BLASTX nr result

ID: Cheilocostus21_contig00024856 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00024856
         (409 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009410345.1| PREDICTED: putative leucine-rich repeat-cont...    85   2e-16
ref|XP_009387782.1| PREDICTED: uncharacterized protein LOC103974...    62   2e-08

>ref|XP_009410345.1| PREDICTED: putative leucine-rich repeat-containing protein
            DDB_G0290503 [Musa acuminata subsp. malaccensis]
          Length = 1277

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 47/92 (51%), Positives = 56/92 (60%)
 Frame = -2

Query: 408  LGPDEEPPVLRTNQFKISGFPXXXXXXXXXXXXXXXXAQIETSKAVESFPALHSATKSQP 229
            LGPDEEPPVLR+NQ K   FP                A+IE SK V+ FP L +ATK+QP
Sbjct: 998  LGPDEEPPVLRSNQGKSPSFPLPPANISNSVPPVALEAKIEASKGVDLFPTLQAATKNQP 1057

Query: 228  VPRKKSVKLSSDKTEEAVVALFPERETENEKV 133
            V  KK+ K  SDKT+E VVA   +RE EN +V
Sbjct: 1058 VKTKKTAKPISDKTKETVVAKVLDREVENNEV 1089


>ref|XP_009387782.1| PREDICTED: uncharacterized protein LOC103974640 [Musa acuminata
            subsp. malaccensis]
          Length = 1255

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 39/89 (43%), Positives = 49/89 (55%)
 Frame = -2

Query: 408  LGPDEEPPVLRTNQFKISGFPXXXXXXXXXXXXXXXXAQIETSKAVESFPALHSATKSQP 229
            LGPDE+PPV+ +NQ K  G                  A++ETSK  +SFPAL +ATK+QP
Sbjct: 976  LGPDEDPPVIHSNQGKGLGLHHPQANVGVSVKPVALEAKLETSKE-DSFPALPAATKNQP 1034

Query: 228  VPRKKSVKLSSDKTEEAVVALFPERETEN 142
            V  KK  K   D+T+E   A    RE EN
Sbjct: 1035 VKPKKPAKPMLDETKETSTARVLVREVEN 1063


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