BLASTX nr result

ID: Cheilocostus21_contig00025346 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00025346
         (406 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009395878.1| PREDICTED: multiple RNA-binding domain-conta...   109   5e-25
ref|XP_009395877.1| PREDICTED: multiple RNA-binding domain-conta...   109   5e-25

>ref|XP_009395878.1| PREDICTED: multiple RNA-binding domain-containing protein 1 isoform
           X2 [Musa acuminata subsp. malaccensis]
          Length = 659

 Score =  109 bits (272), Expect = 5e-25
 Identities = 61/137 (44%), Positives = 83/137 (60%), Gaps = 7/137 (5%)
 Frame = -1

Query: 400 ISNNYLKGHNVKEHIKQGSFEHVVTLKKMRH-------GDSSPFSDSDENILQDNEAFQK 242
           ISNN+  G+++KEH  QGS + +V  K+ RH         S+  S S+EN LQD + F +
Sbjct: 314 ISNNHPGGYDIKEHATQGSLDQLVRSKRKRHYNGTTCGNTSASLSGSEENFLQDKDTFHR 373

Query: 241 TKELLTNKHQFLPRRRRNELTTGGQSEIGKFAEQTCTSMKSLSEQKAQSGKVIQFALNKN 62
           TK  L+ KHQ LPR   NEL T  +   G F E   +S++SLSE KA + KV+Q  L +N
Sbjct: 374 TKGSLSVKHQCLPRS--NELATNAKRTTGMFPEPELSSLRSLSEHKAPADKVVQSLLKEN 431

Query: 61  ASETTVMQNSVPCCSTS 11
            S TT MQN+VP  S++
Sbjct: 432 TSSTTAMQNAVPSGSSA 448


>ref|XP_009395877.1| PREDICTED: multiple RNA-binding domain-containing protein 1 isoform
           X1 [Musa acuminata subsp. malaccensis]
          Length = 700

 Score =  109 bits (272), Expect = 5e-25
 Identities = 61/137 (44%), Positives = 83/137 (60%), Gaps = 7/137 (5%)
 Frame = -1

Query: 400 ISNNYLKGHNVKEHIKQGSFEHVVTLKKMRH-------GDSSPFSDSDENILQDNEAFQK 242
           ISNN+  G+++KEH  QGS + +V  K+ RH         S+  S S+EN LQD + F +
Sbjct: 355 ISNNHPGGYDIKEHATQGSLDQLVRSKRKRHYNGTTCGNTSASLSGSEENFLQDKDTFHR 414

Query: 241 TKELLTNKHQFLPRRRRNELTTGGQSEIGKFAEQTCTSMKSLSEQKAQSGKVIQFALNKN 62
           TK  L+ KHQ LPR   NEL T  +   G F E   +S++SLSE KA + KV+Q  L +N
Sbjct: 415 TKGSLSVKHQCLPRS--NELATNAKRTTGMFPEPELSSLRSLSEHKAPADKVVQSLLKEN 472

Query: 61  ASETTVMQNSVPCCSTS 11
            S TT MQN+VP  S++
Sbjct: 473 TSSTTAMQNAVPSGSSA 489


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