BLASTX nr result

ID: Cheilocostus21_contig00025175 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00025175
         (566 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009417706.1| PREDICTED: probable cadmium/zinc-transportin...    59   1e-06

>ref|XP_009417706.1| PREDICTED: probable cadmium/zinc-transporting ATPase HMA1,
           chloroplastic [Musa acuminata subsp. malaccensis]
          Length = 861

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 43/103 (41%), Positives = 51/103 (49%), Gaps = 29/103 (28%)
 Frame = +2

Query: 257 MEALAFC---RTNPATSSPFPIC----RSRKTSQRQL-----------------RLNSFP 364
           ME+LAF    R +PA    FPIC    R+R T QR+                  R NSF 
Sbjct: 1   MESLAFAARSRNSPAALDQFPICKRTTRARATQQRRSSSSPFNYRTPTLVHRYRRPNSFA 60

Query: 365 H-----FPQSPILYAIFRPRLLLGPPNCSAHGRADHGVGRHNY 478
           H     F +SP+LY    PR+L  P  CSAHG ADHGV  H+Y
Sbjct: 61  HSSSLIFSKSPLLYPPSGPRILR-PLCCSAHGNADHGVRSHSY 102


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