BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00026110
         (2693 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009407776.1| PREDICTED: rRNA biogenesis protein RRP5 [Mus...   996   0.0  
ref|XP_008789163.1| PREDICTED: rRNA biogenesis protein RRP5 [Pho...   870   0.0  
ref|XP_023900321.1| rRNA biogenesis protein RRP5 [Quercus suber]      803   0.0  
gb|POE50885.1| rrna biogenesis protein rrp5 [Quercus suber]           803   0.0  
gb|KJB33049.1| hypothetical protein B456_006G145100 [Gossypium r...   787   0.0  
ref|XP_012485661.1| PREDICTED: protein RRP5 homolog isoform X3 [...   787   0.0  
ref|XP_012485660.1| PREDICTED: protein RRP5 homolog isoform X2 [...   787   0.0  
ref|XP_016671447.1| PREDICTED: rRNA biogenesis protein RRP5-like...   786   0.0  
gb|KJB33048.1| hypothetical protein B456_006G145100 [Gossypium r...   787   0.0  
gb|KJB33045.1| hypothetical protein B456_006G145100 [Gossypium r...   787   0.0  
ref|XP_012485659.1| PREDICTED: protein RRP5 homolog isoform X1 [...   787   0.0  
ref|XP_016671446.1| PREDICTED: rRNA biogenesis protein RRP5-like...   786   0.0  
gb|KHF99545.1| Protein RRP5 [Gossypium arboreum]                      784   0.0  
ref|XP_017610800.1| PREDICTED: rRNA biogenesis protein RRP5 [Gos...   784   0.0  
ref|XP_016669405.1| PREDICTED: rRNA biogenesis protein RRP5-like...   780   0.0  
ref|XP_016669404.1| PREDICTED: rRNA biogenesis protein RRP5-like...   780   0.0  
ref|XP_016669401.1| PREDICTED: rRNA biogenesis protein RRP5-like...   780   0.0  
ref|XP_024037232.1| LOW QUALITY PROTEIN: rRNA biogenesis protein...   780   0.0  
gb|ESR43192.1| hypothetical protein CICLE_v10013867mg [Citrus cl...   780   0.0  
ref|XP_010087548.1| rRNA biogenesis protein RRP5 isoform X1 [Mor...   773   0.0  

>ref|XP_009407776.1| PREDICTED: rRNA biogenesis protein RRP5 [Musa acuminata subsp.
            malaccensis]
          Length = 1920

 Score =  996 bits (2576), Expect = 0.0
 Identities = 515/790 (65%), Positives = 594/790 (75%), Gaps = 15/790 (1%)
 Frame = +3

Query: 3    LSIKPSILSGSEEILTSCASEPLTFSXXXXXXXXXXXXXSEWVWLSVSRSVMAHMYILDS 182
            LSI+PS+++GSEE +T+C SE L FS             SEW+WLSVS SV+AH+YILDS
Sbjct: 1134 LSIRPSLMAGSEEAVTTCVSEELNFSVGENVRGYVVKVDSEWLWLSVSPSVVAHLYILDS 1193

Query: 183  SCDPDELEKFQQRYVVGQAVKGRILNINAEKKLLRLTSY---------------SSSMHA 317
            SC+P EL+KFQQ Y VGQAVKGRIL+IN EKKLLRL S                +S++  
Sbjct: 1194 SCEPHELQKFQQCYSVGQAVKGRILSINKEKKLLRLASCPSVDETGDKASQKIGASTVSD 1253

Query: 318  DQQFSQGDIVAGRIKKIFAGVGGLLVQIGPHLCGRVHYTEVVDEWVPYPLRGYQEGQFVK 497
             QQFS GDIV GRIKKI   VGGLLVQIGPHL GRVHYTE+VDEWVP+P+  YQEGQFVK
Sbjct: 1254 GQQFSSGDIVGGRIKKILPSVGGLLVQIGPHLFGRVHYTELVDEWVPHPISKYQEGQFVK 1313

Query: 498  CKILDISHSSEGILHIDLSLRAXXXXXXXXXXXXXXXRRYEKVDDLQPSMNVQGYVKNIS 677
            CKIL+IS SSEGILH+DLSLR                +R+EK+DDL P MN+QGYVKNI+
Sbjct: 1314 CKILEISRSSEGILHVDLSLRVSVITNELVSCS----KRFEKIDDLHPDMNIQGYVKNIT 1369

Query: 678  TKGCFILLSRVLDARILISNLSDGYIDDPEKEFPVGKLVHAKLLSVEASSKRVEATLRTG 857
            +KGCFI LSR++DARIL+SNLS  YID PEKEFPVGKLVHAK+LSVE  S RVEATL+TG
Sbjct: 1370 SKGCFISLSRMMDARILVSNLSYAYIDSPEKEFPVGKLVHAKVLSVEPLSNRVEATLKTG 1429

Query: 858  SEADNAKSSQASFKNLYVGDIITGQIRRIETYGLFITIDKANVVGLCHTSELSDDHIDNL 1037
            ++A+  KS   +  NL+VGDI+TG IRRIE+YGLFIT+DKANVVGLCH SELSD+HIDN+
Sbjct: 1430 NKAETIKSIADTIVNLHVGDIVTGHIRRIESYGLFITLDKANVVGLCHISELSDEHIDNI 1489

Query: 1038 EANYKTGDKVLAKILKIDNERMRVSLGMKKSYVDDAGSVEQNCXXXXXXXXXXXXXXGAS 1217
            EA+Y TG+KV++KILKID ER R+SLGMKKSY+++A  V+Q+                  
Sbjct: 1490 EASYATGEKVVSKILKIDEERQRISLGMKKSYIENASGVDQSHAINGSHDHDESDSASMD 1549

Query: 1218 SLDDTFLDLQHKDDLTKCKMMYNSDIGGSEILVQPGRTTCVLPLQXXXXXXXXXXXXNPV 1397
            ++D+  L+L H DDL K + M   D  GSEIL   GR+  VLPLQ            NPV
Sbjct: 1550 NMDNELLNLLHNDDLIKHQKMLGHDNAGSEILTPSGRSASVLPLQVSLEDSDGSDLDNPV 1609

Query: 1398 SANQDDAKVSEQXXXXXXXXXXXXXXXXXXXXXXXXXRHLQNDMPRTEDEFEKLVRRSPN 1577
             A QD A  ++Q                         R LQNDMPRTEDEFEKLVR SPN
Sbjct: 1610 IAGQDGANENKQAAKRDRCIKKKAKDEKELEIIAAEERRLQNDMPRTEDEFEKLVRSSPN 1669

Query: 1578 SSFVWIKYMAYMLSLADVEKARSTAERALRTINIREEAEKLNIWVAYFNLENEYGSPPEE 1757
            SSFVWIKYMAYMLSLA+VEKAR+ AERALRTINI EE EKLNIWVAYFNLENE+GSPPEE
Sbjct: 1670 SSFVWIKYMAYMLSLAEVEKARNIAERALRTININEEGEKLNIWVAYFNLENEHGSPPEE 1729

Query: 1758 AVKKLFQRALQYCDPKKLHLALLGVYERTEQYNLVDELTERMTKKFKHSCKVWLRCIQNF 1937
            AVKK+FQRALQY DPKKLHLALLGVYER+EQ NL +EL ERMTKKFKHSCKVW+ CIQ+F
Sbjct: 1730 AVKKIFQRALQYSDPKKLHLALLGVYERSEQQNLAEELLERMTKKFKHSCKVWMHCIQSF 1789

Query: 1938 LKKNKDGIQSIINRALLSLPHKKHIKFISQTALLEFKIGSAERGRSMFESILREYPKRTD 2117
            LKK++DGIQSI+NRA++SLP KKHIKFISQTALLEFK G  +RGRSM ESILREYPKRTD
Sbjct: 1790 LKKDEDGIQSIVNRAVISLPRKKHIKFISQTALLEFKSGVPDRGRSMLESILREYPKRTD 1849

Query: 2118 LWSIYLDREIRLGDAEVIRALFERATCLGXXXXXXXXXXXXYLDYEKAHGNEDTIEHVKR 2297
            LWSIYLD+EIRLGDAEVIRALFERATCL             YLDYEK HG+EDT+EHVKR
Sbjct: 1850 LWSIYLDQEIRLGDAEVIRALFERATCLSLPPKKMKFLFKKYLDYEKVHGDEDTVEHVKR 1909

Query: 2298 KAMEYVENTL 2327
            KA+EYVE++L
Sbjct: 1910 KALEYVESSL 1919


>ref|XP_008789163.1| PREDICTED: rRNA biogenesis protein RRP5 [Phoenix dactylifera]
          Length = 1922

 Score =  870 bits (2249), Expect = 0.0
 Identities = 461/805 (57%), Positives = 554/805 (68%), Gaps = 30/805 (3%)
 Frame = +3

Query: 3    LSIKPSILSGSEEILTSCASEPLTFSXXXXXXXXXXXXXSEWVWLSVSRSVMAHMYILDS 182
            LS++PS+L+G    + +  +E   FS              EWVWL+VSR VMAH++ LDS
Sbjct: 1130 LSVRPSLLTGESTKIPT--AEEFNFSVGSIVKGYVVKVDGEWVWLTVSRYVMAHIFFLDS 1187

Query: 183  SCDPDELEKFQQRYVVGQAVKGRILNINAEKKLLRLTSYSSSMHAD-------------- 320
            SC+P EL++FQQRY VGQAVKG+I++ N EKKLLRLTS  SS  ++              
Sbjct: 1188 SCEPGELQEFQQRYSVGQAVKGKIVSANKEKKLLRLTSCLSSFVSESSVDHEIVKVDIQE 1247

Query: 321  ---------QQFSQGDIVAGRIKKIFAGVGGLLVQIGPHLCGRVHYTEVVDEWVPYPLRG 473
                     +   QG+IV G++K+I  GV GLLVQIGPHL G+ HYTE+VD WV  PL G
Sbjct: 1248 NRVSNVNCAEHILQGNIVGGKVKRILPGVSGLLVQIGPHLFGKAHYTELVDAWVAQPLSG 1307

Query: 474  YQEGQFVKCKILDISHSSEGILHIDLSLRAXXXXXXXXXXXXXXX------RRYEKVDDL 635
            Y EGQFVKCKIL+I+ SSEG  H+DLSLR+                     +R+EK++DL
Sbjct: 1308 YHEGQFVKCKILEITRSSEGTAHVDLSLRSSLQDIQSVNSTALDNNLNTHIKRFEKIEDL 1367

Query: 636  QPSMNVQGYVKNISTKGCFILLSRVLDARILISNLSDGYIDDPEKEFPVGKLVHAKLLSV 815
             P+M+VQGYVK++++KGCFI+LSR++DARIL+SNLSDGYI++PEKEFP GKLVH ++LSV
Sbjct: 1368 HPNMDVQGYVKSVTSKGCFIMLSRMIDARILLSNLSDGYIENPEKEFPAGKLVHGRVLSV 1427

Query: 816  EASSKRVEATLRTGSEADNAKSSQASFKNLYVGDIITGQIRRIETYGLFITIDKANVVGL 995
            + +SKRVE TL+T  + + AKS    F NL+V DII+GQIRR E YGLFI ID  NVVGL
Sbjct: 1428 DPASKRVEVTLKTDMKTEVAKSDPGVFCNLHVSDIISGQIRRTEPYGLFIAIDNTNVVGL 1487

Query: 996  CHTSELSDDHIDNLEANYKTGDKVLAKILKIDNERMRVSLGMKKSYVDDAGSVEQNCXXX 1175
            CH SELSD+ IDN+E  YK GD+V+A +LK+D ER R+SLGMKKSY  +A  V       
Sbjct: 1488 CHKSELSDEPIDNIETRYKAGDRVVATVLKVDEERHRISLGMKKSYFGNASDVH------ 1541

Query: 1176 XXXXXXXXXXXGASSLDDTFLDLQHKDDLTKCKMMYNSDIGGSEILVQPGRTTCVLPLQX 1355
                          S+D T L LQ  DDL   + M+  D     +L Q      VLPLQ 
Sbjct: 1542 ----IISNHGTDDDSVDGTLLALQQNDDLPHIEKMFGCDNEDPAVLKQAETRASVLPLQV 1597

Query: 1356 XXXXXXXXXXXNPVSANQDDAKVSEQXXXXXXXXXXXXXXXXXXXXXXXXX-RHLQNDMP 1532
                       N V+ +Q+   V++                           R+LQ D+P
Sbjct: 1598 VLDDSDGSDLDN-VTVSQEIVNVTDMAAKKSARRMKKKAKEERELEISASEERNLQKDIP 1656

Query: 1533 RTEDEFEKLVRRSPNSSFVWIKYMAYMLSLADVEKARSTAERALRTINIREEAEKLNIWV 1712
            +T DE+EKLVR SPNSSFVWIKYMA+MLSLADVEKARS AERALRTINIREE EKLNIWV
Sbjct: 1657 KTADEYEKLVRSSPNSSFVWIKYMAFMLSLADVEKARSIAERALRTINIREEGEKLNIWV 1716

Query: 1713 AYFNLENEYGSPPEEAVKKLFQRALQYCDPKKLHLALLGVYERTEQYNLVDELTERMTKK 1892
            AYFNLENEYGSPPEEAVKK FQRALQYCDPKKLHLALLG+YERTEQ+ L DEL ERMTKK
Sbjct: 1717 AYFNLENEYGSPPEEAVKKTFQRALQYCDPKKLHLALLGMYERTEQHKLADELLERMTKK 1776

Query: 1893 FKHSCKVWLRCIQNFLKKNKDGIQSIINRALLSLPHKKHIKFISQTALLEFKIGSAERGR 2072
            FK+SCKVWL C+Q+F+K+ KDGIQ I+NRALLSLPH KHIKFISQTA+LEFK G  +RGR
Sbjct: 1777 FKNSCKVWLHCVQSFMKQRKDGIQPIVNRALLSLPHNKHIKFISQTAILEFKCGVPDRGR 1836

Query: 2073 SMFESILREYPKRTDLWSIYLDREIRLGDAEVIRALFERATCLGXXXXXXXXXXXXYLDY 2252
            SMFE ILREYPKRTDLWSIYLD+EIRLGD EVIRALFERAT L             YL+Y
Sbjct: 1837 SMFEGILREYPKRTDLWSIYLDQEIRLGDVEVIRALFERATSLSLPPKKMKFLFKKYLEY 1896

Query: 2253 EKAHGNEDTIEHVKRKAMEYVENTL 2327
            EKA G++D IEHVK +A+EYVE+ L
Sbjct: 1897 EKARGDDDRIEHVKNRALEYVESLL 1921


>ref|XP_023900321.1| rRNA biogenesis protein RRP5 [Quercus suber]
          Length = 1433

 Score =  803 bits (2073), Expect = 0.0
 Identities = 431/806 (53%), Positives = 543/806 (67%), Gaps = 31/806 (3%)
 Frame = +3

Query: 3    LSIKPSILSGSEEILTSCASEPLTFSXXXXXXXXXXXXXSEWVWLSVSRSVMAHMYILDS 182
            LS+KP +L+GS +I     +E + FS             SEWVW+++SR V A ++ILDS
Sbjct: 637  LSLKPKMLTGSSDIGDKLMTEDVDFSIGQCITGYVFKVDSEWVWVAISRDVRAQLFILDS 696

Query: 183  SCDPDELEKFQQRYVVGQAVKGRILNINAEKKLLRLTSYSSSM--------------HAD 320
            +C+P EL++FQ+R+ VG+AV G +L+IN EKKLLRL     ++              H +
Sbjct: 697  ACEPSELKEFQKRFQVGKAVSGHVLSINKEKKLLRLVLSPFALSKGHVNREDLEVDNHVN 756

Query: 321  QQ----FSQGDIVAGRIKKIFAGVGGLLVQIGPHLCGRVHYTEVVDEWVPYPLRGYQEGQ 488
            ++     ++GDIV GR+ KI +GVGGL+VQIGP L GRVHYTE+ +  VP PL GY EGQ
Sbjct: 757  EKCGAHINEGDIVGGRVSKILSGVGGLIVQIGPQLYGRVHYTELTESLVPDPLSGYHEGQ 816

Query: 489  FVKCKILDISHSSEGILHIDLSLR------AXXXXXXXXXXXXXXXRRYEKVDDLQPSMN 650
            FVKCK+L++S S +G  H+DLSLR                      +  E++++L P+M 
Sbjct: 817  FVKCKVLEVSRSVKGTTHVDLSLRFSLDGTPSQSSAEISNTLHPACKHVEQIEELHPNMV 876

Query: 651  VQGYVKNISTKGCFILLSRVLDARILISNLSDGYIDDPEKEFPVGKLVHAKLLSVEASSK 830
            VQGYVKN+++KGCFILLSR +DA+IL+SNLSDG++D+PEK+FPVGKL+  ++LSVE  SK
Sbjct: 877  VQGYVKNVTSKGCFILLSRKIDAKILLSNLSDGFVDNPEKDFPVGKLLIGRVLSVEPLSK 936

Query: 831  RVEATLRTGSEADNAKSSQASFKNLYVGDIITGQIRRIETYGLFITIDKANVVGLCHTSE 1010
            RVE TL+T   +   KS     + L+VGDII+G+I+RIE+YGLFITID  N+VGLCH SE
Sbjct: 937  RVEVTLKTLGASRARKSEINDLRTLHVGDIISGRIKRIESYGLFITIDNTNLVGLCHVSE 996

Query: 1011 LSDDHIDNLEANYKTGDKVLAKILKIDNERMRVSLGMKKSYVDDAGSVEQNCXXXXXXXX 1190
            LS+DHIDN+E  Y+ G+ V AKILK+D +R R+SLGMK +Y++D   +E           
Sbjct: 997  LSNDHIDNIETKYRVGESVTAKILKVDEQRHRISLGMKNAYIEDNDDIE-----LPSKQE 1051

Query: 1191 XXXXXXGASSLDDTFLDLQHKDDLTKCKMMYNSDIGGSE----ILVQPGRTTCVLPLQXX 1358
                     S+DDT L       L     + N DI G      +L Q      + PL+  
Sbjct: 1052 SDEATRENGSIDDTRLVTFPGSSLIG---LQNMDIEGENGDCLVLAQVESRASIPPLEVS 1108

Query: 1359 XXXXXXXXXXNPVSANQ---DDAKVSEQXXXXXXXXXXXXXXXXXXXXXXXXXRHLQNDM 1529
                      N VS+NQ   D+A    +                         R L+ND+
Sbjct: 1109 LDDIDQPDMDNLVSSNQAQIDEADTINE--KNKRRPKKKAKEEREQEIRAAEERLLENDI 1166

Query: 1530 PRTEDEFEKLVRRSPNSSFVWIKYMAYMLSLADVEKARSTAERALRTINIREEAEKLNIW 1709
            PRT DEFEKLVR SPNSSFVWIKYMA+MLS+ADVEKARS AERAL+ INIREE EKLNIW
Sbjct: 1167 PRTADEFEKLVRSSPNSSFVWIKYMAFMLSMADVEKARSIAERALQIINIREENEKLNIW 1226

Query: 1710 VAYFNLENEYGSPPEEAVKKLFQRALQYCDPKKLHLALLGVYERTEQYNLVDELTERMTK 1889
            VAYFNLENEYG+PPEEAV+K+FQRALQY DPKK+HLALLG+YERTEQ+ L DEL ++M K
Sbjct: 1227 VAYFNLENEYGNPPEEAVRKVFQRALQYNDPKKVHLALLGMYERTEQHKLTDELLDKMVK 1286

Query: 1890 KFKHSCKVWLRCIQNFLKKNKDGIQSIINRALLSLPHKKHIKFISQTALLEFKIGSAERG 2069
            K+KHSCKVWLR +Q  LK+ +D IQ ++NRALLSLP  KHIKFISQTA+LEFK G  +RG
Sbjct: 1287 KYKHSCKVWLRRVQRILKQTQDAIQPVVNRALLSLPRHKHIKFISQTAILEFKCGVPDRG 1346

Query: 2070 RSMFESILREYPKRTDLWSIYLDREIRLGDAEVIRALFERATCLGXXXXXXXXXXXXYLD 2249
            RSMFE ILREYPKRTDLWSIYLD+EIRLGDA+VIRALFERA  L             YL+
Sbjct: 1347 RSMFEGILREYPKRTDLWSIYLDQEIRLGDADVIRALFERAISLSLPTKKMKFFFKKYLE 1406

Query: 2250 YEKAHGNEDTIEHVKRKAMEYVENTL 2327
            YEK+HG+E+ IE VKRKAMEYVE+TL
Sbjct: 1407 YEKSHGDEERIESVKRKAMEYVESTL 1432


>gb|POE50885.1| rrna biogenesis protein rrp5 [Quercus suber]
          Length = 1474

 Score =  803 bits (2073), Expect = 0.0
 Identities = 431/806 (53%), Positives = 543/806 (67%), Gaps = 31/806 (3%)
 Frame = +3

Query: 3    LSIKPSILSGSEEILTSCASEPLTFSXXXXXXXXXXXXXSEWVWLSVSRSVMAHMYILDS 182
            LS+KP +L+GS +I     +E + FS             SEWVW+++SR V A ++ILDS
Sbjct: 678  LSLKPKMLTGSSDIGDKLMTEDVDFSIGQCITGYVFKVDSEWVWVAISRDVRAQLFILDS 737

Query: 183  SCDPDELEKFQQRYVVGQAVKGRILNINAEKKLLRLTSYSSSM--------------HAD 320
            +C+P EL++FQ+R+ VG+AV G +L+IN EKKLLRL     ++              H +
Sbjct: 738  ACEPSELKEFQKRFQVGKAVSGHVLSINKEKKLLRLVLSPFALSKGHVNREDLEVDNHVN 797

Query: 321  QQ----FSQGDIVAGRIKKIFAGVGGLLVQIGPHLCGRVHYTEVVDEWVPYPLRGYQEGQ 488
            ++     ++GDIV GR+ KI +GVGGL+VQIGP L GRVHYTE+ +  VP PL GY EGQ
Sbjct: 798  EKCGAHINEGDIVGGRVSKILSGVGGLIVQIGPQLYGRVHYTELTESLVPDPLSGYHEGQ 857

Query: 489  FVKCKILDISHSSEGILHIDLSLR------AXXXXXXXXXXXXXXXRRYEKVDDLQPSMN 650
            FVKCK+L++S S +G  H+DLSLR                      +  E++++L P+M 
Sbjct: 858  FVKCKVLEVSRSVKGTTHVDLSLRFSLDGTPSQSSAEISNTLHPACKHVEQIEELHPNMV 917

Query: 651  VQGYVKNISTKGCFILLSRVLDARILISNLSDGYIDDPEKEFPVGKLVHAKLLSVEASSK 830
            VQGYVKN+++KGCFILLSR +DA+IL+SNLSDG++D+PEK+FPVGKL+  ++LSVE  SK
Sbjct: 918  VQGYVKNVTSKGCFILLSRKIDAKILLSNLSDGFVDNPEKDFPVGKLLIGRVLSVEPLSK 977

Query: 831  RVEATLRTGSEADNAKSSQASFKNLYVGDIITGQIRRIETYGLFITIDKANVVGLCHTSE 1010
            RVE TL+T   +   KS     + L+VGDII+G+I+RIE+YGLFITID  N+VGLCH SE
Sbjct: 978  RVEVTLKTLGASRARKSEINDLRTLHVGDIISGRIKRIESYGLFITIDNTNLVGLCHVSE 1037

Query: 1011 LSDDHIDNLEANYKTGDKVLAKILKIDNERMRVSLGMKKSYVDDAGSVEQNCXXXXXXXX 1190
            LS+DHIDN+E  Y+ G+ V AKILK+D +R R+SLGMK +Y++D   +E           
Sbjct: 1038 LSNDHIDNIETKYRVGESVTAKILKVDEQRHRISLGMKNAYIEDNDDIE-----LPSKQE 1092

Query: 1191 XXXXXXGASSLDDTFLDLQHKDDLTKCKMMYNSDIGGSE----ILVQPGRTTCVLPLQXX 1358
                     S+DDT L       L     + N DI G      +L Q      + PL+  
Sbjct: 1093 SDEATRENGSIDDTRLVTFPGSSLIG---LQNMDIEGENGDCLVLAQVESRASIPPLEVS 1149

Query: 1359 XXXXXXXXXXNPVSANQ---DDAKVSEQXXXXXXXXXXXXXXXXXXXXXXXXXRHLQNDM 1529
                      N VS+NQ   D+A    +                         R L+ND+
Sbjct: 1150 LDDIDQPDMDNLVSSNQAQIDEADTINE--KNKRRPKKKAKEEREQEIRAAEERLLENDI 1207

Query: 1530 PRTEDEFEKLVRRSPNSSFVWIKYMAYMLSLADVEKARSTAERALRTINIREEAEKLNIW 1709
            PRT DEFEKLVR SPNSSFVWIKYMA+MLS+ADVEKARS AERAL+ INIREE EKLNIW
Sbjct: 1208 PRTADEFEKLVRSSPNSSFVWIKYMAFMLSMADVEKARSIAERALQIINIREENEKLNIW 1267

Query: 1710 VAYFNLENEYGSPPEEAVKKLFQRALQYCDPKKLHLALLGVYERTEQYNLVDELTERMTK 1889
            VAYFNLENEYG+PPEEAV+K+FQRALQY DPKK+HLALLG+YERTEQ+ L DEL ++M K
Sbjct: 1268 VAYFNLENEYGNPPEEAVRKVFQRALQYNDPKKVHLALLGMYERTEQHKLTDELLDKMVK 1327

Query: 1890 KFKHSCKVWLRCIQNFLKKNKDGIQSIINRALLSLPHKKHIKFISQTALLEFKIGSAERG 2069
            K+KHSCKVWLR +Q  LK+ +D IQ ++NRALLSLP  KHIKFISQTA+LEFK G  +RG
Sbjct: 1328 KYKHSCKVWLRRVQRILKQTQDAIQPVVNRALLSLPRHKHIKFISQTAILEFKCGVPDRG 1387

Query: 2070 RSMFESILREYPKRTDLWSIYLDREIRLGDAEVIRALFERATCLGXXXXXXXXXXXXYLD 2249
            RSMFE ILREYPKRTDLWSIYLD+EIRLGDA+VIRALFERA  L             YL+
Sbjct: 1388 RSMFEGILREYPKRTDLWSIYLDQEIRLGDADVIRALFERAISLSLPTKKMKFFFKKYLE 1447

Query: 2250 YEKAHGNEDTIEHVKRKAMEYVENTL 2327
            YEK+HG+E+ IE VKRKAMEYVE+TL
Sbjct: 1448 YEKSHGDEERIESVKRKAMEYVESTL 1473


>gb|KJB33049.1| hypothetical protein B456_006G145100 [Gossypium raimondii]
          Length = 1305

 Score =  787 bits (2032), Expect = 0.0
 Identities = 415/811 (51%), Positives = 534/811 (65%), Gaps = 36/811 (4%)
 Frame = +3

Query: 3    LSIKPSILSGSEEILTSCASEPLTFSXXXXXXXXXXXXXSEWVWLSVSRSVMAHMYILDS 182
            LSIKP++L+ + EI      E   FS             SEW WL++SR V A ++ILDS
Sbjct: 505  LSIKPAMLADTGEIGVKTTLEEFDFSTGQLVTGYVYKVDSEWAWLTISRHVKARLFILDS 564

Query: 183  SCDPDELEKFQQRYVVGQAVKGRILNINAEKKLLRLTSY-----SSSMHADQQ------- 326
             C+P+EL++FQ+R+ VG+ V G ILN+N +KKL+R+  +     S++   D+        
Sbjct: 565  GCEPNELQQFQERFKVGKPVSGHILNVNKDKKLIRIVRHPLGALSTTNVGDEDKRKGESD 624

Query: 327  -----------FSQGDIVAGRIKKIFAGVGGLLVQIGPHLCGRVHYTEVVDEWVPYPLRG 473
                         +GDI+ GRI KI  G+GGL+VQIGP+  GRVH+TE+ D W   PL G
Sbjct: 625  NNISDDSVIAHIHEGDILGGRISKILPGIGGLVVQIGPNNYGRVHFTELKDAWESDPLSG 684

Query: 474  YQEGQFVKCKILDISHSSEGILHIDLSLRAXXXXXXXXXXXXXXX------RRYEKVDDL 635
            Y EGQFVKCK+L++SHS++G +HIDLSLR                      +R EKV+DL
Sbjct: 685  YHEGQFVKCKVLEVSHSTKGTIHIDLSLRLSLDGMISKNPLKLASDADSTSKRAEKVEDL 744

Query: 636  QPSMNVQGYVKNISTKGCFILLSRVLDARILISNLSDGYIDDPEKEFPVGKLVHAKLLSV 815
             P+M VQGYVKN+  KGCFI+LSR +DA+IL+SNLS+GY++DP+KEFP+GKLV  ++L+V
Sbjct: 745  YPNMAVQGYVKNVIPKGCFIMLSRKVDAKILLSNLSNGYVNDPKKEFPIGKLVSGRVLAV 804

Query: 816  EASSKRVEATLRTGSEADNAKSSQASFKNLYVGDIITGQIRRIETYGLFITIDKANVVGL 995
            E  SKRVE TL+       +KS    F  L+VGDI++G+IRR+E+YGLFIT+D  N+VGL
Sbjct: 805  EPLSKRVEVTLKNSDTNGTSKSEINDFSRLHVGDIVSGRIRRVESYGLFITLDHTNMVGL 864

Query: 996  CHTSELSDDHIDNLEANYKTGDKVLAKILKIDNERMRVSLGMKKSYVDDAGSVEQNCXXX 1175
            CH SELSDDHI+N++ NY  G+KV AKILK+D ER R+SLGMK SY  D           
Sbjct: 865  CHFSELSDDHIENIQTNYAAGEKVKAKILKLDEERHRISLGMKNSYFTD----------- 913

Query: 1176 XXXXXXXXXXXGASSLDDTFLDLQHKDDLTKCKMMYNS---DI----GGSEILVQPGRTT 1334
                           +++T +     DD  +  ++ +S   DI    G S++L Q     
Sbjct: 914  DIDFQITEQEESDEDIEETGVADDDADDEARSILLTDSTGMDIEYRSGVSDVLAQAESRA 973

Query: 1335 CVLPLQXXXXXXXXXXXXNPVSANQDDAKVSEQXXXXXXXXXXXXXXXXXXXXXXXXXRH 1514
             + PL             N +S NQ++ +V+                           R 
Sbjct: 974  SIPPLDVTLDDIEHSDMENFISENQENNEVTAIDEKSKRQAKKKAKEERESEIRAAEERQ 1033

Query: 1515 LQNDMPRTEDEFEKLVRRSPNSSFVWIKYMAYMLSLADVEKARSTAERALRTINIREEAE 1694
            L+ D+PRT DEFEKLVR SPNSSFVWIKYMA+ML+ A++EKAR+ AERALRTINIREE E
Sbjct: 1034 LEKDVPRTTDEFEKLVRSSPNSSFVWIKYMAFMLNSANIEKARAIAERALRTINIREETE 1093

Query: 1695 KLNIWVAYFNLENEYGSPPEEAVKKLFQRALQYCDPKKLHLALLGVYERTEQYNLVDELT 1874
            KLNIWVAYFNLEN+YG+PPEEAV+K+FQRALQYCDPKK+H ALLG+YERTEQ+ L +EL 
Sbjct: 1094 KLNIWVAYFNLENQYGNPPEEAVQKVFQRALQYCDPKKVHFALLGMYERTEQHKLAEELL 1153

Query: 1875 ERMTKKFKHSCKVWLRCIQNFLKKNKDGIQSIINRALLSLPHKKHIKFISQTALLEFKIG 2054
            ++M+KKFKHSCKVWLR +Q  L + +DG+Q ++NRALL LP  KH+KFISQ A+LEFK G
Sbjct: 1154 DKMSKKFKHSCKVWLRRVQVLLTQQQDGVQPVVNRALLCLPRHKHVKFISQAAILEFKSG 1213

Query: 2055 SAERGRSMFESILREYPKRTDLWSIYLDREIRLGDAEVIRALFERATCLGXXXXXXXXXX 2234
              +RGRSMFE +LREYPKRTDLWSIYLD+EIRLGD +VIRALFERA  L           
Sbjct: 1214 VPDRGRSMFEGVLREYPKRTDLWSIYLDQEIRLGDEDVIRALFERAISLSLPPKKMKFLF 1273

Query: 2235 XXYLDYEKAHGNEDTIEHVKRKAMEYVENTL 2327
              YLDYEK+ G+E+ IE VKRKAM+YVE+TL
Sbjct: 1274 KKYLDYEKSRGDEERIESVKRKAMDYVESTL 1304



 Score = 68.6 bits (166), Expect = 7e-08
 Identities = 81/326 (24%), Positives = 139/326 (42%), Gaps = 32/326 (9%)
 Frame = +3

Query: 213  QQRYVVGQAVKGRILNINAEKKLLRL----------TSYSSSMHADQQ--FSQGDIVAGR 356
            Q+++V GQ V   ++ + + +   RL          T  SSS  A ++  ++ G +V   
Sbjct: 384  QKQFVNGQRVIATVMALPSPETSGRLLLLLNSIGEVTETSSSKRAKKKSSYNVGSLVPAE 443

Query: 357  IKKIFAGVGGLLVQIGPHLCGRVHYTEVVDEWV-PYPLRGYQEGQFVKCKILDISHSSEG 533
            + +I      L ++ G   CGRVH TEV D  V   P   ++ GQ +  +I+    + +G
Sbjct: 444  VTEIMPLE--LRLKFGIGFCGRVHITEVNDNNVLEKPFGNFKVGQTITARIVG-KPNQKG 500

Query: 534  ILHIDLSLRAXXXXXXXXXXXXXXXRRYEKVDDLQPSMNVQGYVKNISTKGCFILLSRVL 713
             L  DLS++                  +    D      V GYV  + ++  ++ +SR +
Sbjct: 501  HLW-DLSIKPAMLADTGEIGVKTTLEEF----DFSTGQLVTGYVYKVDSEWAWLTISRHV 555

Query: 714  DARILI--SNLSDGYIDDPEKEFPVGKLVHAKLLSVEASSKRVE---------ATLRTG- 857
             AR+ I  S      +   ++ F VGK V   +L+V    K +          +T   G 
Sbjct: 556  KARLFILDSGCEPNELQQFQERFKVGKPVSGHILNVNKDKKLIRIVRHPLGALSTTNVGD 615

Query: 858  -----SEADNAKSSQASFKNLYVGDIITGQIRRI--ETYGLFITIDKANVVGLCHTSELS 1016
                  E+DN  S  +   +++ GDI+ G+I +I     GL + I   N  G  H +EL 
Sbjct: 616  EDKRKGESDNNISDDSVIAHIHEGDILGGRISKILPGIGGLVVQIGPNN-YGRVHFTELK 674

Query: 1017 DDHIDNLEANYKTGDKVLAKILKIDN 1094
            D    +  + Y  G  V  K+L++ +
Sbjct: 675  DAWESDPLSGYHEGQFVKCKVLEVSH 700


>ref|XP_012485661.1| PREDICTED: protein RRP5 homolog isoform X3 [Gossypium raimondii]
          Length = 1893

 Score =  787 bits (2032), Expect = 0.0
 Identities = 415/811 (51%), Positives = 534/811 (65%), Gaps = 36/811 (4%)
 Frame = +3

Query: 3    LSIKPSILSGSEEILTSCASEPLTFSXXXXXXXXXXXXXSEWVWLSVSRSVMAHMYILDS 182
            LSIKP++L+ + EI      E   FS             SEW WL++SR V A ++ILDS
Sbjct: 1093 LSIKPAMLADTGEIGVKTTLEEFDFSTGQLVTGYVYKVDSEWAWLTISRHVKARLFILDS 1152

Query: 183  SCDPDELEKFQQRYVVGQAVKGRILNINAEKKLLRLTSY-----SSSMHADQQ------- 326
             C+P+EL++FQ+R+ VG+ V G ILN+N +KKL+R+  +     S++   D+        
Sbjct: 1153 GCEPNELQQFQERFKVGKPVSGHILNVNKDKKLIRIVRHPLGALSTTNVGDEDKRKGESD 1212

Query: 327  -----------FSQGDIVAGRIKKIFAGVGGLLVQIGPHLCGRVHYTEVVDEWVPYPLRG 473
                         +GDI+ GRI KI  G+GGL+VQIGP+  GRVH+TE+ D W   PL G
Sbjct: 1213 NNISDDSVIAHIHEGDILGGRISKILPGIGGLVVQIGPNNYGRVHFTELKDAWESDPLSG 1272

Query: 474  YQEGQFVKCKILDISHSSEGILHIDLSLRAXXXXXXXXXXXXXXX------RRYEKVDDL 635
            Y EGQFVKCK+L++SHS++G +HIDLSLR                      +R EKV+DL
Sbjct: 1273 YHEGQFVKCKVLEVSHSTKGTIHIDLSLRLSLDGMISKNPLKLASDADSTSKRAEKVEDL 1332

Query: 636  QPSMNVQGYVKNISTKGCFILLSRVLDARILISNLSDGYIDDPEKEFPVGKLVHAKLLSV 815
             P+M VQGYVKN+  KGCFI+LSR +DA+IL+SNLS+GY++DP+KEFP+GKLV  ++L+V
Sbjct: 1333 YPNMAVQGYVKNVIPKGCFIMLSRKVDAKILLSNLSNGYVNDPKKEFPIGKLVSGRVLAV 1392

Query: 816  EASSKRVEATLRTGSEADNAKSSQASFKNLYVGDIITGQIRRIETYGLFITIDKANVVGL 995
            E  SKRVE TL+       +KS    F  L+VGDI++G+IRR+E+YGLFIT+D  N+VGL
Sbjct: 1393 EPLSKRVEVTLKNSDTNGTSKSEINDFSRLHVGDIVSGRIRRVESYGLFITLDHTNMVGL 1452

Query: 996  CHTSELSDDHIDNLEANYKTGDKVLAKILKIDNERMRVSLGMKKSYVDDAGSVEQNCXXX 1175
            CH SELSDDHI+N++ NY  G+KV AKILK+D ER R+SLGMK SY  D           
Sbjct: 1453 CHFSELSDDHIENIQTNYAAGEKVKAKILKLDEERHRISLGMKNSYFTD----------- 1501

Query: 1176 XXXXXXXXXXXGASSLDDTFLDLQHKDDLTKCKMMYNS---DI----GGSEILVQPGRTT 1334
                           +++T +     DD  +  ++ +S   DI    G S++L Q     
Sbjct: 1502 DIDFQITEQEESDEDIEETGVADDDADDEARSILLTDSTGMDIEYRSGVSDVLAQAESRA 1561

Query: 1335 CVLPLQXXXXXXXXXXXXNPVSANQDDAKVSEQXXXXXXXXXXXXXXXXXXXXXXXXXRH 1514
             + PL             N +S NQ++ +V+                           R 
Sbjct: 1562 SIPPLDVTLDDIEHSDMENFISENQENNEVTAIDEKSKRQAKKKAKEERESEIRAAEERQ 1621

Query: 1515 LQNDMPRTEDEFEKLVRRSPNSSFVWIKYMAYMLSLADVEKARSTAERALRTINIREEAE 1694
            L+ D+PRT DEFEKLVR SPNSSFVWIKYMA+ML+ A++EKAR+ AERALRTINIREE E
Sbjct: 1622 LEKDVPRTTDEFEKLVRSSPNSSFVWIKYMAFMLNSANIEKARAIAERALRTINIREETE 1681

Query: 1695 KLNIWVAYFNLENEYGSPPEEAVKKLFQRALQYCDPKKLHLALLGVYERTEQYNLVDELT 1874
            KLNIWVAYFNLEN+YG+PPEEAV+K+FQRALQYCDPKK+H ALLG+YERTEQ+ L +EL 
Sbjct: 1682 KLNIWVAYFNLENQYGNPPEEAVQKVFQRALQYCDPKKVHFALLGMYERTEQHKLAEELL 1741

Query: 1875 ERMTKKFKHSCKVWLRCIQNFLKKNKDGIQSIINRALLSLPHKKHIKFISQTALLEFKIG 2054
            ++M+KKFKHSCKVWLR +Q  L + +DG+Q ++NRALL LP  KH+KFISQ A+LEFK G
Sbjct: 1742 DKMSKKFKHSCKVWLRRVQVLLTQQQDGVQPVVNRALLCLPRHKHVKFISQAAILEFKSG 1801

Query: 2055 SAERGRSMFESILREYPKRTDLWSIYLDREIRLGDAEVIRALFERATCLGXXXXXXXXXX 2234
              +RGRSMFE +LREYPKRTDLWSIYLD+EIRLGD +VIRALFERA  L           
Sbjct: 1802 VPDRGRSMFEGVLREYPKRTDLWSIYLDQEIRLGDEDVIRALFERAISLSLPPKKMKFLF 1861

Query: 2235 XXYLDYEKAHGNEDTIEHVKRKAMEYVENTL 2327
              YLDYEK+ G+E+ IE VKRKAM+YVE+TL
Sbjct: 1862 KKYLDYEKSRGDEERIESVKRKAMDYVESTL 1892


>ref|XP_012485660.1| PREDICTED: protein RRP5 homolog isoform X2 [Gossypium raimondii]
          Length = 1894

 Score =  787 bits (2032), Expect = 0.0
 Identities = 415/811 (51%), Positives = 534/811 (65%), Gaps = 36/811 (4%)
 Frame = +3

Query: 3    LSIKPSILSGSEEILTSCASEPLTFSXXXXXXXXXXXXXSEWVWLSVSRSVMAHMYILDS 182
            LSIKP++L+ + EI      E   FS             SEW WL++SR V A ++ILDS
Sbjct: 1094 LSIKPAMLADTGEIGVKTTLEEFDFSTGQLVTGYVYKVDSEWAWLTISRHVKARLFILDS 1153

Query: 183  SCDPDELEKFQQRYVVGQAVKGRILNINAEKKLLRLTSY-----SSSMHADQQ------- 326
             C+P+EL++FQ+R+ VG+ V G ILN+N +KKL+R+  +     S++   D+        
Sbjct: 1154 GCEPNELQQFQERFKVGKPVSGHILNVNKDKKLIRIVRHPLGALSTTNVGDEDKRKGESD 1213

Query: 327  -----------FSQGDIVAGRIKKIFAGVGGLLVQIGPHLCGRVHYTEVVDEWVPYPLRG 473
                         +GDI+ GRI KI  G+GGL+VQIGP+  GRVH+TE+ D W   PL G
Sbjct: 1214 NNISDDSVIAHIHEGDILGGRISKILPGIGGLVVQIGPNNYGRVHFTELKDAWESDPLSG 1273

Query: 474  YQEGQFVKCKILDISHSSEGILHIDLSLRAXXXXXXXXXXXXXXX------RRYEKVDDL 635
            Y EGQFVKCK+L++SHS++G +HIDLSLR                      +R EKV+DL
Sbjct: 1274 YHEGQFVKCKVLEVSHSTKGTIHIDLSLRLSLDGMISKNPLKLASDADSTSKRAEKVEDL 1333

Query: 636  QPSMNVQGYVKNISTKGCFILLSRVLDARILISNLSDGYIDDPEKEFPVGKLVHAKLLSV 815
             P+M VQGYVKN+  KGCFI+LSR +DA+IL+SNLS+GY++DP+KEFP+GKLV  ++L+V
Sbjct: 1334 YPNMAVQGYVKNVIPKGCFIMLSRKVDAKILLSNLSNGYVNDPKKEFPIGKLVSGRVLAV 1393

Query: 816  EASSKRVEATLRTGSEADNAKSSQASFKNLYVGDIITGQIRRIETYGLFITIDKANVVGL 995
            E  SKRVE TL+       +KS    F  L+VGDI++G+IRR+E+YGLFIT+D  N+VGL
Sbjct: 1394 EPLSKRVEVTLKNSDTNGTSKSEINDFSRLHVGDIVSGRIRRVESYGLFITLDHTNMVGL 1453

Query: 996  CHTSELSDDHIDNLEANYKTGDKVLAKILKIDNERMRVSLGMKKSYVDDAGSVEQNCXXX 1175
            CH SELSDDHI+N++ NY  G+KV AKILK+D ER R+SLGMK SY  D           
Sbjct: 1454 CHFSELSDDHIENIQTNYAAGEKVKAKILKLDEERHRISLGMKNSYFTD----------- 1502

Query: 1176 XXXXXXXXXXXGASSLDDTFLDLQHKDDLTKCKMMYNS---DI----GGSEILVQPGRTT 1334
                           +++T +     DD  +  ++ +S   DI    G S++L Q     
Sbjct: 1503 DIDFQITEQEESDEDIEETGVADDDADDEARSILLTDSTGMDIEYRSGVSDVLAQAESRA 1562

Query: 1335 CVLPLQXXXXXXXXXXXXNPVSANQDDAKVSEQXXXXXXXXXXXXXXXXXXXXXXXXXRH 1514
             + PL             N +S NQ++ +V+                           R 
Sbjct: 1563 SIPPLDVTLDDIEHSDMENFISENQENNEVTAIDEKSKRQAKKKAKEERESEIRAAEERQ 1622

Query: 1515 LQNDMPRTEDEFEKLVRRSPNSSFVWIKYMAYMLSLADVEKARSTAERALRTINIREEAE 1694
            L+ D+PRT DEFEKLVR SPNSSFVWIKYMA+ML+ A++EKAR+ AERALRTINIREE E
Sbjct: 1623 LEKDVPRTTDEFEKLVRSSPNSSFVWIKYMAFMLNSANIEKARAIAERALRTINIREETE 1682

Query: 1695 KLNIWVAYFNLENEYGSPPEEAVKKLFQRALQYCDPKKLHLALLGVYERTEQYNLVDELT 1874
            KLNIWVAYFNLEN+YG+PPEEAV+K+FQRALQYCDPKK+H ALLG+YERTEQ+ L +EL 
Sbjct: 1683 KLNIWVAYFNLENQYGNPPEEAVQKVFQRALQYCDPKKVHFALLGMYERTEQHKLAEELL 1742

Query: 1875 ERMTKKFKHSCKVWLRCIQNFLKKNKDGIQSIINRALLSLPHKKHIKFISQTALLEFKIG 2054
            ++M+KKFKHSCKVWLR +Q  L + +DG+Q ++NRALL LP  KH+KFISQ A+LEFK G
Sbjct: 1743 DKMSKKFKHSCKVWLRRVQVLLTQQQDGVQPVVNRALLCLPRHKHVKFISQAAILEFKSG 1802

Query: 2055 SAERGRSMFESILREYPKRTDLWSIYLDREIRLGDAEVIRALFERATCLGXXXXXXXXXX 2234
              +RGRSMFE +LREYPKRTDLWSIYLD+EIRLGD +VIRALFERA  L           
Sbjct: 1803 VPDRGRSMFEGVLREYPKRTDLWSIYLDQEIRLGDEDVIRALFERAISLSLPPKKMKFLF 1862

Query: 2235 XXYLDYEKAHGNEDTIEHVKRKAMEYVENTL 2327
              YLDYEK+ G+E+ IE VKRKAM+YVE+TL
Sbjct: 1863 KKYLDYEKSRGDEERIESVKRKAMDYVESTL 1893



 Score = 68.6 bits (166), Expect = 7e-08
 Identities = 81/326 (24%), Positives = 139/326 (42%), Gaps = 32/326 (9%)
 Frame = +3

Query: 213  QQRYVVGQAVKGRILNINAEKKLLRL----------TSYSSSMHADQQ--FSQGDIVAGR 356
            Q+++V GQ V   ++ + + +   RL          T  SSS  A ++  ++ G +V   
Sbjct: 973  QKQFVNGQRVIATVMALPSPETSGRLLLLLNSIGEVTETSSSKRAKKKSSYNVGSLVPAE 1032

Query: 357  IKKIFAGVGGLLVQIGPHLCGRVHYTEVVDEWV-PYPLRGYQEGQFVKCKILDISHSSEG 533
            + +I      L ++ G   CGRVH TEV D  V   P   ++ GQ +  +I+    + +G
Sbjct: 1033 VTEIMPLE--LRLKFGIGFCGRVHITEVNDNNVLEKPFGNFKVGQTITARIVG-KPNQKG 1089

Query: 534  ILHIDLSLRAXXXXXXXXXXXXXXXRRYEKVDDLQPSMNVQGYVKNISTKGCFILLSRVL 713
             L  DLS++                  +    D      V GYV  + ++  ++ +SR +
Sbjct: 1090 HLW-DLSIKPAMLADTGEIGVKTTLEEF----DFSTGQLVTGYVYKVDSEWAWLTISRHV 1144

Query: 714  DARILI--SNLSDGYIDDPEKEFPVGKLVHAKLLSVEASSKRVE---------ATLRTG- 857
             AR+ I  S      +   ++ F VGK V   +L+V    K +          +T   G 
Sbjct: 1145 KARLFILDSGCEPNELQQFQERFKVGKPVSGHILNVNKDKKLIRIVRHPLGALSTTNVGD 1204

Query: 858  -----SEADNAKSSQASFKNLYVGDIITGQIRRI--ETYGLFITIDKANVVGLCHTSELS 1016
                  E+DN  S  +   +++ GDI+ G+I +I     GL + I   N  G  H +EL 
Sbjct: 1205 EDKRKGESDNNISDDSVIAHIHEGDILGGRISKILPGIGGLVVQIGPNN-YGRVHFTELK 1263

Query: 1017 DDHIDNLEANYKTGDKVLAKILKIDN 1094
            D    +  + Y  G  V  K+L++ +
Sbjct: 1264 DAWESDPLSGYHEGQFVKCKVLEVSH 1289


>ref|XP_016671447.1| PREDICTED: rRNA biogenesis protein RRP5-like isoform X2 [Gossypium
            hirsutum]
          Length = 1888

 Score =  786 bits (2030), Expect = 0.0
 Identities = 416/808 (51%), Positives = 532/808 (65%), Gaps = 33/808 (4%)
 Frame = +3

Query: 3    LSIKPSILSGSEEILTSCASEPLTFSXXXXXXXXXXXXXSEWVWLSVSRSVMAHMYILDS 182
            LSIKP++L+ + EI      E   FS             SEW WL++SR V A ++ILDS
Sbjct: 1093 LSIKPAMLADTGEIGVKTTLEEFDFSTGQLVTGYVYKVDSEWGWLTISRHVKARLFILDS 1152

Query: 183  SCDPDELEKFQQRYVVGQAVKGRILNINAEKKLLRLTSY-------------------SS 305
             C+P+EL++FQ+R+ VG+ V G ILN+N +KKLLR+  +                   S 
Sbjct: 1153 GCEPNELQQFQERFKVGKPVSGHILNVNKDKKLLRIVRHPLGALSTTNVGDEDKRKGESD 1212

Query: 306  SMHADQQFS---QGDIVAGRIKKIFAGVGGLLVQIGPHLCGRVHYTEVVDEWVPYPLRGY 476
            ++  D   +   +GDI+ GRI KI  G+GGL+VQIGP+  GRVH+TE+ D W   PL GY
Sbjct: 1213 NISDDSVIAHIHEGDILGGRISKILPGIGGLVVQIGPNNYGRVHFTELKDAWESDPLSGY 1272

Query: 477  QEGQFVKCKILDISHSSEGILHIDLSLRAXXXXXXXXXXXXXXX------RRYEKVDDLQ 638
             EGQFVKCK+L++SHS++G +HIDLSLR                      +R EKV+DL 
Sbjct: 1273 HEGQFVKCKVLEVSHSTKGTIHIDLSLRLSLDGMISKNPLELASDADSTSKRAEKVEDLY 1332

Query: 639  PSMNVQGYVKNISTKGCFILLSRVLDARILISNLSDGYIDDPEKEFPVGKLVHAKLLSVE 818
            P+M VQGYVKN+  KGCFI+LSR +DA+IL+SNLS+GY++DP+KEFP+GKLV  ++L+VE
Sbjct: 1333 PNMAVQGYVKNVIPKGCFIMLSRKVDAKILLSNLSNGYVNDPKKEFPIGKLVSGRVLAVE 1392

Query: 819  ASSKRVEATLRTGSEADNAKSSQASFKNLYVGDIITGQIRRIETYGLFITIDKANVVGLC 998
              SKRVE TL+       +KS    F  L+VGDI++G+IRR+E+YGLFIT+D  N+VGLC
Sbjct: 1393 PLSKRVEVTLKNSDTNGTSKSEINDFSRLHVGDIVSGRIRRVESYGLFITLDHTNMVGLC 1452

Query: 999  HTSELSDDHIDNLEANYKTGDKVLAKILKIDNERMRVSLGMKKSYVDDAGS---VEQNCX 1169
            H SEL+DDHI+N++ NY  G+KV AKILK+D ER R+SLGMK SY  D       EQ   
Sbjct: 1453 HFSELADDHIENIQTNYAAGEKVKAKILKLDEERHRISLGMKNSYFTDDIDFQITEQEES 1512

Query: 1170 XXXXXXXXXXXXXGASSL--DDTFLDLQHKDDLTKCKMMYNSDIGGSEILVQPGRTTCVL 1343
                           S L  D T +D++++              G S++L Q      + 
Sbjct: 1513 DEDIEETGVADDEARSILLTDRTGMDIEYRS-------------GVSDVLAQAESRASIP 1559

Query: 1344 PLQXXXXXXXXXXXXNPVSANQDDAKVSEQXXXXXXXXXXXXXXXXXXXXXXXXXRHLQN 1523
            PL             N +S NQ++ +V+                           R L+ 
Sbjct: 1560 PLDVTLDDIEHSDMENFISENQENNEVTAIDETSKRQAKKKAKEERESEIRAAEERQLEK 1619

Query: 1524 DMPRTEDEFEKLVRRSPNSSFVWIKYMAYMLSLADVEKARSTAERALRTINIREEAEKLN 1703
            D+PRT DEFEKLVR SPNSSFVWIKYMA+ML+ A++EKAR+ AERALRTINIREE EKLN
Sbjct: 1620 DVPRTTDEFEKLVRSSPNSSFVWIKYMAFMLNSANIEKARAIAERALRTINIREETEKLN 1679

Query: 1704 IWVAYFNLENEYGSPPEEAVKKLFQRALQYCDPKKLHLALLGVYERTEQYNLVDELTERM 1883
            IWVAYFNLEN+YG+PPEEAV+K+FQRALQYCDPKK+H ALLG+YERTEQ+ L +EL ++M
Sbjct: 1680 IWVAYFNLENQYGNPPEEAVQKVFQRALQYCDPKKVHFALLGMYERTEQHKLAEELLDKM 1739

Query: 1884 TKKFKHSCKVWLRCIQNFLKKNKDGIQSIINRALLSLPHKKHIKFISQTALLEFKIGSAE 2063
            +KKFKHSCKVWLR +Q  L + +DG+Q ++NRALL LP  KH+KFISQ A+LEFK G  +
Sbjct: 1740 SKKFKHSCKVWLRRVQVLLTQQQDGVQPVVNRALLCLPRHKHVKFISQAAILEFKSGVPD 1799

Query: 2064 RGRSMFESILREYPKRTDLWSIYLDREIRLGDAEVIRALFERATCLGXXXXXXXXXXXXY 2243
            RGRSMFE +LREYPKRTDLWSIYLD+EIRLGD +VIRALFERA  L             Y
Sbjct: 1800 RGRSMFEGVLREYPKRTDLWSIYLDQEIRLGDEDVIRALFERAISLSLPPKKMKFLFKKY 1859

Query: 2244 LDYEKAHGNEDTIEHVKRKAMEYVENTL 2327
            LDYEK+ G+E+ IE VKRKAM+YVE+TL
Sbjct: 1860 LDYEKSRGDEERIESVKRKAMDYVESTL 1887


>gb|KJB33048.1| hypothetical protein B456_006G145100 [Gossypium raimondii]
          Length = 1927

 Score =  787 bits (2032), Expect = 0.0
 Identities = 415/811 (51%), Positives = 534/811 (65%), Gaps = 36/811 (4%)
 Frame = +3

Query: 3    LSIKPSILSGSEEILTSCASEPLTFSXXXXXXXXXXXXXSEWVWLSVSRSVMAHMYILDS 182
            LSIKP++L+ + EI      E   FS             SEW WL++SR V A ++ILDS
Sbjct: 1127 LSIKPAMLADTGEIGVKTTLEEFDFSTGQLVTGYVYKVDSEWAWLTISRHVKARLFILDS 1186

Query: 183  SCDPDELEKFQQRYVVGQAVKGRILNINAEKKLLRLTSY-----SSSMHADQQ------- 326
             C+P+EL++FQ+R+ VG+ V G ILN+N +KKL+R+  +     S++   D+        
Sbjct: 1187 GCEPNELQQFQERFKVGKPVSGHILNVNKDKKLIRIVRHPLGALSTTNVGDEDKRKGESD 1246

Query: 327  -----------FSQGDIVAGRIKKIFAGVGGLLVQIGPHLCGRVHYTEVVDEWVPYPLRG 473
                         +GDI+ GRI KI  G+GGL+VQIGP+  GRVH+TE+ D W   PL G
Sbjct: 1247 NNISDDSVIAHIHEGDILGGRISKILPGIGGLVVQIGPNNYGRVHFTELKDAWESDPLSG 1306

Query: 474  YQEGQFVKCKILDISHSSEGILHIDLSLRAXXXXXXXXXXXXXXX------RRYEKVDDL 635
            Y EGQFVKCK+L++SHS++G +HIDLSLR                      +R EKV+DL
Sbjct: 1307 YHEGQFVKCKVLEVSHSTKGTIHIDLSLRLSLDGMISKNPLKLASDADSTSKRAEKVEDL 1366

Query: 636  QPSMNVQGYVKNISTKGCFILLSRVLDARILISNLSDGYIDDPEKEFPVGKLVHAKLLSV 815
             P+M VQGYVKN+  KGCFI+LSR +DA+IL+SNLS+GY++DP+KEFP+GKLV  ++L+V
Sbjct: 1367 YPNMAVQGYVKNVIPKGCFIMLSRKVDAKILLSNLSNGYVNDPKKEFPIGKLVSGRVLAV 1426

Query: 816  EASSKRVEATLRTGSEADNAKSSQASFKNLYVGDIITGQIRRIETYGLFITIDKANVVGL 995
            E  SKRVE TL+       +KS    F  L+VGDI++G+IRR+E+YGLFIT+D  N+VGL
Sbjct: 1427 EPLSKRVEVTLKNSDTNGTSKSEINDFSRLHVGDIVSGRIRRVESYGLFITLDHTNMVGL 1486

Query: 996  CHTSELSDDHIDNLEANYKTGDKVLAKILKIDNERMRVSLGMKKSYVDDAGSVEQNCXXX 1175
            CH SELSDDHI+N++ NY  G+KV AKILK+D ER R+SLGMK SY  D           
Sbjct: 1487 CHFSELSDDHIENIQTNYAAGEKVKAKILKLDEERHRISLGMKNSYFTD----------- 1535

Query: 1176 XXXXXXXXXXXGASSLDDTFLDLQHKDDLTKCKMMYNS---DI----GGSEILVQPGRTT 1334
                           +++T +     DD  +  ++ +S   DI    G S++L Q     
Sbjct: 1536 DIDFQITEQEESDEDIEETGVADDDADDEARSILLTDSTGMDIEYRSGVSDVLAQAESRA 1595

Query: 1335 CVLPLQXXXXXXXXXXXXNPVSANQDDAKVSEQXXXXXXXXXXXXXXXXXXXXXXXXXRH 1514
             + PL             N +S NQ++ +V+                           R 
Sbjct: 1596 SIPPLDVTLDDIEHSDMENFISENQENNEVTAIDEKSKRQAKKKAKEERESEIRAAEERQ 1655

Query: 1515 LQNDMPRTEDEFEKLVRRSPNSSFVWIKYMAYMLSLADVEKARSTAERALRTINIREEAE 1694
            L+ D+PRT DEFEKLVR SPNSSFVWIKYMA+ML+ A++EKAR+ AERALRTINIREE E
Sbjct: 1656 LEKDVPRTTDEFEKLVRSSPNSSFVWIKYMAFMLNSANIEKARAIAERALRTINIREETE 1715

Query: 1695 KLNIWVAYFNLENEYGSPPEEAVKKLFQRALQYCDPKKLHLALLGVYERTEQYNLVDELT 1874
            KLNIWVAYFNLEN+YG+PPEEAV+K+FQRALQYCDPKK+H ALLG+YERTEQ+ L +EL 
Sbjct: 1716 KLNIWVAYFNLENQYGNPPEEAVQKVFQRALQYCDPKKVHFALLGMYERTEQHKLAEELL 1775

Query: 1875 ERMTKKFKHSCKVWLRCIQNFLKKNKDGIQSIINRALLSLPHKKHIKFISQTALLEFKIG 2054
            ++M+KKFKHSCKVWLR +Q  L + +DG+Q ++NRALL LP  KH+KFISQ A+LEFK G
Sbjct: 1776 DKMSKKFKHSCKVWLRRVQVLLTQQQDGVQPVVNRALLCLPRHKHVKFISQAAILEFKSG 1835

Query: 2055 SAERGRSMFESILREYPKRTDLWSIYLDREIRLGDAEVIRALFERATCLGXXXXXXXXXX 2234
              +RGRSMFE +LREYPKRTDLWSIYLD+EIRLGD +VIRALFERA  L           
Sbjct: 1836 VPDRGRSMFEGVLREYPKRTDLWSIYLDQEIRLGDEDVIRALFERAISLSLPPKKMKFLF 1895

Query: 2235 XXYLDYEKAHGNEDTIEHVKRKAMEYVENTL 2327
              YLDYEK+ G+E+ IE VKRKAM+YVE+TL
Sbjct: 1896 KKYLDYEKSRGDEERIESVKRKAMDYVESTL 1926



 Score = 68.6 bits (166), Expect = 7e-08
 Identities = 81/326 (24%), Positives = 139/326 (42%), Gaps = 32/326 (9%)
 Frame = +3

Query: 213  QQRYVVGQAVKGRILNINAEKKLLRL----------TSYSSSMHADQQ--FSQGDIVAGR 356
            Q+++V GQ V   ++ + + +   RL          T  SSS  A ++  ++ G +V   
Sbjct: 1006 QKQFVNGQRVIATVMALPSPETSGRLLLLLNSIGEVTETSSSKRAKKKSSYNVGSLVPAE 1065

Query: 357  IKKIFAGVGGLLVQIGPHLCGRVHYTEVVDEWV-PYPLRGYQEGQFVKCKILDISHSSEG 533
            + +I      L ++ G   CGRVH TEV D  V   P   ++ GQ +  +I+    + +G
Sbjct: 1066 VTEIMPLE--LRLKFGIGFCGRVHITEVNDNNVLEKPFGNFKVGQTITARIVG-KPNQKG 1122

Query: 534  ILHIDLSLRAXXXXXXXXXXXXXXXRRYEKVDDLQPSMNVQGYVKNISTKGCFILLSRVL 713
             L  DLS++                  +    D      V GYV  + ++  ++ +SR +
Sbjct: 1123 HLW-DLSIKPAMLADTGEIGVKTTLEEF----DFSTGQLVTGYVYKVDSEWAWLTISRHV 1177

Query: 714  DARILI--SNLSDGYIDDPEKEFPVGKLVHAKLLSVEASSKRVE---------ATLRTG- 857
             AR+ I  S      +   ++ F VGK V   +L+V    K +          +T   G 
Sbjct: 1178 KARLFILDSGCEPNELQQFQERFKVGKPVSGHILNVNKDKKLIRIVRHPLGALSTTNVGD 1237

Query: 858  -----SEADNAKSSQASFKNLYVGDIITGQIRRI--ETYGLFITIDKANVVGLCHTSELS 1016
                  E+DN  S  +   +++ GDI+ G+I +I     GL + I   N  G  H +EL 
Sbjct: 1238 EDKRKGESDNNISDDSVIAHIHEGDILGGRISKILPGIGGLVVQIGPNN-YGRVHFTELK 1296

Query: 1017 DDHIDNLEANYKTGDKVLAKILKIDN 1094
            D    +  + Y  G  V  K+L++ +
Sbjct: 1297 DAWESDPLSGYHEGQFVKCKVLEVSH 1322


>gb|KJB33045.1| hypothetical protein B456_006G145100 [Gossypium raimondii]
          Length = 1927

 Score =  787 bits (2032), Expect = 0.0
 Identities = 415/811 (51%), Positives = 534/811 (65%), Gaps = 36/811 (4%)
 Frame = +3

Query: 3    LSIKPSILSGSEEILTSCASEPLTFSXXXXXXXXXXXXXSEWVWLSVSRSVMAHMYILDS 182
            LSIKP++L+ + EI      E   FS             SEW WL++SR V A ++ILDS
Sbjct: 1127 LSIKPAMLADTGEIGVKTTLEEFDFSTGQLVTGYVYKVDSEWAWLTISRHVKARLFILDS 1186

Query: 183  SCDPDELEKFQQRYVVGQAVKGRILNINAEKKLLRLTSY-----SSSMHADQQ------- 326
             C+P+EL++FQ+R+ VG+ V G ILN+N +KKL+R+  +     S++   D+        
Sbjct: 1187 GCEPNELQQFQERFKVGKPVSGHILNVNKDKKLIRIVRHPLGALSTTNVGDEDKRKGESD 1246

Query: 327  -----------FSQGDIVAGRIKKIFAGVGGLLVQIGPHLCGRVHYTEVVDEWVPYPLRG 473
                         +GDI+ GRI KI  G+GGL+VQIGP+  GRVH+TE+ D W   PL G
Sbjct: 1247 NNISDDSVIAHIHEGDILGGRISKILPGIGGLVVQIGPNNYGRVHFTELKDAWESDPLSG 1306

Query: 474  YQEGQFVKCKILDISHSSEGILHIDLSLRAXXXXXXXXXXXXXXX------RRYEKVDDL 635
            Y EGQFVKCK+L++SHS++G +HIDLSLR                      +R EKV+DL
Sbjct: 1307 YHEGQFVKCKVLEVSHSTKGTIHIDLSLRLSLDGMISKNPLKLASDADSTSKRAEKVEDL 1366

Query: 636  QPSMNVQGYVKNISTKGCFILLSRVLDARILISNLSDGYIDDPEKEFPVGKLVHAKLLSV 815
             P+M VQGYVKN+  KGCFI+LSR +DA+IL+SNLS+GY++DP+KEFP+GKLV  ++L+V
Sbjct: 1367 YPNMAVQGYVKNVIPKGCFIMLSRKVDAKILLSNLSNGYVNDPKKEFPIGKLVSGRVLAV 1426

Query: 816  EASSKRVEATLRTGSEADNAKSSQASFKNLYVGDIITGQIRRIETYGLFITIDKANVVGL 995
            E  SKRVE TL+       +KS    F  L+VGDI++G+IRR+E+YGLFIT+D  N+VGL
Sbjct: 1427 EPLSKRVEVTLKNSDTNGTSKSEINDFSRLHVGDIVSGRIRRVESYGLFITLDHTNMVGL 1486

Query: 996  CHTSELSDDHIDNLEANYKTGDKVLAKILKIDNERMRVSLGMKKSYVDDAGSVEQNCXXX 1175
            CH SELSDDHI+N++ NY  G+KV AKILK+D ER R+SLGMK SY  D           
Sbjct: 1487 CHFSELSDDHIENIQTNYAAGEKVKAKILKLDEERHRISLGMKNSYFTD----------- 1535

Query: 1176 XXXXXXXXXXXGASSLDDTFLDLQHKDDLTKCKMMYNS---DI----GGSEILVQPGRTT 1334
                           +++T +     DD  +  ++ +S   DI    G S++L Q     
Sbjct: 1536 DIDFQITEQEESDEDIEETGVADDDADDEARSILLTDSTGMDIEYRSGVSDVLAQAESRA 1595

Query: 1335 CVLPLQXXXXXXXXXXXXNPVSANQDDAKVSEQXXXXXXXXXXXXXXXXXXXXXXXXXRH 1514
             + PL             N +S NQ++ +V+                           R 
Sbjct: 1596 SIPPLDVTLDDIEHSDMENFISENQENNEVTAIDEKSKRQAKKKAKEERESEIRAAEERQ 1655

Query: 1515 LQNDMPRTEDEFEKLVRRSPNSSFVWIKYMAYMLSLADVEKARSTAERALRTINIREEAE 1694
            L+ D+PRT DEFEKLVR SPNSSFVWIKYMA+ML+ A++EKAR+ AERALRTINIREE E
Sbjct: 1656 LEKDVPRTTDEFEKLVRSSPNSSFVWIKYMAFMLNSANIEKARAIAERALRTINIREETE 1715

Query: 1695 KLNIWVAYFNLENEYGSPPEEAVKKLFQRALQYCDPKKLHLALLGVYERTEQYNLVDELT 1874
            KLNIWVAYFNLEN+YG+PPEEAV+K+FQRALQYCDPKK+H ALLG+YERTEQ+ L +EL 
Sbjct: 1716 KLNIWVAYFNLENQYGNPPEEAVQKVFQRALQYCDPKKVHFALLGMYERTEQHKLAEELL 1775

Query: 1875 ERMTKKFKHSCKVWLRCIQNFLKKNKDGIQSIINRALLSLPHKKHIKFISQTALLEFKIG 2054
            ++M+KKFKHSCKVWLR +Q  L + +DG+Q ++NRALL LP  KH+KFISQ A+LEFK G
Sbjct: 1776 DKMSKKFKHSCKVWLRRVQVLLTQQQDGVQPVVNRALLCLPRHKHVKFISQAAILEFKSG 1835

Query: 2055 SAERGRSMFESILREYPKRTDLWSIYLDREIRLGDAEVIRALFERATCLGXXXXXXXXXX 2234
              +RGRSMFE +LREYPKRTDLWSIYLD+EIRLGD +VIRALFERA  L           
Sbjct: 1836 VPDRGRSMFEGVLREYPKRTDLWSIYLDQEIRLGDEDVIRALFERAISLSLPPKKMKFLF 1895

Query: 2235 XXYLDYEKAHGNEDTIEHVKRKAMEYVENTL 2327
              YLDYEK+ G+E+ IE VKRKAM+YVE+TL
Sbjct: 1896 KKYLDYEKSRGDEERIESVKRKAMDYVESTL 1926



 Score = 68.6 bits (166), Expect = 7e-08
 Identities = 81/326 (24%), Positives = 139/326 (42%), Gaps = 32/326 (9%)
 Frame = +3

Query: 213  QQRYVVGQAVKGRILNINAEKKLLRL----------TSYSSSMHADQQ--FSQGDIVAGR 356
            Q+++V GQ V   ++ + + +   RL          T  SSS  A ++  ++ G +V   
Sbjct: 1006 QKQFVNGQRVIATVMALPSPETSGRLLLLLNSIGEVTETSSSKRAKKKSSYNVGSLVPAE 1065

Query: 357  IKKIFAGVGGLLVQIGPHLCGRVHYTEVVDEWV-PYPLRGYQEGQFVKCKILDISHSSEG 533
            + +I      L ++ G   CGRVH TEV D  V   P   ++ GQ +  +I+    + +G
Sbjct: 1066 VTEIMPLE--LRLKFGIGFCGRVHITEVNDNNVLEKPFGNFKVGQTITARIVG-KPNQKG 1122

Query: 534  ILHIDLSLRAXXXXXXXXXXXXXXXRRYEKVDDLQPSMNVQGYVKNISTKGCFILLSRVL 713
             L  DLS++                  +    D      V GYV  + ++  ++ +SR +
Sbjct: 1123 HLW-DLSIKPAMLADTGEIGVKTTLEEF----DFSTGQLVTGYVYKVDSEWAWLTISRHV 1177

Query: 714  DARILI--SNLSDGYIDDPEKEFPVGKLVHAKLLSVEASSKRVE---------ATLRTG- 857
             AR+ I  S      +   ++ F VGK V   +L+V    K +          +T   G 
Sbjct: 1178 KARLFILDSGCEPNELQQFQERFKVGKPVSGHILNVNKDKKLIRIVRHPLGALSTTNVGD 1237

Query: 858  -----SEADNAKSSQASFKNLYVGDIITGQIRRI--ETYGLFITIDKANVVGLCHTSELS 1016
                  E+DN  S  +   +++ GDI+ G+I +I     GL + I   N  G  H +EL 
Sbjct: 1238 EDKRKGESDNNISDDSVIAHIHEGDILGGRISKILPGIGGLVVQIGPNN-YGRVHFTELK 1296

Query: 1017 DDHIDNLEANYKTGDKVLAKILKIDN 1094
            D    +  + Y  G  V  K+L++ +
Sbjct: 1297 DAWESDPLSGYHEGQFVKCKVLEVSH 1322


>ref|XP_012485659.1| PREDICTED: protein RRP5 homolog isoform X1 [Gossypium raimondii]
 gb|KJB33042.1| hypothetical protein B456_006G145100 [Gossypium raimondii]
          Length = 1928

 Score =  787 bits (2032), Expect = 0.0
 Identities = 415/811 (51%), Positives = 534/811 (65%), Gaps = 36/811 (4%)
 Frame = +3

Query: 3    LSIKPSILSGSEEILTSCASEPLTFSXXXXXXXXXXXXXSEWVWLSVSRSVMAHMYILDS 182
            LSIKP++L+ + EI      E   FS             SEW WL++SR V A ++ILDS
Sbjct: 1128 LSIKPAMLADTGEIGVKTTLEEFDFSTGQLVTGYVYKVDSEWAWLTISRHVKARLFILDS 1187

Query: 183  SCDPDELEKFQQRYVVGQAVKGRILNINAEKKLLRLTSY-----SSSMHADQQ------- 326
             C+P+EL++FQ+R+ VG+ V G ILN+N +KKL+R+  +     S++   D+        
Sbjct: 1188 GCEPNELQQFQERFKVGKPVSGHILNVNKDKKLIRIVRHPLGALSTTNVGDEDKRKGESD 1247

Query: 327  -----------FSQGDIVAGRIKKIFAGVGGLLVQIGPHLCGRVHYTEVVDEWVPYPLRG 473
                         +GDI+ GRI KI  G+GGL+VQIGP+  GRVH+TE+ D W   PL G
Sbjct: 1248 NNISDDSVIAHIHEGDILGGRISKILPGIGGLVVQIGPNNYGRVHFTELKDAWESDPLSG 1307

Query: 474  YQEGQFVKCKILDISHSSEGILHIDLSLRAXXXXXXXXXXXXXXX------RRYEKVDDL 635
            Y EGQFVKCK+L++SHS++G +HIDLSLR                      +R EKV+DL
Sbjct: 1308 YHEGQFVKCKVLEVSHSTKGTIHIDLSLRLSLDGMISKNPLKLASDADSTSKRAEKVEDL 1367

Query: 636  QPSMNVQGYVKNISTKGCFILLSRVLDARILISNLSDGYIDDPEKEFPVGKLVHAKLLSV 815
             P+M VQGYVKN+  KGCFI+LSR +DA+IL+SNLS+GY++DP+KEFP+GKLV  ++L+V
Sbjct: 1368 YPNMAVQGYVKNVIPKGCFIMLSRKVDAKILLSNLSNGYVNDPKKEFPIGKLVSGRVLAV 1427

Query: 816  EASSKRVEATLRTGSEADNAKSSQASFKNLYVGDIITGQIRRIETYGLFITIDKANVVGL 995
            E  SKRVE TL+       +KS    F  L+VGDI++G+IRR+E+YGLFIT+D  N+VGL
Sbjct: 1428 EPLSKRVEVTLKNSDTNGTSKSEINDFSRLHVGDIVSGRIRRVESYGLFITLDHTNMVGL 1487

Query: 996  CHTSELSDDHIDNLEANYKTGDKVLAKILKIDNERMRVSLGMKKSYVDDAGSVEQNCXXX 1175
            CH SELSDDHI+N++ NY  G+KV AKILK+D ER R+SLGMK SY  D           
Sbjct: 1488 CHFSELSDDHIENIQTNYAAGEKVKAKILKLDEERHRISLGMKNSYFTD----------- 1536

Query: 1176 XXXXXXXXXXXGASSLDDTFLDLQHKDDLTKCKMMYNS---DI----GGSEILVQPGRTT 1334
                           +++T +     DD  +  ++ +S   DI    G S++L Q     
Sbjct: 1537 DIDFQITEQEESDEDIEETGVADDDADDEARSILLTDSTGMDIEYRSGVSDVLAQAESRA 1596

Query: 1335 CVLPLQXXXXXXXXXXXXNPVSANQDDAKVSEQXXXXXXXXXXXXXXXXXXXXXXXXXRH 1514
             + PL             N +S NQ++ +V+                           R 
Sbjct: 1597 SIPPLDVTLDDIEHSDMENFISENQENNEVTAIDEKSKRQAKKKAKEERESEIRAAEERQ 1656

Query: 1515 LQNDMPRTEDEFEKLVRRSPNSSFVWIKYMAYMLSLADVEKARSTAERALRTINIREEAE 1694
            L+ D+PRT DEFEKLVR SPNSSFVWIKYMA+ML+ A++EKAR+ AERALRTINIREE E
Sbjct: 1657 LEKDVPRTTDEFEKLVRSSPNSSFVWIKYMAFMLNSANIEKARAIAERALRTINIREETE 1716

Query: 1695 KLNIWVAYFNLENEYGSPPEEAVKKLFQRALQYCDPKKLHLALLGVYERTEQYNLVDELT 1874
            KLNIWVAYFNLEN+YG+PPEEAV+K+FQRALQYCDPKK+H ALLG+YERTEQ+ L +EL 
Sbjct: 1717 KLNIWVAYFNLENQYGNPPEEAVQKVFQRALQYCDPKKVHFALLGMYERTEQHKLAEELL 1776

Query: 1875 ERMTKKFKHSCKVWLRCIQNFLKKNKDGIQSIINRALLSLPHKKHIKFISQTALLEFKIG 2054
            ++M+KKFKHSCKVWLR +Q  L + +DG+Q ++NRALL LP  KH+KFISQ A+LEFK G
Sbjct: 1777 DKMSKKFKHSCKVWLRRVQVLLTQQQDGVQPVVNRALLCLPRHKHVKFISQAAILEFKSG 1836

Query: 2055 SAERGRSMFESILREYPKRTDLWSIYLDREIRLGDAEVIRALFERATCLGXXXXXXXXXX 2234
              +RGRSMFE +LREYPKRTDLWSIYLD+EIRLGD +VIRALFERA  L           
Sbjct: 1837 VPDRGRSMFEGVLREYPKRTDLWSIYLDQEIRLGDEDVIRALFERAISLSLPPKKMKFLF 1896

Query: 2235 XXYLDYEKAHGNEDTIEHVKRKAMEYVENTL 2327
              YLDYEK+ G+E+ IE VKRKAM+YVE+TL
Sbjct: 1897 KKYLDYEKSRGDEERIESVKRKAMDYVESTL 1927



 Score = 68.6 bits (166), Expect = 7e-08
 Identities = 81/326 (24%), Positives = 139/326 (42%), Gaps = 32/326 (9%)
 Frame = +3

Query: 213  QQRYVVGQAVKGRILNINAEKKLLRL----------TSYSSSMHADQQ--FSQGDIVAGR 356
            Q+++V GQ V   ++ + + +   RL          T  SSS  A ++  ++ G +V   
Sbjct: 1007 QKQFVNGQRVIATVMALPSPETSGRLLLLLNSIGEVTETSSSKRAKKKSSYNVGSLVPAE 1066

Query: 357  IKKIFAGVGGLLVQIGPHLCGRVHYTEVVDEWV-PYPLRGYQEGQFVKCKILDISHSSEG 533
            + +I      L ++ G   CGRVH TEV D  V   P   ++ GQ +  +I+    + +G
Sbjct: 1067 VTEIMPLE--LRLKFGIGFCGRVHITEVNDNNVLEKPFGNFKVGQTITARIVG-KPNQKG 1123

Query: 534  ILHIDLSLRAXXXXXXXXXXXXXXXRRYEKVDDLQPSMNVQGYVKNISTKGCFILLSRVL 713
             L  DLS++                  +    D      V GYV  + ++  ++ +SR +
Sbjct: 1124 HLW-DLSIKPAMLADTGEIGVKTTLEEF----DFSTGQLVTGYVYKVDSEWAWLTISRHV 1178

Query: 714  DARILI--SNLSDGYIDDPEKEFPVGKLVHAKLLSVEASSKRVE---------ATLRTG- 857
             AR+ I  S      +   ++ F VGK V   +L+V    K +          +T   G 
Sbjct: 1179 KARLFILDSGCEPNELQQFQERFKVGKPVSGHILNVNKDKKLIRIVRHPLGALSTTNVGD 1238

Query: 858  -----SEADNAKSSQASFKNLYVGDIITGQIRRI--ETYGLFITIDKANVVGLCHTSELS 1016
                  E+DN  S  +   +++ GDI+ G+I +I     GL + I   N  G  H +EL 
Sbjct: 1239 EDKRKGESDNNISDDSVIAHIHEGDILGGRISKILPGIGGLVVQIGPNN-YGRVHFTELK 1297

Query: 1017 DDHIDNLEANYKTGDKVLAKILKIDN 1094
            D    +  + Y  G  V  K+L++ +
Sbjct: 1298 DAWESDPLSGYHEGQFVKCKVLEVSH 1323


>ref|XP_016671446.1| PREDICTED: rRNA biogenesis protein RRP5-like isoform X1 [Gossypium
            hirsutum]
          Length = 1923

 Score =  786 bits (2030), Expect = 0.0
 Identities = 416/808 (51%), Positives = 532/808 (65%), Gaps = 33/808 (4%)
 Frame = +3

Query: 3    LSIKPSILSGSEEILTSCASEPLTFSXXXXXXXXXXXXXSEWVWLSVSRSVMAHMYILDS 182
            LSIKP++L+ + EI      E   FS             SEW WL++SR V A ++ILDS
Sbjct: 1128 LSIKPAMLADTGEIGVKTTLEEFDFSTGQLVTGYVYKVDSEWGWLTISRHVKARLFILDS 1187

Query: 183  SCDPDELEKFQQRYVVGQAVKGRILNINAEKKLLRLTSY-------------------SS 305
             C+P+EL++FQ+R+ VG+ V G ILN+N +KKLLR+  +                   S 
Sbjct: 1188 GCEPNELQQFQERFKVGKPVSGHILNVNKDKKLLRIVRHPLGALSTTNVGDEDKRKGESD 1247

Query: 306  SMHADQQFS---QGDIVAGRIKKIFAGVGGLLVQIGPHLCGRVHYTEVVDEWVPYPLRGY 476
            ++  D   +   +GDI+ GRI KI  G+GGL+VQIGP+  GRVH+TE+ D W   PL GY
Sbjct: 1248 NISDDSVIAHIHEGDILGGRISKILPGIGGLVVQIGPNNYGRVHFTELKDAWESDPLSGY 1307

Query: 477  QEGQFVKCKILDISHSSEGILHIDLSLRAXXXXXXXXXXXXXXX------RRYEKVDDLQ 638
             EGQFVKCK+L++SHS++G +HIDLSLR                      +R EKV+DL 
Sbjct: 1308 HEGQFVKCKVLEVSHSTKGTIHIDLSLRLSLDGMISKNPLELASDADSTSKRAEKVEDLY 1367

Query: 639  PSMNVQGYVKNISTKGCFILLSRVLDARILISNLSDGYIDDPEKEFPVGKLVHAKLLSVE 818
            P+M VQGYVKN+  KGCFI+LSR +DA+IL+SNLS+GY++DP+KEFP+GKLV  ++L+VE
Sbjct: 1368 PNMAVQGYVKNVIPKGCFIMLSRKVDAKILLSNLSNGYVNDPKKEFPIGKLVSGRVLAVE 1427

Query: 819  ASSKRVEATLRTGSEADNAKSSQASFKNLYVGDIITGQIRRIETYGLFITIDKANVVGLC 998
              SKRVE TL+       +KS    F  L+VGDI++G+IRR+E+YGLFIT+D  N+VGLC
Sbjct: 1428 PLSKRVEVTLKNSDTNGTSKSEINDFSRLHVGDIVSGRIRRVESYGLFITLDHTNMVGLC 1487

Query: 999  HTSELSDDHIDNLEANYKTGDKVLAKILKIDNERMRVSLGMKKSYVDDAGS---VEQNCX 1169
            H SEL+DDHI+N++ NY  G+KV AKILK+D ER R+SLGMK SY  D       EQ   
Sbjct: 1488 HFSELADDHIENIQTNYAAGEKVKAKILKLDEERHRISLGMKNSYFTDDIDFQITEQEES 1547

Query: 1170 XXXXXXXXXXXXXGASSL--DDTFLDLQHKDDLTKCKMMYNSDIGGSEILVQPGRTTCVL 1343
                           S L  D T +D++++              G S++L Q      + 
Sbjct: 1548 DEDIEETGVADDEARSILLTDRTGMDIEYRS-------------GVSDVLAQAESRASIP 1594

Query: 1344 PLQXXXXXXXXXXXXNPVSANQDDAKVSEQXXXXXXXXXXXXXXXXXXXXXXXXXRHLQN 1523
            PL             N +S NQ++ +V+                           R L+ 
Sbjct: 1595 PLDVTLDDIEHSDMENFISENQENNEVTAIDETSKRQAKKKAKEERESEIRAAEERQLEK 1654

Query: 1524 DMPRTEDEFEKLVRRSPNSSFVWIKYMAYMLSLADVEKARSTAERALRTINIREEAEKLN 1703
            D+PRT DEFEKLVR SPNSSFVWIKYMA+ML+ A++EKAR+ AERALRTINIREE EKLN
Sbjct: 1655 DVPRTTDEFEKLVRSSPNSSFVWIKYMAFMLNSANIEKARAIAERALRTINIREETEKLN 1714

Query: 1704 IWVAYFNLENEYGSPPEEAVKKLFQRALQYCDPKKLHLALLGVYERTEQYNLVDELTERM 1883
            IWVAYFNLEN+YG+PPEEAV+K+FQRALQYCDPKK+H ALLG+YERTEQ+ L +EL ++M
Sbjct: 1715 IWVAYFNLENQYGNPPEEAVQKVFQRALQYCDPKKVHFALLGMYERTEQHKLAEELLDKM 1774

Query: 1884 TKKFKHSCKVWLRCIQNFLKKNKDGIQSIINRALLSLPHKKHIKFISQTALLEFKIGSAE 2063
            +KKFKHSCKVWLR +Q  L + +DG+Q ++NRALL LP  KH+KFISQ A+LEFK G  +
Sbjct: 1775 SKKFKHSCKVWLRRVQVLLTQQQDGVQPVVNRALLCLPRHKHVKFISQAAILEFKSGVPD 1834

Query: 2064 RGRSMFESILREYPKRTDLWSIYLDREIRLGDAEVIRALFERATCLGXXXXXXXXXXXXY 2243
            RGRSMFE +LREYPKRTDLWSIYLD+EIRLGD +VIRALFERA  L             Y
Sbjct: 1835 RGRSMFEGVLREYPKRTDLWSIYLDQEIRLGDEDVIRALFERAISLSLPPKKMKFLFKKY 1894

Query: 2244 LDYEKAHGNEDTIEHVKRKAMEYVENTL 2327
            LDYEK+ G+E+ IE VKRKAM+YVE+TL
Sbjct: 1895 LDYEKSRGDEERIESVKRKAMDYVESTL 1922



 Score = 63.5 bits (153), Expect = 2e-06
 Identities = 81/326 (24%), Positives = 139/326 (42%), Gaps = 32/326 (9%)
 Frame = +3

Query: 213  QQRYVVGQAVKGRILNINAEKKLLRL----------TSYSSSMHADQQ--FSQGDIVAGR 356
            Q+++V GQ V   ++ + + +   RL          T  SSS  A ++  ++ G +V   
Sbjct: 1007 QKQFVNGQRVIATVMALPSPETSGRLLLLLNSIGEVTETSSSKRAKKKSSYNVGSLVPAE 1066

Query: 357  IKKIFAGVGGLLVQIGPHLCGRVHYTEVVDEWV-PYPLRGYQEGQFVKCKILDISHSSEG 533
            + +I      L ++ G   CGRVH TEV D  V   P   ++ GQ +  +I+    + +G
Sbjct: 1067 VTEIMPLE--LRLKFGIGFCGRVHITEVNDNNVLEKPFGNFKVGQTITARIVG-KPNQKG 1123

Query: 534  ILHIDLSLRAXXXXXXXXXXXXXXXRRYEKVDDLQPSMNVQGYVKNISTKGCFILLSRVL 713
             L  DLS++                  +    D      V GYV  + ++  ++ +SR +
Sbjct: 1124 HLW-DLSIKPAMLADTGEIGVKTTLEEF----DFSTGQLVTGYVYKVDSEWGWLTISRHV 1178

Query: 714  DARILI--SNLSDGYIDDPEKEFPVGKLVHAKLLSVEASSKRVE---------ATLRTG- 857
             AR+ I  S      +   ++ F VGK V   +L+V    K +          +T   G 
Sbjct: 1179 KARLFILDSGCEPNELQQFQERFKVGKPVSGHILNVNKDKKLLRIVRHPLGALSTTNVGD 1238

Query: 858  -----SEADNAKSSQASFKNLYVGDIITGQIRRI--ETYGLFITIDKANVVGLCHTSELS 1016
                  E+DN  S  +   +++ GDI+ G+I +I     GL + I   N  G  H +EL 
Sbjct: 1239 EDKRKGESDNI-SDDSVIAHIHEGDILGGRISKILPGIGGLVVQIGPNN-YGRVHFTELK 1296

Query: 1017 DDHIDNLEANYKTGDKVLAKILKIDN 1094
            D    +  + Y  G  V  K+L++ +
Sbjct: 1297 DAWESDPLSGYHEGQFVKCKVLEVSH 1322


>gb|KHF99545.1| Protein RRP5 [Gossypium arboreum]
          Length = 1870

 Score =  784 bits (2024), Expect = 0.0
 Identities = 414/811 (51%), Positives = 535/811 (65%), Gaps = 36/811 (4%)
 Frame = +3

Query: 3    LSIKPSILSGSEEILTSCASEPLTFSXXXXXXXXXXXXXSEWVWLSVSRSVMAHMYILDS 182
            LSIKP++L+ + EI    A E   FS             SEW WL++SR V A ++ILD+
Sbjct: 1070 LSIKPAMLADAGEIGVKTALEEFDFSTGQLVTGYVYKVDSEWAWLTISRHVKARLFILDT 1129

Query: 183  SCDPDELEKFQQRYVVGQAVKGRILNINAEKKLLRLTSY-------------------SS 305
             C+P+EL++FQ+R+ VG+ V G ILN+N +KKLL++  +                   S 
Sbjct: 1130 GCEPNELQQFQERFKVGKPVSGHILNVNKDKKLLQIVRHPLGALSTRNVGDEDKRKGESG 1189

Query: 306  SMHADQQFS----QGDIVAGRIKKIFAGVGGLLVQIGPHLCGRVHYTEVVDEWVPYPLRG 473
            +  +D+  +    +GDI+ GRI KI  G+GGL+VQIGP+  GRVH+TE+ D W   PL G
Sbjct: 1190 NNISDESVTAHIHEGDILGGRISKILPGIGGLVVQIGPNNYGRVHFTELKDAWESDPLSG 1249

Query: 474  YQEGQFVKCKILDISHSSEGILHIDLSLRAXXXXXXXXXXXXXXX------RRYEKVDDL 635
            Y EGQFVKCK+L++SHS++G +HIDLSLR                      +R EKV+DL
Sbjct: 1250 YHEGQFVKCKVLEVSHSTKGTIHIDLSLRLSLDGLIPKNPLELASDVDSTSKRAEKVEDL 1309

Query: 636  QPSMNVQGYVKNISTKGCFILLSRVLDARILISNLSDGYIDDPEKEFPVGKLVHAKLLSV 815
             P+M VQGYVKN+  KGCFI+LSR +DA+IL+SNLS+GY++DP+KEFP+GKLV  ++L+V
Sbjct: 1310 YPNMAVQGYVKNVIPKGCFIMLSRKVDAKILMSNLSNGYVNDPKKEFPIGKLVSGRVLAV 1369

Query: 816  EASSKRVEATLRTGSEADNAKSSQASFKNLYVGDIITGQIRRIETYGLFITIDKANVVGL 995
            E  SKRVE TL+       +KS    F  L+VGDI++G+IRR+E+YGLFIT+D  N+VGL
Sbjct: 1370 EPLSKRVEVTLKNSDTKGTSKSEINDFSRLHVGDIVSGRIRRVESYGLFITLDHTNMVGL 1429

Query: 996  CHTSELSDDHIDNLEANYKTGDKVLAKILKIDNERMRVSLGMKKSYVDDAGSVEQNCXXX 1175
            CH SELSDDHI+N++ NY  G+KV AKILK+D ER R+SLGMK SY  D           
Sbjct: 1430 CHFSELSDDHIENIQTNYAAGEKVKAKILKLDEERHRISLGMKNSYFTD----------- 1478

Query: 1176 XXXXXXXXXXXGASSLDDTFLDLQHKDDLTKCKMMYNS---DI----GGSEILVQPGRTT 1334
                           +++T +     DD  +  ++ +S   DI    G S++L Q     
Sbjct: 1479 DIDFQITEQEESDEDIEETGVADDDADDEARSILLTDSTGMDIEYGSGVSDVLAQAESRA 1538

Query: 1335 CVLPLQXXXXXXXXXXXXNPVSANQDDAKVSEQXXXXXXXXXXXXXXXXXXXXXXXXXRH 1514
             + PL             N +S NQ++ +V+                           R 
Sbjct: 1539 SIPPLDVTLDDIEHSDMENFISQNQENNEVTAVDEKSKRRAKKKAKEEREREIRAAEERQ 1598

Query: 1515 LQNDMPRTEDEFEKLVRRSPNSSFVWIKYMAYMLSLADVEKARSTAERALRTINIREEAE 1694
            L+ D+PRT DEFEKLVR SPNSSFVWIKYMA+ML+ AD+EKAR+ AERALRTINIREE E
Sbjct: 1599 LEKDIPRTTDEFEKLVRSSPNSSFVWIKYMAFMLNSADIEKARAIAERALRTINIREETE 1658

Query: 1695 KLNIWVAYFNLENEYGSPPEEAVKKLFQRALQYCDPKKLHLALLGVYERTEQYNLVDELT 1874
            KLNIWVAYFNLEN+YG+PPEEAV+K+FQRALQYCDPKK+H ALLG+YERTEQ+ L +EL 
Sbjct: 1659 KLNIWVAYFNLENQYGNPPEEAVQKVFQRALQYCDPKKVHFALLGMYERTEQHKLAEELL 1718

Query: 1875 ERMTKKFKHSCKVWLRCIQNFLKKNKDGIQSIINRALLSLPHKKHIKFISQTALLEFKIG 2054
            ++M+KKFKHSCK+WLR +Q  L + +D +Q ++NRALL LPH KH+KFISQ A+LEFK G
Sbjct: 1719 DKMSKKFKHSCKLWLRRVQMLLMQQQDRVQPVVNRALLCLPHHKHVKFISQAAILEFKSG 1778

Query: 2055 SAERGRSMFESILREYPKRTDLWSIYLDREIRLGDAEVIRALFERATCLGXXXXXXXXXX 2234
              +RGRSMFE +LREYPKRTDLWSIYLD+EIRLGD +VIRALFERA  L           
Sbjct: 1779 VPDRGRSMFEGVLREYPKRTDLWSIYLDQEIRLGDEDVIRALFERAISLSLPPKKMKFLF 1838

Query: 2235 XXYLDYEKAHGNEDTIEHVKRKAMEYVENTL 2327
              YL+YEK+ G+E  IE VKRKAM+YVE+TL
Sbjct: 1839 KKYLNYEKSCGDEARIESVKRKAMDYVESTL 1869



 Score = 62.4 bits (150), Expect = 6e-06
 Identities = 76/326 (23%), Positives = 136/326 (41%), Gaps = 32/326 (9%)
 Frame = +3

Query: 213  QQRYVVGQAVKGRILNINAEKKLLRL------------TSYSSSMHADQQFSQGDIVAGR 356
            Q++++ GQ V   ++ + + +   RL            TS S        ++ G +V   
Sbjct: 949  QKQFLNGQRVIATVMALPSPETSGRLLLLLNSIGEVTETSCSKRAKKKSSYNVGSLVPAE 1008

Query: 357  IKKIFAGVGGLLVQIGPHLCGRVHYTEVVDEWV-PYPLRGYQEGQFVKCKILDISHSSEG 533
            + +I      L ++ G   CGRVH TEV D  V   P   ++ GQ +  +I+    + +G
Sbjct: 1009 VTEIMPLE--LRLKFGIGFCGRVHITEVNDNNVLEKPFGNFKVGQTITARIVG-KPNQKG 1065

Query: 534  ILHIDLSLRAXXXXXXXXXXXXXXXRRYEKVDDLQPSMNVQGYVKNISTKGCFILLSRVL 713
             L  DLS++                  +    D      V GYV  + ++  ++ +SR +
Sbjct: 1066 HLW-DLSIKPAMLADAGEIGVKTALEEF----DFSTGQLVTGYVYKVDSEWAWLTISRHV 1120

Query: 714  DARILI--SNLSDGYIDDPEKEFPVGKLVHAKLLSVEASSKRVE---------ATLRTG- 857
             AR+ I  +      +   ++ F VGK V   +L+V    K ++         +T   G 
Sbjct: 1121 KARLFILDTGCEPNELQQFQERFKVGKPVSGHILNVNKDKKLLQIVRHPLGALSTRNVGD 1180

Query: 858  -----SEADNAKSSQASFKNLYVGDIITGQIRRI--ETYGLFITIDKANVVGLCHTSELS 1016
                  E+ N  S ++   +++ GDI+ G+I +I     GL + I   N  G  H +EL 
Sbjct: 1181 EDKRKGESGNNISDESVTAHIHEGDILGGRISKILPGIGGLVVQIGPNN-YGRVHFTELK 1239

Query: 1017 DDHIDNLEANYKTGDKVLAKILKIDN 1094
            D    +  + Y  G  V  K+L++ +
Sbjct: 1240 DAWESDPLSGYHEGQFVKCKVLEVSH 1265


>ref|XP_017610800.1| PREDICTED: rRNA biogenesis protein RRP5 [Gossypium arboreum]
          Length = 1928

 Score =  784 bits (2024), Expect = 0.0
 Identities = 414/811 (51%), Positives = 535/811 (65%), Gaps = 36/811 (4%)
 Frame = +3

Query: 3    LSIKPSILSGSEEILTSCASEPLTFSXXXXXXXXXXXXXSEWVWLSVSRSVMAHMYILDS 182
            LSIKP++L+ + EI    A E   FS             SEW WL++SR V A ++ILD+
Sbjct: 1128 LSIKPAMLADAGEIGVKTALEEFDFSTGQLVTGYVYKVDSEWAWLTISRHVKARLFILDT 1187

Query: 183  SCDPDELEKFQQRYVVGQAVKGRILNINAEKKLLRLTSY-------------------SS 305
             C+P+EL++FQ+R+ VG+ V G ILN+N +KKLL++  +                   S 
Sbjct: 1188 GCEPNELQQFQERFKVGKPVSGHILNVNKDKKLLQIVRHPLGALSTRNVGDEDKRKGESG 1247

Query: 306  SMHADQQFS----QGDIVAGRIKKIFAGVGGLLVQIGPHLCGRVHYTEVVDEWVPYPLRG 473
            +  +D+  +    +GDI+ GRI KI  G+GGL+VQIGP+  GRVH+TE+ D W   PL G
Sbjct: 1248 NNISDESVTAHIHEGDILGGRISKILPGIGGLVVQIGPNNYGRVHFTELKDAWESDPLSG 1307

Query: 474  YQEGQFVKCKILDISHSSEGILHIDLSLRAXXXXXXXXXXXXXXX------RRYEKVDDL 635
            Y EGQFVKCK+L++SHS++G +HIDLSLR                      +R EKV+DL
Sbjct: 1308 YHEGQFVKCKVLEVSHSTKGTIHIDLSLRLSLDGLIPKNPLELASDVDSTSKRAEKVEDL 1367

Query: 636  QPSMNVQGYVKNISTKGCFILLSRVLDARILISNLSDGYIDDPEKEFPVGKLVHAKLLSV 815
             P+M VQGYVKN+  KGCFI+LSR +DA+IL+SNLS+GY++DP+KEFP+GKLV  ++L+V
Sbjct: 1368 YPNMAVQGYVKNVIPKGCFIMLSRKVDAKILMSNLSNGYVNDPKKEFPIGKLVSGRVLAV 1427

Query: 816  EASSKRVEATLRTGSEADNAKSSQASFKNLYVGDIITGQIRRIETYGLFITIDKANVVGL 995
            E  SKRVE TL+       +KS    F  L+VGDI++G+IRR+E+YGLFIT+D  N+VGL
Sbjct: 1428 EPLSKRVEVTLKNSDTKGTSKSEINDFSRLHVGDIVSGRIRRVESYGLFITLDHTNMVGL 1487

Query: 996  CHTSELSDDHIDNLEANYKTGDKVLAKILKIDNERMRVSLGMKKSYVDDAGSVEQNCXXX 1175
            CH SELSDDHI+N++ NY  G+KV AKILK+D ER R+SLGMK SY  D           
Sbjct: 1488 CHFSELSDDHIENIQTNYAAGEKVKAKILKLDEERHRISLGMKNSYFTD----------- 1536

Query: 1176 XXXXXXXXXXXGASSLDDTFLDLQHKDDLTKCKMMYNS---DI----GGSEILVQPGRTT 1334
                           +++T +     DD  +  ++ +S   DI    G S++L Q     
Sbjct: 1537 DIDFQITEQEESDEDIEETGVADDDADDEARSILLTDSTGMDIEYGSGVSDVLAQAESRA 1596

Query: 1335 CVLPLQXXXXXXXXXXXXNPVSANQDDAKVSEQXXXXXXXXXXXXXXXXXXXXXXXXXRH 1514
             + PL             N +S NQ++ +V+                           R 
Sbjct: 1597 SIPPLDVTLDDIEHSDMENFISQNQENNEVTAVDEKSKRRAKKKAKEEREREIRAAEERQ 1656

Query: 1515 LQNDMPRTEDEFEKLVRRSPNSSFVWIKYMAYMLSLADVEKARSTAERALRTINIREEAE 1694
            L+ D+PRT DEFEKLVR SPNSSFVWIKYMA+ML+ AD+EKAR+ AERALRTINIREE E
Sbjct: 1657 LEKDIPRTTDEFEKLVRSSPNSSFVWIKYMAFMLNSADIEKARAIAERALRTINIREETE 1716

Query: 1695 KLNIWVAYFNLENEYGSPPEEAVKKLFQRALQYCDPKKLHLALLGVYERTEQYNLVDELT 1874
            KLNIWVAYFNLEN+YG+PPEEAV+K+FQRALQYCDPKK+H ALLG+YERTEQ+ L +EL 
Sbjct: 1717 KLNIWVAYFNLENQYGNPPEEAVQKVFQRALQYCDPKKVHFALLGMYERTEQHKLAEELL 1776

Query: 1875 ERMTKKFKHSCKVWLRCIQNFLKKNKDGIQSIINRALLSLPHKKHIKFISQTALLEFKIG 2054
            ++M+KKFKHSCK+WLR +Q  L + +D +Q ++NRALL LPH KH+KFISQ A+LEFK G
Sbjct: 1777 DKMSKKFKHSCKLWLRRVQMLLMQQQDRVQPVVNRALLCLPHHKHVKFISQAAILEFKSG 1836

Query: 2055 SAERGRSMFESILREYPKRTDLWSIYLDREIRLGDAEVIRALFERATCLGXXXXXXXXXX 2234
              +RGRSMFE +LREYPKRTDLWSIYLD+EIRLGD +VIRALFERA  L           
Sbjct: 1837 VPDRGRSMFEGVLREYPKRTDLWSIYLDQEIRLGDEDVIRALFERAISLSLPPKKMKFLF 1896

Query: 2235 XXYLDYEKAHGNEDTIEHVKRKAMEYVENTL 2327
              YL+YEK+ G+E  IE VKRKAM+YVE+TL
Sbjct: 1897 KKYLNYEKSCGDEARIESVKRKAMDYVESTL 1927



 Score = 62.4 bits (150), Expect = 6e-06
 Identities = 76/326 (23%), Positives = 136/326 (41%), Gaps = 32/326 (9%)
 Frame = +3

Query: 213  QQRYVVGQAVKGRILNINAEKKLLRL------------TSYSSSMHADQQFSQGDIVAGR 356
            Q++++ GQ V   ++ + + +   RL            TS S        ++ G +V   
Sbjct: 1007 QKQFLNGQRVIATVMALPSPETSGRLLLLLNSIGEVTETSCSKRAKKKSSYNVGSLVPAE 1066

Query: 357  IKKIFAGVGGLLVQIGPHLCGRVHYTEVVDEWV-PYPLRGYQEGQFVKCKILDISHSSEG 533
            + +I      L ++ G   CGRVH TEV D  V   P   ++ GQ +  +I+    + +G
Sbjct: 1067 VTEIMPLE--LRLKFGIGFCGRVHITEVNDNNVLEKPFGNFKVGQTITARIVG-KPNQKG 1123

Query: 534  ILHIDLSLRAXXXXXXXXXXXXXXXRRYEKVDDLQPSMNVQGYVKNISTKGCFILLSRVL 713
             L  DLS++                  +    D      V GYV  + ++  ++ +SR +
Sbjct: 1124 HLW-DLSIKPAMLADAGEIGVKTALEEF----DFSTGQLVTGYVYKVDSEWAWLTISRHV 1178

Query: 714  DARILI--SNLSDGYIDDPEKEFPVGKLVHAKLLSVEASSKRVE---------ATLRTG- 857
             AR+ I  +      +   ++ F VGK V   +L+V    K ++         +T   G 
Sbjct: 1179 KARLFILDTGCEPNELQQFQERFKVGKPVSGHILNVNKDKKLLQIVRHPLGALSTRNVGD 1238

Query: 858  -----SEADNAKSSQASFKNLYVGDIITGQIRRI--ETYGLFITIDKANVVGLCHTSELS 1016
                  E+ N  S ++   +++ GDI+ G+I +I     GL + I   N  G  H +EL 
Sbjct: 1239 EDKRKGESGNNISDESVTAHIHEGDILGGRISKILPGIGGLVVQIGPNN-YGRVHFTELK 1297

Query: 1017 DDHIDNLEANYKTGDKVLAKILKIDN 1094
            D    +  + Y  G  V  K+L++ +
Sbjct: 1298 DAWESDPLSGYHEGQFVKCKVLEVSH 1323


>ref|XP_016669405.1| PREDICTED: rRNA biogenesis protein RRP5-like isoform X4 [Gossypium
            hirsutum]
          Length = 1893

 Score =  780 bits (2015), Expect = 0.0
 Identities = 416/805 (51%), Positives = 530/805 (65%), Gaps = 30/805 (3%)
 Frame = +3

Query: 3    LSIKPSILSGSEEILTSCASEPLTFSXXXXXXXXXXXXXSEWVWLSVSRSVMAHMYILDS 182
            LSIKPS+L+ + EI    A E   FS             SEW WL++SR V A ++ILD+
Sbjct: 1093 LSIKPSMLADAVEIGVKTALEEFDFSTGQLVTGYVYKVDSEWAWLTISRHVKARLFILDT 1152

Query: 183  SCDPDELEKFQQRYVVGQAVKGRILNINAEKKLLRLTSY-------------------SS 305
             C+P+EL++FQ+ + VG+ V G ILN+N +KKLLR+  +                   S 
Sbjct: 1153 GCEPNELQQFQECFKVGKPVSGHILNVNKDKKLLRIVRHPLGALSTRNVGDEDKRKGESG 1212

Query: 306  SMHADQQFS----QGDIVAGRIKKIFAGVGGLLVQIGPHLCGRVHYTEVVDEWVPYPLRG 473
            +  +D+  +    +GDI+ GRI KI  G+GGL+VQIGP+  GRVH+TE+ D W   PL G
Sbjct: 1213 NNISDESVTAHIHEGDILGGRISKILPGIGGLVVQIGPNNYGRVHFTELKDAWESDPLSG 1272

Query: 474  YQEGQFVKCKILDISHSSEGILHIDLSLRAXXXXXXXXXXXXXXX------RRYEKVDDL 635
            Y EGQFVKCK+L++SHS++G +HIDLSLR                      +R EKV+DL
Sbjct: 1273 YHEGQFVKCKVLEVSHSTKGTIHIDLSLRLSLDGMIPKNPLELASDVDSTSKRAEKVEDL 1332

Query: 636  QPSMNVQGYVKNISTKGCFILLSRVLDARILISNLSDGYIDDPEKEFPVGKLVHAKLLSV 815
             P+M VQGYVKN+  KGCFI+LSR +DA+IL+SNLS+GY++DP+KEFP+GKLV  ++L+V
Sbjct: 1333 YPNMAVQGYVKNVIPKGCFIMLSRKVDAKILLSNLSNGYVNDPKKEFPIGKLVSGRVLAV 1392

Query: 816  EASSKRVEATLRTGSEADNAKSSQASFKNLYVGDIITGQIRRIETYGLFITIDKANVVGL 995
            E  SKRVE TL+       +KS    F  L+VGDI++G+IRR+E+YGLFIT+D  N+VGL
Sbjct: 1393 EPLSKRVEVTLKNSDTKGTSKSEINDFSRLHVGDIVSGRIRRVESYGLFITLDHTNMVGL 1452

Query: 996  CHTSELSDDHIDNLEANYKTGDKVLAKILKIDNERMRVSLGMKKSY-VDDAGSVEQNCXX 1172
            CH SELSDDHI+N++ NY  G+KV AKILK+D ER R+SLGMK SY  DD  S  Q    
Sbjct: 1453 CHFSELSDDHIENIQTNYAAGEKVKAKILKLDEERHRISLGMKNSYFTDDIDS--QITEQ 1510

Query: 1173 XXXXXXXXXXXXGASSLDDTFLDLQHKDDLTKCKMMYNSDIGGSEILVQPGRTTCVLPLQ 1352
                             DD    +   D  T   + Y S  G S++L Q      + PL 
Sbjct: 1511 EESDEDIEETGVADDDADDEARSILLTDS-TGMDIKYGS--GVSDVLAQAESRASIPPLD 1567

Query: 1353 XXXXXXXXXXXXNPVSANQDDAKVSEQXXXXXXXXXXXXXXXXXXXXXXXXXRHLQNDMP 1532
                        N +S NQ++ +V+                           R L+ D+P
Sbjct: 1568 VTLDDIEHSDMENFISQNQENNEVTGVDEKSKRRAKKKAKEEREREIRAAEERQLEKDVP 1627

Query: 1533 RTEDEFEKLVRRSPNSSFVWIKYMAYMLSLADVEKARSTAERALRTINIREEAEKLNIWV 1712
            RT DEFEKLVR SPNSSFVWIKYMA+ML+ AD+EKAR+ AERALRTINIREE EKLNIWV
Sbjct: 1628 RTTDEFEKLVRSSPNSSFVWIKYMAFMLNSADIEKARAIAERALRTINIREETEKLNIWV 1687

Query: 1713 AYFNLENEYGSPPEEAVKKLFQRALQYCDPKKLHLALLGVYERTEQYNLVDELTERMTKK 1892
            AYFNLEN+YG+PPEEAV+K+FQRALQYCDPKK+H ALLG+YERTEQ+ L +EL ++M+KK
Sbjct: 1688 AYFNLENQYGNPPEEAVQKVFQRALQYCDPKKVHFALLGMYERTEQHKLAEELLDKMSKK 1747

Query: 1893 FKHSCKVWLRCIQNFLKKNKDGIQSIINRALLSLPHKKHIKFISQTALLEFKIGSAERGR 2072
            FKHSCK+WLR +Q  L + +D +Q ++NRALL LP  KH+KFISQ A+LEFK G  +RGR
Sbjct: 1748 FKHSCKLWLRRVQMLLMQQQDRVQPVVNRALLCLPRHKHVKFISQAAILEFKSGVPDRGR 1807

Query: 2073 SMFESILREYPKRTDLWSIYLDREIRLGDAEVIRALFERATCLGXXXXXXXXXXXXYLDY 2252
            SMFE +LREYPKRTDLWSIYLD+EIRLGD +VIRALFERA  L             YL+Y
Sbjct: 1808 SMFEGVLREYPKRTDLWSIYLDQEIRLGDEDVIRALFERAISLSLPPKKMKFLFKKYLNY 1867

Query: 2253 EKAHGNEDTIEHVKRKAMEYVENTL 2327
            EK+ G+E  IE VK+KAM+YVE+TL
Sbjct: 1868 EKSCGDEARIESVKQKAMDYVESTL 1892


>ref|XP_016669404.1| PREDICTED: rRNA biogenesis protein RRP5-like isoform X3 [Gossypium
            hirsutum]
          Length = 1920

 Score =  780 bits (2015), Expect = 0.0
 Identities = 416/805 (51%), Positives = 530/805 (65%), Gaps = 30/805 (3%)
 Frame = +3

Query: 3    LSIKPSILSGSEEILTSCASEPLTFSXXXXXXXXXXXXXSEWVWLSVSRSVMAHMYILDS 182
            LSIKPS+L+ + EI    A E   FS             SEW WL++SR V A ++ILD+
Sbjct: 1120 LSIKPSMLADAVEIGVKTALEEFDFSTGQLVTGYVYKVDSEWAWLTISRHVKARLFILDT 1179

Query: 183  SCDPDELEKFQQRYVVGQAVKGRILNINAEKKLLRLTSY-------------------SS 305
             C+P+EL++FQ+ + VG+ V G ILN+N +KKLLR+  +                   S 
Sbjct: 1180 GCEPNELQQFQECFKVGKPVSGHILNVNKDKKLLRIVRHPLGALSTRNVGDEDKRKGESG 1239

Query: 306  SMHADQQFS----QGDIVAGRIKKIFAGVGGLLVQIGPHLCGRVHYTEVVDEWVPYPLRG 473
            +  +D+  +    +GDI+ GRI KI  G+GGL+VQIGP+  GRVH+TE+ D W   PL G
Sbjct: 1240 NNISDESVTAHIHEGDILGGRISKILPGIGGLVVQIGPNNYGRVHFTELKDAWESDPLSG 1299

Query: 474  YQEGQFVKCKILDISHSSEGILHIDLSLRAXXXXXXXXXXXXXXX------RRYEKVDDL 635
            Y EGQFVKCK+L++SHS++G +HIDLSLR                      +R EKV+DL
Sbjct: 1300 YHEGQFVKCKVLEVSHSTKGTIHIDLSLRLSLDGMIPKNPLELASDVDSTSKRAEKVEDL 1359

Query: 636  QPSMNVQGYVKNISTKGCFILLSRVLDARILISNLSDGYIDDPEKEFPVGKLVHAKLLSV 815
             P+M VQGYVKN+  KGCFI+LSR +DA+IL+SNLS+GY++DP+KEFP+GKLV  ++L+V
Sbjct: 1360 YPNMAVQGYVKNVIPKGCFIMLSRKVDAKILLSNLSNGYVNDPKKEFPIGKLVSGRVLAV 1419

Query: 816  EASSKRVEATLRTGSEADNAKSSQASFKNLYVGDIITGQIRRIETYGLFITIDKANVVGL 995
            E  SKRVE TL+       +KS    F  L+VGDI++G+IRR+E+YGLFIT+D  N+VGL
Sbjct: 1420 EPLSKRVEVTLKNSDTKGTSKSEINDFSRLHVGDIVSGRIRRVESYGLFITLDHTNMVGL 1479

Query: 996  CHTSELSDDHIDNLEANYKTGDKVLAKILKIDNERMRVSLGMKKSY-VDDAGSVEQNCXX 1172
            CH SELSDDHI+N++ NY  G+KV AKILK+D ER R+SLGMK SY  DD  S  Q    
Sbjct: 1480 CHFSELSDDHIENIQTNYAAGEKVKAKILKLDEERHRISLGMKNSYFTDDIDS--QITEQ 1537

Query: 1173 XXXXXXXXXXXXGASSLDDTFLDLQHKDDLTKCKMMYNSDIGGSEILVQPGRTTCVLPLQ 1352
                             DD    +   D  T   + Y S  G S++L Q      + PL 
Sbjct: 1538 EESDEDIEETGVADDDADDEARSILLTDS-TGMDIKYGS--GVSDVLAQAESRASIPPLD 1594

Query: 1353 XXXXXXXXXXXXNPVSANQDDAKVSEQXXXXXXXXXXXXXXXXXXXXXXXXXRHLQNDMP 1532
                        N +S NQ++ +V+                           R L+ D+P
Sbjct: 1595 VTLDDIEHSDMENFISQNQENNEVTGVDEKSKRRAKKKAKEEREREIRAAEERQLEKDVP 1654

Query: 1533 RTEDEFEKLVRRSPNSSFVWIKYMAYMLSLADVEKARSTAERALRTINIREEAEKLNIWV 1712
            RT DEFEKLVR SPNSSFVWIKYMA+ML+ AD+EKAR+ AERALRTINIREE EKLNIWV
Sbjct: 1655 RTTDEFEKLVRSSPNSSFVWIKYMAFMLNSADIEKARAIAERALRTINIREETEKLNIWV 1714

Query: 1713 AYFNLENEYGSPPEEAVKKLFQRALQYCDPKKLHLALLGVYERTEQYNLVDELTERMTKK 1892
            AYFNLEN+YG+PPEEAV+K+FQRALQYCDPKK+H ALLG+YERTEQ+ L +EL ++M+KK
Sbjct: 1715 AYFNLENQYGNPPEEAVQKVFQRALQYCDPKKVHFALLGMYERTEQHKLAEELLDKMSKK 1774

Query: 1893 FKHSCKVWLRCIQNFLKKNKDGIQSIINRALLSLPHKKHIKFISQTALLEFKIGSAERGR 2072
            FKHSCK+WLR +Q  L + +D +Q ++NRALL LP  KH+KFISQ A+LEFK G  +RGR
Sbjct: 1775 FKHSCKLWLRRVQMLLMQQQDRVQPVVNRALLCLPRHKHVKFISQAAILEFKSGVPDRGR 1834

Query: 2073 SMFESILREYPKRTDLWSIYLDREIRLGDAEVIRALFERATCLGXXXXXXXXXXXXYLDY 2252
            SMFE +LREYPKRTDLWSIYLD+EIRLGD +VIRALFERA  L             YL+Y
Sbjct: 1835 SMFEGVLREYPKRTDLWSIYLDQEIRLGDEDVIRALFERAISLSLPPKKMKFLFKKYLNY 1894

Query: 2253 EKAHGNEDTIEHVKRKAMEYVENTL 2327
            EK+ G+E  IE VK+KAM+YVE+TL
Sbjct: 1895 EKSCGDEARIESVKQKAMDYVESTL 1919


>ref|XP_016669401.1| PREDICTED: rRNA biogenesis protein RRP5-like isoform X1 [Gossypium
            hirsutum]
 ref|XP_016669403.1| PREDICTED: rRNA biogenesis protein RRP5-like isoform X2 [Gossypium
            hirsutum]
          Length = 1928

 Score =  780 bits (2015), Expect = 0.0
 Identities = 416/805 (51%), Positives = 530/805 (65%), Gaps = 30/805 (3%)
 Frame = +3

Query: 3    LSIKPSILSGSEEILTSCASEPLTFSXXXXXXXXXXXXXSEWVWLSVSRSVMAHMYILDS 182
            LSIKPS+L+ + EI    A E   FS             SEW WL++SR V A ++ILD+
Sbjct: 1128 LSIKPSMLADAVEIGVKTALEEFDFSTGQLVTGYVYKVDSEWAWLTISRHVKARLFILDT 1187

Query: 183  SCDPDELEKFQQRYVVGQAVKGRILNINAEKKLLRLTSY-------------------SS 305
             C+P+EL++FQ+ + VG+ V G ILN+N +KKLLR+  +                   S 
Sbjct: 1188 GCEPNELQQFQECFKVGKPVSGHILNVNKDKKLLRIVRHPLGALSTRNVGDEDKRKGESG 1247

Query: 306  SMHADQQFS----QGDIVAGRIKKIFAGVGGLLVQIGPHLCGRVHYTEVVDEWVPYPLRG 473
            +  +D+  +    +GDI+ GRI KI  G+GGL+VQIGP+  GRVH+TE+ D W   PL G
Sbjct: 1248 NNISDESVTAHIHEGDILGGRISKILPGIGGLVVQIGPNNYGRVHFTELKDAWESDPLSG 1307

Query: 474  YQEGQFVKCKILDISHSSEGILHIDLSLRAXXXXXXXXXXXXXXX------RRYEKVDDL 635
            Y EGQFVKCK+L++SHS++G +HIDLSLR                      +R EKV+DL
Sbjct: 1308 YHEGQFVKCKVLEVSHSTKGTIHIDLSLRLSLDGMIPKNPLELASDVDSTSKRAEKVEDL 1367

Query: 636  QPSMNVQGYVKNISTKGCFILLSRVLDARILISNLSDGYIDDPEKEFPVGKLVHAKLLSV 815
             P+M VQGYVKN+  KGCFI+LSR +DA+IL+SNLS+GY++DP+KEFP+GKLV  ++L+V
Sbjct: 1368 YPNMAVQGYVKNVIPKGCFIMLSRKVDAKILLSNLSNGYVNDPKKEFPIGKLVSGRVLAV 1427

Query: 816  EASSKRVEATLRTGSEADNAKSSQASFKNLYVGDIITGQIRRIETYGLFITIDKANVVGL 995
            E  SKRVE TL+       +KS    F  L+VGDI++G+IRR+E+YGLFIT+D  N+VGL
Sbjct: 1428 EPLSKRVEVTLKNSDTKGTSKSEINDFSRLHVGDIVSGRIRRVESYGLFITLDHTNMVGL 1487

Query: 996  CHTSELSDDHIDNLEANYKTGDKVLAKILKIDNERMRVSLGMKKSY-VDDAGSVEQNCXX 1172
            CH SELSDDHI+N++ NY  G+KV AKILK+D ER R+SLGMK SY  DD  S  Q    
Sbjct: 1488 CHFSELSDDHIENIQTNYAAGEKVKAKILKLDEERHRISLGMKNSYFTDDIDS--QITEQ 1545

Query: 1173 XXXXXXXXXXXXGASSLDDTFLDLQHKDDLTKCKMMYNSDIGGSEILVQPGRTTCVLPLQ 1352
                             DD    +   D  T   + Y S  G S++L Q      + PL 
Sbjct: 1546 EESDEDIEETGVADDDADDEARSILLTDS-TGMDIKYGS--GVSDVLAQAESRASIPPLD 1602

Query: 1353 XXXXXXXXXXXXNPVSANQDDAKVSEQXXXXXXXXXXXXXXXXXXXXXXXXXRHLQNDMP 1532
                        N +S NQ++ +V+                           R L+ D+P
Sbjct: 1603 VTLDDIEHSDMENFISQNQENNEVTGVDEKSKRRAKKKAKEEREREIRAAEERQLEKDVP 1662

Query: 1533 RTEDEFEKLVRRSPNSSFVWIKYMAYMLSLADVEKARSTAERALRTINIREEAEKLNIWV 1712
            RT DEFEKLVR SPNSSFVWIKYMA+ML+ AD+EKAR+ AERALRTINIREE EKLNIWV
Sbjct: 1663 RTTDEFEKLVRSSPNSSFVWIKYMAFMLNSADIEKARAIAERALRTINIREETEKLNIWV 1722

Query: 1713 AYFNLENEYGSPPEEAVKKLFQRALQYCDPKKLHLALLGVYERTEQYNLVDELTERMTKK 1892
            AYFNLEN+YG+PPEEAV+K+FQRALQYCDPKK+H ALLG+YERTEQ+ L +EL ++M+KK
Sbjct: 1723 AYFNLENQYGNPPEEAVQKVFQRALQYCDPKKVHFALLGMYERTEQHKLAEELLDKMSKK 1782

Query: 1893 FKHSCKVWLRCIQNFLKKNKDGIQSIINRALLSLPHKKHIKFISQTALLEFKIGSAERGR 2072
            FKHSCK+WLR +Q  L + +D +Q ++NRALL LP  KH+KFISQ A+LEFK G  +RGR
Sbjct: 1783 FKHSCKLWLRRVQMLLMQQQDRVQPVVNRALLCLPRHKHVKFISQAAILEFKSGVPDRGR 1842

Query: 2073 SMFESILREYPKRTDLWSIYLDREIRLGDAEVIRALFERATCLGXXXXXXXXXXXXYLDY 2252
            SMFE +LREYPKRTDLWSIYLD+EIRLGD +VIRALFERA  L             YL+Y
Sbjct: 1843 SMFEGVLREYPKRTDLWSIYLDQEIRLGDEDVIRALFERAISLSLPPKKMKFLFKKYLNY 1902

Query: 2253 EKAHGNEDTIEHVKRKAMEYVENTL 2327
            EK+ G+E  IE VK+KAM+YVE+TL
Sbjct: 1903 EKSCGDEARIESVKQKAMDYVESTL 1927


>ref|XP_024037232.1| LOW QUALITY PROTEIN: rRNA biogenesis protein RRP5 [Citrus clementina]
          Length = 1924

 Score =  780 bits (2013), Expect = 0.0
 Identities = 425/798 (53%), Positives = 539/798 (67%), Gaps = 23/798 (2%)
 Frame = +3

Query: 3    LSIKPSILSGSEEILTSCASEPLTFSXXXXXXXXXXXXXSEWVWLSVSRSVMAHMYILDS 182
            LSIKPS+L+ SE I +    E    S             +EW  L++SR + A ++ILDS
Sbjct: 1138 LSIKPSMLTVSE-IGSKLLFEECDVSIGQRVTGYVYKVDNEWASLTISRHLKAQLFILDS 1196

Query: 183  SCDPDELEKFQQRYVVGQAVKGRILNINAEKKLLRL------------TSYSSSMHADQQ 326
            +C+P EL++FQ+R+ +G+AV G +L+IN EKKLLRL            T   S+ +    
Sbjct: 1197 ACEPSELQQFQRRFHIGKAVSGHVLSINKEKKLLRLVLRPFQDGISDKTVDISNDNMQTF 1256

Query: 327  FSQGDIVAGRIKKIFAGVGGLLVQIGPHLCGRVHYTEVVDEWVPYPLRGYQEGQFVKCKI 506
              +GDIV GRI KI +GVGGL+VQIGPHL GRVH+TE+ +  V  PL GY EGQFVKCK+
Sbjct: 1257 IHEGDIVGGRISKILSGVGGLVVQIGPHLYGRVHFTELKNICVSDPLSGYHEGQFVKCKV 1316

Query: 507  LDISHSSEGILHIDLSLRAXXXXXXXXXXXXXXX------RRYEKVDDLQPSMNVQGYVK 668
            L+IS +  G LH++LSLR+                     +  EK++DL P+M VQGYVK
Sbjct: 1317 LEISRTVRGTLHVELSLRSSLDGMSSTNSSDLSTDVDTPGKHLEKIEDLSPNMIVQGYVK 1376

Query: 669  NISTKGCFILLSRVLDARILISNLSDGYIDDPEKEFPVGKLVHAKLLSVEASSKRVEATL 848
            N+++KGCFI+LSR LDA++L+SNLSDGY++ PEKEFP+GKLV  ++LSVE  SKRVE TL
Sbjct: 1377 NVTSKGCFIMLSRKLDAKVLLSNLSDGYVESPEKEFPIGKLVAGRVLSVEPLSKRVEVTL 1436

Query: 849  RTGSEADNAKSSQASFKNLYVGDIITGQIRRIETYGLFITIDKANVVGLCHTSELSDDHI 1028
            +T      ++S   +  NL+VGDI+ GQI+R+E+YGLFITI+  N+VGLCH SELS+DH+
Sbjct: 1437 KTSDSRTASQSEINNLSNLHVGDIVIGQIKRVESYGLFITIENTNLVGLCHVSELSEDHV 1496

Query: 1029 DNLEANYKTGDKVLAKILKIDNERMRVSLGMKKSYV-DDAGSVEQNCXXXXXXXXXXXXX 1205
            DN+E  Y+ G+KV AKILK+D E+ R+SLGMK SY  +DA +++ +              
Sbjct: 1497 DNIETIYRAGEKVKAKILKVDKEKRRISLGMKSSYFKNDADNLQMSSEEESDEAIEEVGS 1556

Query: 1206 XGASSL-DDTFLDLQHKDDLTKCKMMYNSDIGGSEILVQPGRTTCVLPLQXXXXXXXXXX 1382
               SSL +++ + +Q  D          S+ GGS +L Q      V PL+          
Sbjct: 1557 YNRSSLLENSSVAVQDMD--------MESEDGGSLVLAQIESRASVPPLEVNLDDEQLDM 1608

Query: 1383 XXNPVSANQ---DDAKVSEQXXXXXXXXXXXXXXXXXXXXXXXXXRHLQNDMPRTEDEFE 1553
              N +S NQ   D+AK  ++                         R L+ D PRT DEFE
Sbjct: 1609 D-NGISQNQGHTDEAKTIDEKNNRHAKKKEKEEREQEIRAAEE--RLLEKDAPRTPDEFE 1665

Query: 1554 KLVRRSPNSSFVWIKYMAYMLSLADVEKARSTAERALRTINIREEAEKLNIWVAYFNLEN 1733
            +LVR SPNSSFVWIKYMA+MLS+ADVEKARS AERAL+TINIREE EKLNIWVAYFNLEN
Sbjct: 1666 RLVRSSPNSSFVWIKYMAFMLSMADVEKARSIAERALQTINIREENEKLNIWVAYFNLEN 1725

Query: 1734 EYGSPPEEAVKKLFQRALQYCDPKKLHLALLGVYERTEQYNLVDELTERMTKKFKHSCKV 1913
            EYG+PPEEAV K+FQRALQYCDPKK+HLALLG+YERTEQ  L DEL  +M KKFKHSCKV
Sbjct: 1726 EYGNPPEEAVVKVFQRALQYCDPKKVHLALLGLYERTEQNKLADELLYKMIKKFKHSCKV 1785

Query: 1914 WLRCIQNFLKKNKDGIQSIINRALLSLPHKKHIKFISQTALLEFKIGSAERGRSMFESIL 2093
            WLR +Q  LK+ ++G+Q+++ RALLSLP  KHIKFISQTA+LEFK G A+RGRSMFE IL
Sbjct: 1786 WLRRVQRLLKQQQEGVQAVVQRALLSLPRHKHIKFISQTAILEFKNGVADRGRSMFEGIL 1845

Query: 2094 REYPKRTDLWSIYLDREIRLGDAEVIRALFERATCLGXXXXXXXXXXXXYLDYEKAHGNE 2273
            REYPKRTDLWSIYLD+EIRLGD ++IR LFERA  L             YL+YEK+ G E
Sbjct: 1846 REYPKRTDLWSIYLDQEIRLGDVDLIRGLFERAISLSLPPKKMKFLFKKYLEYEKSLGEE 1905

Query: 2274 DTIEHVKRKAMEYVENTL 2327
            + IE+VK+KAMEYVE+TL
Sbjct: 1906 ERIEYVKQKAMEYVESTL 1923


>gb|ESR43192.1| hypothetical protein CICLE_v10013867mg [Citrus clementina]
          Length = 1935

 Score =  780 bits (2013), Expect = 0.0
 Identities = 425/798 (53%), Positives = 539/798 (67%), Gaps = 23/798 (2%)
 Frame = +3

Query: 3    LSIKPSILSGSEEILTSCASEPLTFSXXXXXXXXXXXXXSEWVWLSVSRSVMAHMYILDS 182
            LSIKPS+L+ SE I +    E    S             +EW  L++SR + A ++ILDS
Sbjct: 1149 LSIKPSMLTVSE-IGSKLLFEECDVSIGQRVTGYVYKVDNEWASLTISRHLKAQLFILDS 1207

Query: 183  SCDPDELEKFQQRYVVGQAVKGRILNINAEKKLLRL------------TSYSSSMHADQQ 326
            +C+P EL++FQ+R+ +G+AV G +L+IN EKKLLRL            T   S+ +    
Sbjct: 1208 ACEPSELQQFQRRFHIGKAVSGHVLSINKEKKLLRLVLRPFQDGISDKTVDISNDNMQTF 1267

Query: 327  FSQGDIVAGRIKKIFAGVGGLLVQIGPHLCGRVHYTEVVDEWVPYPLRGYQEGQFVKCKI 506
              +GDIV GRI KI +GVGGL+VQIGPHL GRVH+TE+ +  V  PL GY EGQFVKCK+
Sbjct: 1268 IHEGDIVGGRISKILSGVGGLVVQIGPHLYGRVHFTELKNICVSDPLSGYHEGQFVKCKV 1327

Query: 507  LDISHSSEGILHIDLSLRAXXXXXXXXXXXXXXX------RRYEKVDDLQPSMNVQGYVK 668
            L+IS +  G LH++LSLR+                     +  EK++DL P+M VQGYVK
Sbjct: 1328 LEISRTVRGTLHVELSLRSSLDGMSSTNSSDLSTDVDTPGKHLEKIEDLSPNMIVQGYVK 1387

Query: 669  NISTKGCFILLSRVLDARILISNLSDGYIDDPEKEFPVGKLVHAKLLSVEASSKRVEATL 848
            N+++KGCFI+LSR LDA++L+SNLSDGY++ PEKEFP+GKLV  ++LSVE  SKRVE TL
Sbjct: 1388 NVTSKGCFIMLSRKLDAKVLLSNLSDGYVESPEKEFPIGKLVAGRVLSVEPLSKRVEVTL 1447

Query: 849  RTGSEADNAKSSQASFKNLYVGDIITGQIRRIETYGLFITIDKANVVGLCHTSELSDDHI 1028
            +T      ++S   +  NL+VGDI+ GQI+R+E+YGLFITI+  N+VGLCH SELS+DH+
Sbjct: 1448 KTSDSRTASQSEINNLSNLHVGDIVIGQIKRVESYGLFITIENTNLVGLCHVSELSEDHV 1507

Query: 1029 DNLEANYKTGDKVLAKILKIDNERMRVSLGMKKSYV-DDAGSVEQNCXXXXXXXXXXXXX 1205
            DN+E  Y+ G+KV AKILK+D E+ R+SLGMK SY  +DA +++ +              
Sbjct: 1508 DNIETIYRAGEKVKAKILKVDKEKRRISLGMKSSYFKNDADNLQMSSEEESDEAIEEVGS 1567

Query: 1206 XGASSL-DDTFLDLQHKDDLTKCKMMYNSDIGGSEILVQPGRTTCVLPLQXXXXXXXXXX 1382
               SSL +++ + +Q  D          S+ GGS +L Q      V PL+          
Sbjct: 1568 YNRSSLLENSSVAVQDMD--------MESEDGGSLVLAQIESRASVPPLEVNLDDEQLDM 1619

Query: 1383 XXNPVSANQ---DDAKVSEQXXXXXXXXXXXXXXXXXXXXXXXXXRHLQNDMPRTEDEFE 1553
              N +S NQ   D+AK  ++                         R L+ D PRT DEFE
Sbjct: 1620 D-NGISQNQGHTDEAKTIDEKNNRHAKKKEKEEREQEIRAAEE--RLLEKDAPRTPDEFE 1676

Query: 1554 KLVRRSPNSSFVWIKYMAYMLSLADVEKARSTAERALRTINIREEAEKLNIWVAYFNLEN 1733
            +LVR SPNSSFVWIKYMA+MLS+ADVEKARS AERAL+TINIREE EKLNIWVAYFNLEN
Sbjct: 1677 RLVRSSPNSSFVWIKYMAFMLSMADVEKARSIAERALQTINIREENEKLNIWVAYFNLEN 1736

Query: 1734 EYGSPPEEAVKKLFQRALQYCDPKKLHLALLGVYERTEQYNLVDELTERMTKKFKHSCKV 1913
            EYG+PPEEAV K+FQRALQYCDPKK+HLALLG+YERTEQ  L DEL  +M KKFKHSCKV
Sbjct: 1737 EYGNPPEEAVVKVFQRALQYCDPKKVHLALLGLYERTEQNKLADELLYKMIKKFKHSCKV 1796

Query: 1914 WLRCIQNFLKKNKDGIQSIINRALLSLPHKKHIKFISQTALLEFKIGSAERGRSMFESIL 2093
            WLR +Q  LK+ ++G+Q+++ RALLSLP  KHIKFISQTA+LEFK G A+RGRSMFE IL
Sbjct: 1797 WLRRVQRLLKQQQEGVQAVVQRALLSLPRHKHIKFISQTAILEFKNGVADRGRSMFEGIL 1856

Query: 2094 REYPKRTDLWSIYLDREIRLGDAEVIRALFERATCLGXXXXXXXXXXXXYLDYEKAHGNE 2273
            REYPKRTDLWSIYLD+EIRLGD ++IR LFERA  L             YL+YEK+ G E
Sbjct: 1857 REYPKRTDLWSIYLDQEIRLGDVDLIRGLFERAISLSLPPKKMKFLFKKYLEYEKSLGEE 1916

Query: 2274 DTIEHVKRKAMEYVENTL 2327
            + IE+VK+KAMEYVE+TL
Sbjct: 1917 ERIEYVKQKAMEYVESTL 1934


>ref|XP_010087548.1| rRNA biogenesis protein RRP5 isoform X1 [Morus notabilis]
 gb|EXB29321.1| Protein RRP5-like protein [Morus notabilis]
          Length = 1916

 Score =  773 bits (1995), Expect = 0.0
 Identities = 424/798 (53%), Positives = 526/798 (65%), Gaps = 23/798 (2%)
 Frame = +3

Query: 3    LSIKPSILSGSEEILTSCASEPLTFSXXXXXXXXXXXXXSEWVWLSVSRSVMAHMYILDS 182
            LS+KPS+L+GS EI    A+E L FS             SEWVWL++SR V A ++ILDS
Sbjct: 1135 LSVKPSVLTGSSEIEDELATEELDFSTGQRVSGYVYKVDSEWVWLTISRHVRAQLFILDS 1194

Query: 183  SCDPDELEKFQQRYVVGQAVKGRILNINAEKKLLRLT-----SYSS----------SMHA 317
            SCDP E  +FQ+R+ VG+ + G IL +N +KKLLRL      S S           S + 
Sbjct: 1195 SCDPAEHTEFQKRFHVGKVITGYILTVNKDKKLLRLVLRPVLSVSHKVSDGEVLIPSENV 1254

Query: 318  DQQFSQGDIVAGRIKKIFAGVGGLLVQIGPHLCGRVHYTEVVDEWVPYPLRGYQEGQFVK 497
                 +G I+ GRI KI  GVGGL VQIGPH  GRVH+ E+ D WV  PL GY EGQFVK
Sbjct: 1255 TAHICEGCILGGRISKILLGVGGLTVQIGPHTYGRVHFAELTDSWVSDPLSGYHEGQFVK 1314

Query: 498  CKILDISHSSEGILHIDLSLRAXXXXXXXXXXXXXXXRR-----YEKVDDLQPSMNVQGY 662
            CK+L +  S +G   IDLSLR+               +       E ++DL P M VQGY
Sbjct: 1315 CKVLKVIQSVKGKFQIDLSLRSSRVGMISQDAKEARKKEPQTKFVETIEDLHPDMAVQGY 1374

Query: 663  VKNISTKGCFILLSRVLDARILISNLSDGYIDDPEKEFPVGKLVHAKLLSVEASSKRVEA 842
            VKN++ KGCFI+LSR +DA+IL+SNLSDGY+ +PEKEFP+GKLV  ++LSVE  SKRV+ 
Sbjct: 1375 VKNVTPKGCFIVLSRKVDAKILLSNLSDGYVINPEKEFPIGKLVTGRVLSVEPLSKRVQV 1434

Query: 843  TLRTGSEADNAKSSQASFKNLYVGDIITGQIRRIETYGLFITIDKANVVGLCHTSELSDD 1022
            TL+T   +  +++S  S  +L+VGD I+G+I+R+E++GLFITI+  N+VGLCH SELSDD
Sbjct: 1435 TLKTLGASKKSETSNLS--SLHVGDFISGRIKRVESFGLFITINDTNLVGLCHKSELSDD 1492

Query: 1023 HIDNLEANYKTGDKVLAKILKIDNERMRVSLGMKKSYVDDAGSVEQNCXXXXXXXXXXXX 1202
             IDN+EA Y+ G++V AKILK+D +R R+SLGMK SY+ D    E+N             
Sbjct: 1493 QIDNIEAKYRAGERVRAKILKVDPQRNRISLGMKDSYLLDDNDTEENSDQEADASNGFVN 1552

Query: 1203 XXGASSLDDTFLDLQHKDDLTKCKMMYNSDIGGSEILVQPGRTTCVLPLQXXXXXXXXXX 1382
                 SL D  +D++            N +I    IL Q      V PL+          
Sbjct: 1553 DTKLISLPDNDMDVE----------CANLEI---PILAQAESRASVPPLEVTLDDVYQED 1599

Query: 1383 XXNPVSANQ---DDAKVSEQXXXXXXXXXXXXXXXXXXXXXXXXXRHLQNDMPRTEDEFE 1553
              N VS N+   D+A   ++                         R L+ D+PRT +EFE
Sbjct: 1600 VNNVVSRNEEPIDEATTLDEKTKRRGKKKAKEEREREIRAAEE--RLLEKDIPRTTEEFE 1657

Query: 1554 KLVRRSPNSSFVWIKYMAYMLSLADVEKARSTAERALRTINIREEAEKLNIWVAYFNLEN 1733
            KLVR SPNSSFVWIKYM + +S+ADVEKARS AERAL+TINIREE EKLNIWVAYFNLEN
Sbjct: 1658 KLVRGSPNSSFVWIKYMDFAISMADVEKARSIAERALQTINIREENEKLNIWVAYFNLEN 1717

Query: 1734 EYGSPPEEAVKKLFQRALQYCDPKKLHLALLGVYERTEQYNLVDELTERMTKKFKHSCKV 1913
            +YG+PPEEAV+K+FQRALQY DPKK+HLALLG+YERTEQ+ L DEL ERMTKKFK SCKV
Sbjct: 1718 KYGNPPEEAVQKIFQRALQYNDPKKVHLALLGMYERTEQHRLADELVERMTKKFKQSCKV 1777

Query: 1914 WLRCIQNFLKKNKDGIQSIINRALLSLPHKKHIKFISQTALLEFKIGSAERGRSMFESIL 2093
            WLR  Q  L + +DG+Q I+NRALLSLP  KHIKFISQTA+LEFK G A  GRSMFE IL
Sbjct: 1778 WLRRTQRVLNQQQDGVQPIVNRALLSLPKHKHIKFISQTAILEFKCGVAHMGRSMFEGIL 1837

Query: 2094 REYPKRTDLWSIYLDREIRLGDAEVIRALFERATCLGXXXXXXXXXXXXYLDYEKAHGNE 2273
            +EYPKRTDLWSIYLD+EIRLGD +VIRALFERATCL             YL+YEK+ G+E
Sbjct: 1838 KEYPKRTDLWSIYLDQEIRLGDVDVIRALFERATCLSLPAKKMKFLFKKYLEYEKSLGDE 1897

Query: 2274 DTIEHVKRKAMEYVENTL 2327
            + IE+VK+KAM+YVE+TL
Sbjct: 1898 ERIEYVKKKAMDYVESTL 1915



 Score = 67.0 bits (162), Expect = 2e-07
 Identities = 80/337 (23%), Positives = 142/337 (42%), Gaps = 29/337 (8%)
 Frame = +3

Query: 213  QQRYVVGQAVKGRILNINAEKKLLRL-----------TSYSSSMHADQQFSQGDIVAGRI 359
            Q++++ GQ+V   ++ + +   + RL           TS S        ++ G +V   I
Sbjct: 1010 QKQFLNGQSVMATVMALPSPSTMGRLLLLLNSIGEPGTSSSKRAKKKSSYTLGSLVQAEI 1069

Query: 360  KKIFAGVGGLLVQIGPHLCGRVHYTEVVDEWV-PYPLRGYQEGQFVKCKI---LDISHSS 527
             +I      L   +G H  GR+H TEV D+ V   P   ++ GQ V  KI   ++ S S 
Sbjct: 1070 TEIRPLELRLKFGVGFH--GRLHITEVYDDNVLENPFSNFRVGQTVTAKIVGKINHSDSK 1127

Query: 528  EGILHIDLSLRAXXXXXXXXXXXXXXXRRYEKVDDLQPSMNVQGYVKNISTKGCFILLSR 707
            +     DLS++                       D      V GYV  + ++  ++ +SR
Sbjct: 1128 QKSYQFDLSVKPSVLTGSSEIEDELATEEL----DFSTGQRVSGYVYKVDSEWVWLTISR 1183

Query: 708  VLDARILISNLSDGYIDDPE--KEFPVGKLVHAKLLSVEASSKRVEATLR-------TGS 860
             + A++ I + S    +  E  K F VGK++   +L+V    K +   LR         S
Sbjct: 1184 HVRAQLFILDSSCDPAEHTEFQKRFHVGKVITGYILTVNKDKKLLRLVLRPVLSVSHKVS 1243

Query: 861  EADNAKSSQASFKNLYVGDIITGQIRRI--ETYGLFITIDKANVVGLCHTSELSDDHIDN 1034
            + +    S+    ++  G I+ G+I +I     GL + I   +  G  H +EL+D  + +
Sbjct: 1244 DGEVLIPSENVTAHICEGCILGGRISKILLGVGGLTVQIG-PHTYGRVHFAELTDSWVSD 1302

Query: 1035 LEANYKTGDKVLAKILKIDNE---RMRVSLGMKKSYV 1136
              + Y  G  V  K+LK+      + ++ L ++ S V
Sbjct: 1303 PLSGYHEGQFVKCKVLKVIQSVKGKFQIDLSLRSSRV 1339