQMI+GCNFI
Sbjct: 1087 IEDSPYEVQLNGVNSVQKTKKKLKYGRMMIGMNSFRIPFTYSLPLVIGDNIQMIVGCNFI 1146

Query: 1572 RSMKGGLRIEGNIVTFYKNVTTIETAQYVPSASAIXXXXXXXXEYIRIKELVYYSAGVPQ 1393
            R+M GG+RIEGN VTFYKN+T I T+  V  +  +        EY++I+++V  + G  +
Sbjct: 1147 RAMYGGVRIEGNEVTFYKNLTKISTSPEV--SVNVLEEEVCEEEYLQIQDMVVCNIGESR 1204

Query: 1392 QKFLSRIESLLTELKNQGFIGENPQMHWIKNQILCHLDIKNPDLTIEDKPLKHLTPQNKE 1213
            + FL + + L+ E +  G+IGENP  HW KN +LC LDIKNPD  IED+PLK +TPQ KE
Sbjct: 1205 ESFLKKFKPLIEEFQEAGYIGENPLQHWEKNGVLCQLDIKNPDFIIEDRPLKSVTPQMKE 1264

Query: 1212 SFTKHVQALLKIGVIRPSQSRHRTTAIIVNSGTTVNPETGKETKGKERMVFNFKRLNDNT 1033
            SF +HV+ALL + VIRPS+SRHRTTA++VNSGTTV+P+TGKETKGKERMVFN+KRLND T
Sbjct: 1265 SFKRHVKALLDLKVIRPSKSRHRTTAMLVNSGTTVDPKTGKETKGKERMVFNYKRLNDIT 1324

Query: 1032 HKDQYSLPGINTIL*KIGNSKIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLFEWLVMP 853
            HKDQYSLPGINTIL +IGNSKIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGL+EWLVMP
Sbjct: 1325 HKDQYSLPGINTILKRIGNSKIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLYEWLVMP 1384

Query: 852  FSLKNAPAIFQRKMDICFKGTEDFIVVYIDDIL 754
            F LKNAP+IFQRKMD CF GTE+FI VYIDDIL
Sbjct: 1385 FGLKNAPSIFQRKMDECFNGTEEFIAVYIDDIL 1417


>gb|ANK58536.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  523 bits (1348), Expect = e-163
 Identities = 266/406 (65%), Positives = 314/406 (77%), Gaps = 1/406 (0%)
 Frame = -1

Query: 1968 EEIFYLLAKTDDEEHQQIFSVDINEAKK-VRNMLYNLRVNLEIENVPEFSVNAILDTGAS 1792
            EE+ YL       E ++I +    E KK V+NMLYN  +  EI +V  F V AILDTGAS
Sbjct: 1041 EEVNYL------GEDEKILAAGTEEKKKFVKNMLYNSDIESEIPDVSRFRVRAILDTGAS 1094

Query: 1791 TCCIDETSIPLLALEENPFLVHFSGISSKATSHKKLKQGKMMIGENTFRIPYTYSFPLKL 1612
            TCCI+E ++P  ALEE+P+ V  +G++S   + KKLK G+MMIG NTFRIP+TYS PL +
Sbjct: 1095 TCCINEGAVPKEALEESPYEVQLNGVNSVQKTKKKLKYGRMMIGMNTFRIPFTYSLPLVI 1154

Query: 1611 GDNIQMILGCNFIRSMKGGLRIEGNIVTFYKNVTTIETAQYVPSASAIXXXXXXXXEYIR 1432
            GDNIQMI+GCNFIR+M GG+RIEGN VTFYKN+T I T+  V   S          EY++
Sbjct: 1155 GDNIQMIVGCNFIRAMYGGVRIEGNEVTFYKNLTRISTSPEVSVNSL--DEEVCEEEYLQ 1212

Query: 1431 IKELVYYSAGVPQQKFLSRIESLLTELKNQGFIGENPQMHWIKNQILCHLDIKNPDLTIE 1252
            ++E+V  + G  ++ FL +   LL ELK  GFIGENP  HW KN ILC LDIKNPD  IE
Sbjct: 1213 VQEMVICNIGESRESFLKKFRPLLEELKEAGFIGENPLQHWKKNGILCQLDIKNPDFIIE 1272

Query: 1251 DKPLKHLTPQNKESFTKHVQALLKIGVIRPSQSRHRTTAIIVNSGTTVNPETGKETKGKE 1072
            D+PLK+LTPQ KESF KH++ LL +GVIR S+SRHRTTA++VNSGTTV+P+TGKE K KE
Sbjct: 1273 DRPLKNLTPQMKESFKKHIKVLLDLGVIRASKSRHRTTAMLVNSGTTVDPKTGKEIKRKE 1332

Query: 1071 RMVFNFKRLNDNTHKDQYSLPGINTIL*KIGNSKIFSKFDLKSGFHQVAMHPDSIEWTAF 892
            RMVFN+KRLND THKDQYSLPGINTIL K+GNS IFSKFDLKSGFHQVAMHPDSIEWTAF
Sbjct: 1333 RMVFNYKRLNDITHKDQYSLPGINTILKKVGNSTIFSKFDLKSGFHQVAMHPDSIEWTAF 1392

Query: 891  WVPDGLFEWLVMPFSLKNAPAIFQRKMDICFKGTEDFIVVYIDDIL 754
            WVPDGL+E LVMPF LKNAP++FQRKMD CFKGTEDFI VYIDDIL
Sbjct: 1393 WVPDGLYEGLVMPFGLKNAPSVFQRKMDECFKGTEDFIAVYIDDIL 1438


>gb|PKU61844.1| RNA-directed DNA polymerase [Dendrobium catenatum]
          Length = 531

 Score =  486 bits (1250), Expect = e-162
 Identities = 238/395 (60%), Positives = 299/395 (75%), Gaps = 2/395 (0%)
 Frame = -1

Query: 1932 EEHQQIFSVDINEAKKVRNMLYNLRVNLEIENVPEFSVNAILDTGASTCCIDETSIPLLA 1753
            E  Q++ + +    +   N L  L V  +I  V  F V AILDTGA+TCCID++ IP  A
Sbjct: 44   ETSQKVAATEDTTKRVTANRLLRLTVEFDIPGVKTFKVLAILDTGATTCCIDQSVIPQDA 103

Query: 1752 LEENPFLVHFSGISSKATSHKKLKQGKMMIGENTFRIPYTYSFPLKLGDNIQMILGCNFI 1573
            LE NPFLVHF G++S+ T+ KKLK G+M+IG+  FRIPYTY+FP+K+G++IQM++GCNFI
Sbjct: 104  LEPNPFLVHFKGVNSETTADKKLKGGRMVIGDQQFRIPYTYAFPMKIGEDIQMLIGCNFI 163

Query: 1572 RSMKGGLRIEGNIVTFYKNVTTIETAQYVPSASAIXXXXXXXXEYIRIKELVYYSAGVPQ 1393
            R+M GG+RIEG+ VTFYKNVTTI         + I        EY   +E+   SA   Q
Sbjct: 164  RAMHGGVRIEGDEVTFYKNVTTIH--------ANITSSCIEDEEYGMAQEIERMSAHEIQ 215

Query: 1392 --QKFLSRIESLLTELKNQGFIGENPQMHWIKNQILCHLDIKNPDLTIEDKPLKHLTPQN 1219
                F  + E L+ +L+  G+IG+NP  HW+ N++ C LDIKNPD+TIED+PLK +TPQ 
Sbjct: 216  IPAPFKRQFEGLIKQLQAAGYIGDNPIKHWLANKVTCQLDIKNPDITIEDRPLKRVTPQM 275

Query: 1218 KESFTKHVQALLKIGVIRPSQSRHRTTAIIVNSGTTVNPETGKETKGKERMVFNFKRLND 1039
            +ESF +H++ALL + VIRP QS+HRTTA + +SGTT+NP TGKE +GKERMVFN+KRLND
Sbjct: 276  QESFQRHIKALLDLKVIRPCQSKHRTTAFLASSGTTINPVTGKEERGKERMVFNYKRLND 335

Query: 1038 NTHKDQYSLPGINTIL*KIGNSKIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLFEWLV 859
            NTHKDQYSLPGINTI+ KIGN  ++SKFDLKSGFHQVAMHP+SI WTAF VP+GL+EWLV
Sbjct: 336  NTHKDQYSLPGINTIINKIGNCSVYSKFDLKSGFHQVAMHPNSIPWTAFLVPNGLYEWLV 395

Query: 858  MPFSLKNAPAIFQRKMDICFKGTEDFIVVYIDDIL 754
            MPF LKNAPA+FQR+MD CFKGTE+FI VYIDDIL
Sbjct: 396  MPFGLKNAPAVFQRRMDYCFKGTENFIAVYIDDIL 430


>gb|AAW30012.1| polyprotein, partial [Citrus yellow mosaic virus]
          Length = 357

 Score =  475 bits (1223), Expect = e-161
 Identities = 235/356 (66%), Positives = 277/356 (77%), Gaps = 3/356 (0%)
 Frame = -1

Query: 1812 ILDTGASTCCIDETSIPLLALEENPFLVHFSGISSKATSHKKLKQGKMMIGENTFRIPYT 1633
            ILDTGA+TCCID  S+P  ALEEN F+V+FSGI+SK    +KLK GKM I E+ FRIPY 
Sbjct: 1    ILDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKLKAGKMFINEHYFRIPYC 60

Query: 1632 YSFPLKLGDNIQMILGCNFIRSMKGGLRIEGNIVTFYKNVTTIETAQYVP---SASAIXX 1462
            YSF +++GD IQ+ILGCNFIRSM GG+R+EGN VTFYK +T+I T    P          
Sbjct: 61   YSFEMQIGDGIQLILGCNFIRSMYGGVRLEGNTVTFYKQITSINTRLAAPLLKQEKEEKE 120

Query: 1461 XXXXXXEYIRIKELVYYSAGVPQQKFLSRIESLLTELKNQGFIGENPQMHWIKNQILCHL 1282
                  E+  I+E+V YS   P   F  +   L+ ELK QG+IGE P  +W KN+++CHL
Sbjct: 121  EEFNLDEHRLIQEMVAYSTERPFVHFQQKFAGLIQELKAQGYIGEEPMKYWAKNKVVCHL 180

Query: 1281 DIKNPDLTIEDKPLKHLTPQNKESFTKHVQALLKIGVIRPSQSRHRTTAIIVNSGTTVNP 1102
            DIKN D+ IED+PLKH+TPQ +ESF KHV+ALLKIG IRPS+SRHRTTAI+V+SGT+++P
Sbjct: 181  DIKNSDMVIEDRPLKHVTPQMEESFRKHVEALLKIGAIRPSKSRHRTTAIMVSSGTSIDP 240

Query: 1101 ETGKETKGKERMVFNFKRLNDNTHKDQYSLPGINTIL*KIGNSKIFSKFDLKSGFHQVAM 922
             TGKE KGKERMVFN+KRLND T+KDQYSLPGI TIL ++  S IFSKFDLKSGFHQVAM
Sbjct: 241  ITGKEVKGKERMVFNYKRLNDLTNKDQYSLPGIQTILQRLKGSTIFSKFDLKSGFHQVAM 300

Query: 921  HPDSIEWTAFWVPDGLFEWLVMPFSLKNAPAIFQRKMDICFKGTEDFIVVYIDDIL 754
            HPDSIEWTAFWVP GL+EWLVMP  LKNAPA+FQRKMD CFKGTE FI VYIDDIL
Sbjct: 301  HPDSIEWTAFWVPSGLYEWLVMPLGLKNAPAVFQRKMDHCFKGTEAFIAVYIDDIL 356


>gb|ACH86211.1| unknown [Citrus yellow mosaic virus]
          Length = 1490

 Score =  508 bits (1308), Expect = e-160
 Identities = 247/385 (64%), Positives = 299/385 (77%), Gaps = 2/385 (0%)
 Frame = -1

Query: 1902 INEAKKVRNMLYNLRVNLEIENVPEFSVNAILDTGASTCCIDETSIPLLALEENPFLVHF 1723
            + + + V+NMLYN+ V +EI  +P F+V AILDTGA+TCCID  S+P  ALEEN F+V+F
Sbjct: 686  VTKTRPVKNMLYNMDVRMEIPGIPAFTVKAILDTGATTCCIDSRSVPKDALEENSFVVNF 745

Query: 1722 SGISSKATSHKKLKQGKMMIGENTFRIPYTYSFPLKLGDNIQMILGCNFIRSMKGGLRIE 1543
            SGI+SK    +K+K GKM I E+ FRIPY YSF +++GD IQ+ILGCNFIRSM GG+R+E
Sbjct: 746  SGINSKQQVKQKIKAGKMFINEHYFRIPYCYSFEMQIGDGIQLILGCNFIRSMYGGVRLE 805

Query: 1542 GNIVTFYKNVTTIETAQYVP--SASAIXXXXXXXXEYIRIKELVYYSAGVPQQKFLSRIE 1369
            GN +TFYK +T+I T    P               E+  I+E+V YS   P   F  +  
Sbjct: 806  GNTITFYKQITSINTRLAAPLIQQDEEKEEELNLEEHRLIQEMVAYSTERPFVHFQQKFA 865

Query: 1368 SLLTELKNQGFIGENPQMHWIKNQILCHLDIKNPDLTIEDKPLKHLTPQNKESFTKHVQA 1189
             L+ ELK QG+IGE P  +W KN+++CHLDIKNPD+ IED+PLKH+TPQ +ESF +HV+A
Sbjct: 866  GLIQELKAQGYIGEEPMKYWAKNRVVCHLDIKNPDMVIEDRPLKHVTPQMEESFRRHVEA 925

Query: 1188 LLKIGVIRPSQSRHRTTAIIVNSGTTVNPETGKETKGKERMVFNFKRLNDNTHKDQYSLP 1009
            LLKIG IRPS+SRHRTTAIIVNSGT+++P TGKE KGKERMVFN+KRLND T+KDQYSLP
Sbjct: 926  LLKIGAIRPSKSRHRTTAIIVNSGTSIDPITGKEVKGKERMVFNYKRLNDLTNKDQYSLP 985

Query: 1008 GINTIL*KIGNSKIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLFEWLVMPFSLKNAPA 829
            GI TIL ++  S IFSKFDLKSGF QVAMHPDS+EWTAFWVP GL+EWLVMPF LKNAPA
Sbjct: 986  GIQTILQRLKGSTIFSKFDLKSGFQQVAMHPDSVEWTAFWVPSGLYEWLVMPFGLKNAPA 1045

Query: 828  IFQRKMDICFKGTEDFIVVYIDDIL 754
            +FQRKMD CFKGTE FI VYIDDIL
Sbjct: 1046 VFQRKMDHCFKGTEAFIAVYIDDIL 1070


>gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1968

 Score =  515 bits (1326), Expect = e-160
 Identities = 251/386 (65%), Positives = 301/386 (77%), Gaps = 3/386 (0%)
 Frame = -1

Query: 1902 INEAKKVRNMLYNLRVNLEIENVPEFSVNAILDTGASTCCIDETSIPLLALEENPFLVHF 1723
            + + + VRNMLYN+ V +EI  +P F+V AILDTGA+TCCID  S+P  ALEEN F+V+F
Sbjct: 1163 VTKTRPVRNMLYNMDVRMEIPGIPAFTVKAILDTGATTCCIDSRSVPKDALEENSFVVNF 1222

Query: 1722 SGISSKATSHKKLKQGKMMIGENTFRIPYTYSFPLKLGDNIQMILGCNFIRSMKGGLRIE 1543
            SGI+SK    +KLK GKM I E+ FRIPY YSF +++GD IQ+ILGCNFIRSM GG+R+E
Sbjct: 1223 SGINSKQQVKQKLKAGKMFINEHYFRIPYCYSFEMQIGDGIQLILGCNFIRSMYGGVRLE 1282

Query: 1542 GNIVTFYKNVTTIETAQYVP---SASAIXXXXXXXXEYIRIKELVYYSAGVPQQKFLSRI 1372
            GN +TFYK +T+I T    P                E+  I+E+V YS   P  +F  + 
Sbjct: 1283 GNTITFYKQITSINTRLAAPLLKQEEEEKEEELNLEEHRLIQEMVAYSTERPFVQFQQKF 1342

Query: 1371 ESLLTELKNQGFIGENPQMHWIKNQILCHLDIKNPDLTIEDKPLKHLTPQNKESFTKHVQ 1192
              L+ +LK QG+IGE P  +W KNQ++CHLDIKNPD+ IED+PLKH+TPQ +ESF KHV+
Sbjct: 1343 AGLIQDLKAQGYIGEEPMKYWAKNQVVCHLDIKNPDMVIEDRPLKHVTPQMEESFRKHVE 1402

Query: 1191 ALLKIGVIRPSQSRHRTTAIIVNSGTTVNPETGKETKGKERMVFNFKRLNDNTHKDQYSL 1012
            ALLKIG IRPS+SRHRTTAIIVNSGT+++P TGKE KGKERMVFN+KRLND T+KDQYSL
Sbjct: 1403 ALLKIGAIRPSKSRHRTTAIIVNSGTSIDPITGKEVKGKERMVFNYKRLNDLTNKDQYSL 1462

Query: 1011 PGINTIL*KIGNSKIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLFEWLVMPFSLKNAP 832
            PGI TIL ++  S IFSKFDLKSGFHQVAMHPDS+EWTAFWVP GL+EWLVMPF LKNAP
Sbjct: 1463 PGIQTILQRLKGSTIFSKFDLKSGFHQVAMHPDSVEWTAFWVPSGLYEWLVMPFGLKNAP 1522

Query: 831  AIFQRKMDICFKGTEDFIVVYIDDIL 754
            A+FQRKMD CFKGTE FI VYIDDIL
Sbjct: 1523 AVFQRKMDHCFKGTEAFIAVYIDDIL 1548


>ref|NP_569153.1| unknown [Citrus yellow mosaic virus]
 gb|AAL18495.1|AF347695_3 unknown [Citrus yellow mosaic virus]
          Length = 1983

 Score =  514 bits (1325), Expect = e-159
 Identities = 252/386 (65%), Positives = 301/386 (77%), Gaps = 3/386 (0%)
 Frame = -1

Query: 1902 INEAKKVRNMLYNLRVNLEIENVPEFSVNAILDTGASTCCIDETSIPLLALEENPFLVHF 1723
            + + + V+NMLYN+ V +EI  +P F+V AILDTGA+TCCID  S+P  ALEEN F+V+F
Sbjct: 1178 VTKTRPVKNMLYNMDVRMEIPGIPAFTVKAILDTGATTCCIDSRSVPKDALEENSFVVNF 1237

Query: 1722 SGISSKATSHKKLKQGKMMIGENTFRIPYTYSFPLKLGDNIQMILGCNFIRSMKGGLRIE 1543
            SGI+SK    +KLK GKM I E+ FRIPY YSF +++GD IQ+ILGCNFIRSM GG+R+E
Sbjct: 1238 SGINSKQQVKQKLKTGKMFINEHYFRIPYCYSFEMQIGDGIQLILGCNFIRSMYGGVRLE 1297

Query: 1542 GNIVTFYKNVTTIETAQYVP---SASAIXXXXXXXXEYIRIKELVYYSAGVPQQKFLSRI 1372
            GN +TFYK +T+I T    P                E+  I+E+V YS   P  +F  + 
Sbjct: 1298 GNTITFYKQITSINTRLAAPLLKQEEEEKEEELNLEEHRLIQEMVAYSTERPFVQFQQKF 1357

Query: 1371 ESLLTELKNQGFIGENPQMHWIKNQILCHLDIKNPDLTIEDKPLKHLTPQNKESFTKHVQ 1192
              L+ +LK QG+IGE P  +W KNQ++CHLDIKNPD+ IED+PLKH+TPQ +ESF KHV+
Sbjct: 1358 AGLIQDLKAQGYIGEEPMKYWAKNQVVCHLDIKNPDMVIEDRPLKHVTPQMEESFRKHVE 1417

Query: 1191 ALLKIGVIRPSQSRHRTTAIIVNSGTTVNPETGKETKGKERMVFNFKRLNDNTHKDQYSL 1012
            ALLKIG IRPS+SRHRTTAIIVNSGT+++P TGKE KGKERMVFN+KRLND T+KDQYSL
Sbjct: 1418 ALLKIGAIRPSKSRHRTTAIIVNSGTSIDPITGKEVKGKERMVFNYKRLNDLTNKDQYSL 1477

Query: 1011 PGINTIL*KIGNSKIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLFEWLVMPFSLKNAP 832
            PGI TIL ++  S IFSKFDLKSGFHQVAMHPDSIEWTAFWVP GL+EWLVMPF LKNAP
Sbjct: 1478 PGIQTILQRLKGSTIFSKFDLKSGFHQVAMHPDSIEWTAFWVPSGLYEWLVMPFGLKNAP 1537

Query: 831  AIFQRKMDICFKGTEDFIVVYIDDIL 754
            AIFQRKMD CFKGTE FI VYIDDIL
Sbjct: 1538 AIFQRKMDHCFKGTEAFIAVYIDDIL 1563


>gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1979

 Score =  513 bits (1321), Expect = e-159
 Identities = 251/386 (65%), Positives = 301/386 (77%), Gaps = 3/386 (0%)
 Frame = -1

Query: 1902 INEAKKVRNMLYNLRVNLEIENVPEFSVNAILDTGASTCCIDETSIPLLALEENPFLVHF 1723
            + + + V+NMLYN+ V +EI  +P F+V AILDTGA+TCCID  S+P  ALEEN F+V+F
Sbjct: 1172 VTKTRPVKNMLYNMDVRMEIPGIPAFTVKAILDTGATTCCIDSRSVPKDALEENSFVVNF 1231

Query: 1722 SGISSKATSHKKLKQGKMMIGENTFRIPYTYSFPLKLGDNIQMILGCNFIRSMKGGLRIE 1543
            SGI+SK    +K+K GKM I E+ FRIPY YSF +++GD IQ+ILGCNFIRSM GG+R+E
Sbjct: 1232 SGINSKQQVKQKIKPGKMFISEHYFRIPYCYSFEMQIGDGIQLILGCNFIRSMYGGVRLE 1291

Query: 1542 GNIVTFYKNVTTIET---AQYVPSASAIXXXXXXXXEYIRIKELVYYSAGVPQQKFLSRI 1372
            GN +TFYK +T+I T   A ++              E+  I+E+V YS   P   F  + 
Sbjct: 1292 GNTITFYKQITSINTRLAAPHLQQEEEGKEEELNLEEHRLIQEMVAYSTERPFVHFQQKF 1351

Query: 1371 ESLLTELKNQGFIGENPQMHWIKNQILCHLDIKNPDLTIEDKPLKHLTPQNKESFTKHVQ 1192
              L+ ELK QG+IGE P  +W KNQ++CHLDIKNPD+ IED+PLKH+TPQ +ESF KHV+
Sbjct: 1352 AGLIQELKAQGYIGEEPMKYWAKNQVVCHLDIKNPDMVIEDRPLKHVTPQMEESFRKHVE 1411

Query: 1191 ALLKIGVIRPSQSRHRTTAIIVNSGTTVNPETGKETKGKERMVFNFKRLNDNTHKDQYSL 1012
            ALLKIG IRPS+SRHRTTAIIVNSGT++NP TGKE KGKERMVF +KRLND T+KDQYSL
Sbjct: 1412 ALLKIGAIRPSKSRHRTTAIIVNSGTSINPLTGKEVKGKERMVFIYKRLNDLTNKDQYSL 1471

Query: 1011 PGINTIL*KIGNSKIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLFEWLVMPFSLKNAP 832
            PGI TIL ++  S IFSKFDLKSGFHQVAMHPDSIEWTAFWVP GL+EWLVMPF LKNAP
Sbjct: 1472 PGIQTILQRLKGSTIFSKFDLKSGFHQVAMHPDSIEWTAFWVPSGLYEWLVMPFGLKNAP 1531

Query: 831  AIFQRKMDICFKGTEDFIVVYIDDIL 754
            A+FQRKMD CFKGTE FI VYIDDIL
Sbjct: 1532 AVFQRKMDHCFKGTEAFIAVYIDDIL 1557


>gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1967

 Score =  512 bits (1319), Expect = e-159
 Identities = 251/386 (65%), Positives = 300/386 (77%), Gaps = 3/386 (0%)
 Frame = -1

Query: 1902 INEAKKVRNMLYNLRVNLEIENVPEFSVNAILDTGASTCCIDETSIPLLALEENPFLVHF 1723
            + + + V+NMLYN+ V +EI  +P F+V AILDTGA+TCCID  S+P  ALEEN F+V+F
Sbjct: 1162 VTKTRPVKNMLYNMDVRMEIPGIPAFTVKAILDTGATTCCIDSRSVPKDALEENSFVVNF 1221

Query: 1722 SGISSKATSHKKLKQGKMMIGENTFRIPYTYSFPLKLGDNIQMILGCNFIRSMKGGLRIE 1543
            SGI+SK    +K+K GKM I E+ FRIPY YSF +++GD IQ+ILGCNFIRSM GG+R+E
Sbjct: 1222 SGINSKQQVKQKIKAGKMFINEHYFRIPYCYSFEMQIGDGIQLILGCNFIRSMYGGVRLE 1281

Query: 1542 GNIVTFYKNVTTIETAQYVP---SASAIXXXXXXXXEYIRIKELVYYSAGVPQQKFLSRI 1372
            GN VTFYK +T+I T    P                E+  I+E+V YS   P   F  + 
Sbjct: 1282 GNTVTFYKQITSINTRLAAPLLKQDEEEKEEELNLDEHRLIQEMVAYSTERPFVHFQQKF 1341

Query: 1371 ESLLTELKNQGFIGENPQMHWIKNQILCHLDIKNPDLTIEDKPLKHLTPQNKESFTKHVQ 1192
              L+ ELK QG+IGE P  +W KN+++CHLDIKNPD+ IED+PLKH+TPQ +ESF KHV+
Sbjct: 1342 AGLIQELKAQGYIGEEPMKYWAKNKVVCHLDIKNPDMVIEDRPLKHVTPQMEESFRKHVE 1401

Query: 1191 ALLKIGVIRPSQSRHRTTAIIVNSGTTVNPETGKETKGKERMVFNFKRLNDNTHKDQYSL 1012
            ALLKIG IRPS+SRHRTTAIIVNSGT+++P TGKE KGKERMVFN+KRLND T+KDQYSL
Sbjct: 1402 ALLKIGAIRPSKSRHRTTAIIVNSGTSIDPITGKEVKGKERMVFNYKRLNDLTNKDQYSL 1461

Query: 1011 PGINTIL*KIGNSKIFSKFDLKSGFHQVAMHPDSIEWTAFWVPDGLFEWLVMPFSLKNAP 832
            PGI TIL ++  S IFSKFDLKSGFHQVAMHPDSIEWTAFWVP GL+EWLVMPF LKNAP
Sbjct: 1462 PGIQTILQRLKGSTIFSKFDLKSGFHQVAMHPDSIEWTAFWVPSGLYEWLVMPFGLKNAP 1521

Query: 831  AIFQRKMDICFKGTEDFIVVYIDDIL 754
            A+FQRKMD CFKGTE FI VYIDDIL
Sbjct: 1522 AVFQRKMDHCFKGTEAFIAVYIDDIL 1547