BLASTX nr result

ID: Cheilocostus21_contig00025279 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00025279
         (448 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_044939760.1| hypothetical protein, partial [Flavonifracto...    58   1e-07

>ref|WP_044939760.1| hypothetical protein, partial [Flavonifractor plautii]
 gb|KGF56239.1| hypothetical protein HMPREF9460_01154, partial [Clostridium
           orbiscindens 1_3_50AFAA]
          Length = 169

 Score = 58.2 bits (139), Expect = 1e-07
 Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
 Frame = -2

Query: 339 LESSQETKTGQTEKSHVAKPSQEDXXXXXXXXXXXXKLPEPFQDSDSKQKE-SNLSQPSQ 163
           ++S++E  +G TE    A+P+++                +P ++  S+  E S  +QP++
Sbjct: 47  VQSAEEGASGTTESLEEAQPAEKGASEATEPSEEA----QPTEEGASEATEPSEEAQPTE 102

Query: 162 EGKSEHEEESKLSQPSHEGTPELNEEGKLSQPSEQKASELLVPSQEGKSAQKKK 1
           EG SE  E S+ +QP+ EG PE  E  + +QP+E+ A E + P +E  S + K+
Sbjct: 103 EGASEAMEPSEEAQPTEEGAPEATEPSEEAQPAEEGAPEAMEPPKEAPSEKGKE 156


Top