BLASTX nr result

ID: Cheilocostus21_contig00026071 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00026071
         (432 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008781639.1| PREDICTED: neurofilament medium polypeptide ...    55   6e-06

>ref|XP_008781639.1| PREDICTED: neurofilament medium polypeptide [Phoenix dactylifera]
          Length = 467

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
 Frame = +1

Query: 1   FRKVFRIPDDVVLDQINACFCEDEAILMIFMPKSRIGEVSGRXXXXXXXXXXXXXXXXXX 180
           F+KVF IP+ + LD+I+A F E+ A+L++ MPK   G+VSG                   
Sbjct: 81  FQKVFGIPNGLALDRIDAGFDEENAVLIVLMPKLIQGDVSGVEIEEIKQGEDQEEEAKEG 140

Query: 181 GDT-----KIQIGTASSASDRNGDKGPEHMDAESNIRREKQEEPGKNTDIPENALAETEK 345
            +      K + G A+S  +   +KG    D E++I  ++QEE GK+ ++    L + ++
Sbjct: 141 EEASLEQDKQEEGGATSKEEEQQEKGE---DKEASITEDEQEEKGKDDEV----LMKEKE 193

Query: 346 SAVNGE 363
             V GE
Sbjct: 194 QEVKGE 199


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