BLASTX nr result
ID: Cheilocostus21_contig00024736
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00024736
(984 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_018674227.1| PREDICTED: MMS19 nucleotide excision repair ... 407 e-131
ref|XP_018674225.1| PREDICTED: MMS19 nucleotide excision repair ... 407 e-130
ref|XP_008810490.1| PREDICTED: MMS19 nucleotide excision repair ... 340 e-104
ref|XP_019710613.1| PREDICTED: MMS19 nucleotide excision repair ... 336 e-103
ref|XP_020264910.1| MMS19 nucleotide excision repair protein hom... 328 e-101
ref|XP_020105720.1| MMS19 nucleotide excision repair protein hom... 329 e-100
ref|XP_020264908.1| MMS19 nucleotide excision repair protein hom... 328 e-100
ref|XP_020264905.1| MMS19 nucleotide excision repair protein hom... 328 e-100
ref|XP_020105725.1| MMS19 nucleotide excision repair protein hom... 323 3e-99
ref|XP_019052369.1| PREDICTED: MMS19 nucleotide excision repair ... 323 5e-99
ref|XP_020105724.1| MMS19 nucleotide excision repair protein hom... 323 5e-99
ref|XP_020105723.1| MMS19 nucleotide excision repair protein hom... 323 5e-99
ref|XP_020105721.1| MMS19 nucleotide excision repair protein hom... 323 1e-98
ref|XP_010249497.1| PREDICTED: MMS19 nucleotide excision repair ... 323 2e-98
ref|XP_020105714.1| MMS19 nucleotide excision repair protein hom... 323 4e-98
gb|OAY82164.1| MMS19 nucleotide excision repair protein, partial... 322 1e-97
gb|OVA08536.1| RNAPII transcription regulator C-terminal [Maclea... 313 2e-94
gb|POE98687.1| mms19 nucleotide excision repair protein like [Qu... 294 3e-90
ref|XP_006853692.3| MMS19 nucleotide excision repair protein hom... 299 2e-89
ref|XP_020528710.1| MMS19 nucleotide excision repair protein hom... 299 2e-89
>ref|XP_018674227.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X2 [Musa acuminata subsp. malaccensis]
ref|XP_018674229.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X2 [Musa acuminata subsp. malaccensis]
Length = 1006
Score = 407 bits (1047), Expect = e-131
Identities = 215/328 (65%), Positives = 249/328 (75%), Gaps = 1/328 (0%)
Frame = +2
Query: 2 LLKGNILAAQSLACMINKWPADIKEEQLSTICSLDQAIEEILMXXXXXXXXXXPTRKYNF 181
LLKGN+LAAQ+LA M+NKWPAD+ + ++S SLDQAIEEIL NF
Sbjct: 683 LLKGNMLAAQALASMVNKWPADVNKSEISY--SLDQAIEEILKSCLWTSESSS-----NF 735
Query: 182 VDGDIYCRKSVVLGIAWVGKGLLMRGHEKVKDIVMFLLKCLVSGQN-DVISSQQHENGKV 358
+D D K+VVLG+AW+GKGLLMRGHEK+K+I M LLKCLV+G+ D+ QQHENGK
Sbjct: 736 IDRDSCFHKNVVLGLAWIGKGLLMRGHEKLKEIAMLLLKCLVAGKYVDITPFQQHENGKD 795
Query: 359 SGLDTSSVLATSAADAFHVLLNDSEDCLNKKFHATVRPLYKQRFFXXXXXXXXXXXKESD 538
+G D SS LAT AADAFHV L+DSEDCLNKKFHAT+RPLYKQRFF KESD
Sbjct: 796 AGQDASSPLATFAADAFHVFLSDSEDCLNKKFHATIRPLYKQRFFSSMLPILLSSIKESD 855
Query: 539 SWNTKGALYRAFGHVISDTPLVAVVAESKKIMPTXXXXXXXXXXDVGNKDMMYSLLLILS 718
+ K LYRAFGHVISDTPL AVV E+KKI+PT D+ NKD++YSLLL++S
Sbjct: 856 PSSKKVVLYRAFGHVISDTPLAAVVGEAKKIVPTLADALAMLSLDILNKDLIYSLLLVVS 915
Query: 719 GILMDDNGKATILENLHSVIGRLIKLISCPHFMIVRETAIQCLVAISVLPHARIYPFRSQ 898
GILMD+NGKA +LEN+H++I LIKLIS PH MIVRETAIQCLVAIS LP+ARIYP+R Q
Sbjct: 916 GILMDNNGKAIVLENVHTIISLLIKLISYPHLMIVRETAIQCLVAISALPYARIYPYRPQ 975
Query: 899 VLLAVSVALDDRKRAVRQEAVRCRQAWA 982
VL AVS ALDDRKR VRQEAVRCRQAWA
Sbjct: 976 VLRAVSTALDDRKRVVRQEAVRCRQAWA 1003
>ref|XP_018674225.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X1 [Musa acuminata subsp. malaccensis]
ref|XP_018674226.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X1 [Musa acuminata subsp. malaccensis]
Length = 1126
Score = 407 bits (1047), Expect = e-130
Identities = 215/328 (65%), Positives = 249/328 (75%), Gaps = 1/328 (0%)
Frame = +2
Query: 2 LLKGNILAAQSLACMINKWPADIKEEQLSTICSLDQAIEEILMXXXXXXXXXXPTRKYNF 181
LLKGN+LAAQ+LA M+NKWPAD+ + ++S SLDQAIEEIL NF
Sbjct: 803 LLKGNMLAAQALASMVNKWPADVNKSEISY--SLDQAIEEILKSCLWTSESSS-----NF 855
Query: 182 VDGDIYCRKSVVLGIAWVGKGLLMRGHEKVKDIVMFLLKCLVSGQN-DVISSQQHENGKV 358
+D D K+VVLG+AW+GKGLLMRGHEK+K+I M LLKCLV+G+ D+ QQHENGK
Sbjct: 856 IDRDSCFHKNVVLGLAWIGKGLLMRGHEKLKEIAMLLLKCLVAGKYVDITPFQQHENGKD 915
Query: 359 SGLDTSSVLATSAADAFHVLLNDSEDCLNKKFHATVRPLYKQRFFXXXXXXXXXXXKESD 538
+G D SS LAT AADAFHV L+DSEDCLNKKFHAT+RPLYKQRFF KESD
Sbjct: 916 AGQDASSPLATFAADAFHVFLSDSEDCLNKKFHATIRPLYKQRFFSSMLPILLSSIKESD 975
Query: 539 SWNTKGALYRAFGHVISDTPLVAVVAESKKIMPTXXXXXXXXXXDVGNKDMMYSLLLILS 718
+ K LYRAFGHVISDTPL AVV E+KKI+PT D+ NKD++YSLLL++S
Sbjct: 976 PSSKKVVLYRAFGHVISDTPLAAVVGEAKKIVPTLADALAMLSLDILNKDLIYSLLLVVS 1035
Query: 719 GILMDDNGKATILENLHSVIGRLIKLISCPHFMIVRETAIQCLVAISVLPHARIYPFRSQ 898
GILMD+NGKA +LEN+H++I LIKLIS PH MIVRETAIQCLVAIS LP+ARIYP+R Q
Sbjct: 1036 GILMDNNGKAIVLENVHTIISLLIKLISYPHLMIVRETAIQCLVAISALPYARIYPYRPQ 1095
Query: 899 VLLAVSVALDDRKRAVRQEAVRCRQAWA 982
VL AVS ALDDRKR VRQEAVRCRQAWA
Sbjct: 1096 VLRAVSTALDDRKRVVRQEAVRCRQAWA 1123
>ref|XP_008810490.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Phoenix
dactylifera]
Length = 1153
Score = 340 bits (873), Expect = e-104
Identities = 189/339 (55%), Positives = 234/339 (69%), Gaps = 13/339 (3%)
Frame = +2
Query: 2 LLKGNILAAQSLACMINKWPADIKEEQLSTICSLDQAIEEILMXXXXXXXXXXPTRKYNF 181
LLKG++ AAQ+LA M+NKW +I + ++S+ +LD+AIE IL K +
Sbjct: 813 LLKGHLPAAQALASMVNKWHVNIDKSEVSSAYTLDEAIEMILERSLLSIQSSSNLGKSDL 872
Query: 182 VDGD---IYC----------RKSVVLGIAWVGKGLLMRGHEKVKDIVMFLLKCLVSGQND 322
++ + C + + V+G+AW+GKGLLMRGHEKVK+I M LLK L+S
Sbjct: 873 LNSGERMLSCLCLLNKNSSFQNNAVVGLAWIGKGLLMRGHEKVKEIAMLLLKYLLSNPYK 932
Query: 323 VISSQQHENGKVSGLDTSSVLATSAADAFHVLLNDSEDCLNKKFHATVRPLYKQRFFXXX 502
+ S +G GLD + LATSAADAFHV+L+DSE CLNKKFHAT+RPLYKQRFF
Sbjct: 933 ELHSDVSGSG--DGLDVHTSLATSAADAFHVILSDSEVCLNKKFHATIRPLYKQRFFSSM 990
Query: 503 XXXXXXXXKESDSWNTKGALYRAFGHVISDTPLVAVVAESKKIMPTXXXXXXXXXXDVGN 682
K+S S + + AL RAF HVISD PL AVVAE+KKI+P+ DV N
Sbjct: 991 MPVLLSSIKQSRSLSMRVALCRAFAHVISDAPLAAVVAEAKKIVPSLMDSFAMLSEDVLN 1050
Query: 683 KDMMYSLLLILSGILMDDNGKATILENLHSVIGRLIKLISCPHFMIVRETAIQCLVAISV 862
KD++YSLLL+LSGILMDDNGK I+EN+++VI LI+LI PH M+VRETAIQCLVA+S
Sbjct: 1051 KDLIYSLLLVLSGILMDDNGKEAIVENINTVISHLIRLIFYPHMMLVRETAIQCLVAMSG 1110
Query: 863 LPHARIYPFRSQVLLAVSVALDDRKRAVRQEAVRCRQAW 979
LPHARIYP R QVL AVS ALDD+KRAVRQEAVRCRQAW
Sbjct: 1111 LPHARIYPMRPQVLRAVSKALDDQKRAVRQEAVRCRQAW 1149
>ref|XP_019710613.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Elaeis
guineensis]
Length = 1154
Score = 336 bits (862), Expect = e-103
Identities = 186/339 (54%), Positives = 230/339 (67%), Gaps = 13/339 (3%)
Frame = +2
Query: 2 LLKGNILAAQSLACMINKWPADIKEEQLSTICSLDQAIEEILMXXXXXXXXXXPTRKYNF 181
LLKG++ AAQ+LA M+NKW +I + ++ +LD+AIE IL K +
Sbjct: 814 LLKGHLPAAQALASMVNKWHVNIDKSEVPNAYTLDEAIEMILERSLLSVQSSSNLGKSDL 873
Query: 182 VDGD---IYC----------RKSVVLGIAWVGKGLLMRGHEKVKDIVMFLLKCLVSGQND 322
++ D + C + + V+G+AW+GKGLLMRGHEKVK+I M LL+ L+S
Sbjct: 874 LNKDERMLSCLCLLNNNSSFQSNAVVGLAWIGKGLLMRGHEKVKEIAMLLLQYLLSNPYK 933
Query: 323 VISSQQHENGKVSGLDTSSVLATSAADAFHVLLNDSEDCLNKKFHATVRPLYKQRFFXXX 502
+ S +G LD + LATSAADAFHV+L+DSE CLNK FHA +RPLYKQRFF
Sbjct: 934 ELHSDASGSG--DSLDVHTSLATSAADAFHVILSDSEVCLNKNFHAMIRPLYKQRFFSSM 991
Query: 503 XXXXXXXXKESDSWNTKGALYRAFGHVISDTPLVAVVAESKKIMPTXXXXXXXXXXDVGN 682
K+S S + + ALYRAF HVISD PL AVVAE+KKI+P+ DV N
Sbjct: 992 MPVLLSSIKQSCSSSMRVALYRAFAHVISDAPLAAVVAEAKKILPSLMDSLAMLSEDVLN 1051
Query: 683 KDMMYSLLLILSGILMDDNGKATILENLHSVIGRLIKLISCPHFMIVRETAIQCLVAISV 862
KD++YSLLL+LSGILMDDNGK I+EN+++VI LI+LI PH M+VRETAIQCLVA+S
Sbjct: 1052 KDLIYSLLLVLSGILMDDNGKEAIIENINTVISDLIRLIFYPHMMLVRETAIQCLVAMSA 1111
Query: 863 LPHARIYPFRSQVLLAVSVALDDRKRAVRQEAVRCRQAW 979
LPHARIYP R QVL AVS ALDDRKR VRQEAVRCRQAW
Sbjct: 1112 LPHARIYPMRPQVLRAVSKALDDRKRVVRQEAVRCRQAW 1150
>ref|XP_020264910.1| MMS19 nucleotide excision repair protein homolog isoform X4
[Asparagus officinalis]
Length = 1024
Score = 328 bits (841), Expect = e-101
Identities = 174/334 (52%), Positives = 224/334 (67%), Gaps = 7/334 (2%)
Frame = +2
Query: 2 LLKGNILAAQSLACMINKWPADIKEEQLSTICSLDQAIEEILMXXXXXXXXXXPTRKY-N 178
LLKG++ AAQ+LA MINKWPA+I +LS+ L+ I+ +L K N
Sbjct: 682 LLKGHLPAAQALASMINKWPANIGTAELSSTHELEVVIDVVLESISAVLSSCLKECKIAN 741
Query: 179 FVDGDIYCRKSV------VLGIAWVGKGLLMRGHEKVKDIVMFLLKCLVSGQNDVISSQQ 340
D ++ C + ++G+AW+GK LLMRGH+KVK+I LLKCL+S Q+ +S
Sbjct: 742 GTDDNLSCSSLISYQIHAIVGLAWLGKSLLMRGHDKVKEIAKRLLKCLLSDQDIPATSVA 801
Query: 341 HENGKVSGLDTSSVLATSAADAFHVLLNDSEDCLNKKFHATVRPLYKQRFFXXXXXXXXX 520
+ + + + S+L +AADAFH+LL DSE CLN+KFHAT+RPLYKQRFF
Sbjct: 802 KDEARDNDQNMHSLLIRAAADAFHILLTDSEVCLNRKFHATMRPLYKQRFFSSMMPVLLS 861
Query: 521 XXKESDSWNTKGALYRAFGHVISDTPLVAVVAESKKIMPTXXXXXXXXXXDVGNKDMMYS 700
KES+S T+ LYRA GH+ SDTPL AVVAE+KK++P V NK+M Y+
Sbjct: 862 SIKESNSSRTRAILYRALGHIFSDTPLAAVVAEAKKVIPALLEGLSISTLGVSNKEMTYN 921
Query: 701 LLLILSGILMDDNGKATILENLHSVIGRLIKLISCPHFMIVRETAIQCLVAISVLPHARI 880
LLL+LSGILMD+NGK I+EN H++I LI+L+S PH M+VRETAIQCL A+S LPH RI
Sbjct: 922 LLLVLSGILMDENGKEAIVENAHTIINHLIRLVSYPHMMLVRETAIQCLTAMSSLPHTRI 981
Query: 881 YPFRSQVLLAVSVALDDRKRAVRQEAVRCRQAWA 982
YP R QVL A+ ++LDD KR VRQEAVRCRQAWA
Sbjct: 982 YPMRPQVLRALVMSLDDPKRHVRQEAVRCRQAWA 1015
>ref|XP_020105720.1| MMS19 nucleotide excision repair protein homolog isoform X2 [Ananas
comosus]
Length = 1137
Score = 329 bits (843), Expect = e-100
Identities = 179/328 (54%), Positives = 224/328 (68%), Gaps = 1/328 (0%)
Frame = +2
Query: 2 LLKGNILAAQSLACMINKWPADIKEEQLSTICSLDQAIEEIL-MXXXXXXXXXXPTRKYN 178
LL+G + AAQ+LA ++NKWP++ +LS++ + DQAI+ +L Y+
Sbjct: 816 LLEGQLPAAQALASILNKWPSNGNISELSSVYTFDQAIDLVLEKCFTVLSSSSFLANFYS 875
Query: 179 FVDGDIYCRKSVVLGIAWVGKGLLMRGHEKVKDIVMFLLKCLVSGQNDVISSQQHENGKV 358
D I + + G+AWVGKGLLMRGHEKVK+I MF LKCL+S QN I +
Sbjct: 876 SNDSKI----NAIAGLAWVGKGLLMRGHEKVKEITMFFLKCLLSSQNSEIMQLNQKE--- 928
Query: 359 SGLDTSSVLATSAADAFHVLLNDSEDCLNKKFHATVRPLYKQRFFXXXXXXXXXXXKESD 538
LD S+LATSAADAF ++++DS+ CL+K+FHAT +PLYKQRFF KE
Sbjct: 929 --LDARSLLATSAADAFQLIMSDSDVCLSKQFHATTKPLYKQRFFSSLIPVLLSSVKEYA 986
Query: 539 SWNTKGALYRAFGHVISDTPLVAVVAESKKIMPTXXXXXXXXXXDVGNKDMMYSLLLILS 718
+ NTK LYRAFGH+IS+TPL AVVAES KI+PT + NKD++YSLLL+LS
Sbjct: 987 TMNTKTVLYRAFGHLISNTPLAAVVAESHKIVPTLVDCLGILSLNTQNKDLIYSLLLVLS 1046
Query: 719 GILMDDNGKATILENLHSVIGRLIKLISCPHFMIVRETAIQCLVAISVLPHARIYPFRSQ 898
GILMD NGK I EN+H VI L KL+ PH M+VRETA+QCLVA+S LPH+RIYP R Q
Sbjct: 1047 GILMDKNGKEHITENIHLVINLLAKLVLYPHMMLVRETALQCLVAMSGLPHSRIYPMRLQ 1106
Query: 899 VLLAVSVALDDRKRAVRQEAVRCRQAWA 982
VL AV+ ALDD+K AVRQEAVRCRQAWA
Sbjct: 1107 VLRAVTKALDDKKWAVRQEAVRCRQAWA 1134
>ref|XP_020264908.1| MMS19 nucleotide excision repair protein homolog isoform X2
[Asparagus officinalis]
gb|ONK69772.1| uncharacterized protein A4U43_C05F26550 [Asparagus officinalis]
Length = 1144
Score = 328 bits (841), Expect = e-100
Identities = 174/334 (52%), Positives = 224/334 (67%), Gaps = 7/334 (2%)
Frame = +2
Query: 2 LLKGNILAAQSLACMINKWPADIKEEQLSTICSLDQAIEEILMXXXXXXXXXXPTRKY-N 178
LLKG++ AAQ+LA MINKWPA+I +LS+ L+ I+ +L K N
Sbjct: 802 LLKGHLPAAQALASMINKWPANIGTAELSSTHELEVVIDVVLESISAVLSSCLKECKIAN 861
Query: 179 FVDGDIYCRKSV------VLGIAWVGKGLLMRGHEKVKDIVMFLLKCLVSGQNDVISSQQ 340
D ++ C + ++G+AW+GK LLMRGH+KVK+I LLKCL+S Q+ +S
Sbjct: 862 GTDDNLSCSSLISYQIHAIVGLAWLGKSLLMRGHDKVKEIAKRLLKCLLSDQDIPATSVA 921
Query: 341 HENGKVSGLDTSSVLATSAADAFHVLLNDSEDCLNKKFHATVRPLYKQRFFXXXXXXXXX 520
+ + + + S+L +AADAFH+LL DSE CLN+KFHAT+RPLYKQRFF
Sbjct: 922 KDEARDNDQNMHSLLIRAAADAFHILLTDSEVCLNRKFHATMRPLYKQRFFSSMMPVLLS 981
Query: 521 XXKESDSWNTKGALYRAFGHVISDTPLVAVVAESKKIMPTXXXXXXXXXXDVGNKDMMYS 700
KES+S T+ LYRA GH+ SDTPL AVVAE+KK++P V NK+M Y+
Sbjct: 982 SIKESNSSRTRAILYRALGHIFSDTPLAAVVAEAKKVIPALLEGLSISTLGVSNKEMTYN 1041
Query: 701 LLLILSGILMDDNGKATILENLHSVIGRLIKLISCPHFMIVRETAIQCLVAISVLPHARI 880
LLL+LSGILMD+NGK I+EN H++I LI+L+S PH M+VRETAIQCL A+S LPH RI
Sbjct: 1042 LLLVLSGILMDENGKEAIVENAHTIINHLIRLVSYPHMMLVRETAIQCLTAMSSLPHTRI 1101
Query: 881 YPFRSQVLLAVSVALDDRKRAVRQEAVRCRQAWA 982
YP R QVL A+ ++LDD KR VRQEAVRCRQAWA
Sbjct: 1102 YPMRPQVLRALVMSLDDPKRHVRQEAVRCRQAWA 1135
>ref|XP_020264905.1| MMS19 nucleotide excision repair protein homolog isoform X1
[Asparagus officinalis]
ref|XP_020264906.1| MMS19 nucleotide excision repair protein homolog isoform X1
[Asparagus officinalis]
Length = 1159
Score = 328 bits (841), Expect = e-100
Identities = 174/334 (52%), Positives = 224/334 (67%), Gaps = 7/334 (2%)
Frame = +2
Query: 2 LLKGNILAAQSLACMINKWPADIKEEQLSTICSLDQAIEEILMXXXXXXXXXXPTRKY-N 178
LLKG++ AAQ+LA MINKWPA+I +LS+ L+ I+ +L K N
Sbjct: 817 LLKGHLPAAQALASMINKWPANIGTAELSSTHELEVVIDVVLESISAVLSSCLKECKIAN 876
Query: 179 FVDGDIYCRKSV------VLGIAWVGKGLLMRGHEKVKDIVMFLLKCLVSGQNDVISSQQ 340
D ++ C + ++G+AW+GK LLMRGH+KVK+I LLKCL+S Q+ +S
Sbjct: 877 GTDDNLSCSSLISYQIHAIVGLAWLGKSLLMRGHDKVKEIAKRLLKCLLSDQDIPATSVA 936
Query: 341 HENGKVSGLDTSSVLATSAADAFHVLLNDSEDCLNKKFHATVRPLYKQRFFXXXXXXXXX 520
+ + + + S+L +AADAFH+LL DSE CLN+KFHAT+RPLYKQRFF
Sbjct: 937 KDEARDNDQNMHSLLIRAAADAFHILLTDSEVCLNRKFHATMRPLYKQRFFSSMMPVLLS 996
Query: 521 XXKESDSWNTKGALYRAFGHVISDTPLVAVVAESKKIMPTXXXXXXXXXXDVGNKDMMYS 700
KES+S T+ LYRA GH+ SDTPL AVVAE+KK++P V NK+M Y+
Sbjct: 997 SIKESNSSRTRAILYRALGHIFSDTPLAAVVAEAKKVIPALLEGLSISTLGVSNKEMTYN 1056
Query: 701 LLLILSGILMDDNGKATILENLHSVIGRLIKLISCPHFMIVRETAIQCLVAISVLPHARI 880
LLL+LSGILMD+NGK I+EN H++I LI+L+S PH M+VRETAIQCL A+S LPH RI
Sbjct: 1057 LLLVLSGILMDENGKEAIVENAHTIINHLIRLVSYPHMMLVRETAIQCLTAMSSLPHTRI 1116
Query: 881 YPFRSQVLLAVSVALDDRKRAVRQEAVRCRQAWA 982
YP R QVL A+ ++LDD KR VRQEAVRCRQAWA
Sbjct: 1117 YPMRPQVLRALVMSLDDPKRHVRQEAVRCRQAWA 1150
>ref|XP_020105725.1| MMS19 nucleotide excision repair protein homolog isoform X7 [Ananas
comosus]
Length = 978
Score = 323 bits (827), Expect = 3e-99
Identities = 178/330 (53%), Positives = 224/330 (67%), Gaps = 3/330 (0%)
Frame = +2
Query: 2 LLKGNILAAQSLACMINKWPADIKEEQLSTICSLDQAIEEIL-MXXXXXXXXXXPTRKYN 178
LL+G + AAQ+LA ++NKWP++ +LS++ + DQAI+ +L Y+
Sbjct: 655 LLEGQLPAAQALASILNKWPSNGNISELSSVYTFDQAIDLVLEKCFTVLSSSSFLANFYS 714
Query: 179 FVDGDIYCRKSVVLGIAWVGKGLLMRGHEKVKDIVMFLLKCLVSGQNDVISSQQHENGKV 358
D I + + G+AWVGKGLLMRGHEKVK+I MF LKCL+S QN I +
Sbjct: 715 SNDSKI----NAIAGLAWVGKGLLMRGHEKVKEITMFFLKCLLSSQNSEIMQLNQKE--- 767
Query: 359 SGLDTSSVLATSAADAFHVLLNDSEDCLNKKFHATVRPLYKQRFFXXXXXXXXXXXKESD 538
LD S+LATSAADAF ++++DS+ CL+K+FHAT +PLYKQRFF KE
Sbjct: 768 --LDARSLLATSAADAFQLIMSDSDVCLSKQFHATTKPLYKQRFFSSLIPVLLSSVKEYA 825
Query: 539 SWNT--KGALYRAFGHVISDTPLVAVVAESKKIMPTXXXXXXXXXXDVGNKDMMYSLLLI 712
+ NT + LYRAFGH+IS+TPL AVVAES KI+PT + NKD++YSLLL+
Sbjct: 826 TMNTNYRTVLYRAFGHLISNTPLAAVVAESHKIVPTLVDCLGILSLNTQNKDLIYSLLLV 885
Query: 713 LSGILMDDNGKATILENLHSVIGRLIKLISCPHFMIVRETAIQCLVAISVLPHARIYPFR 892
LSGILMD NGK I EN+H VI L KL+ PH M+VRETA+QCLVA+S LPH+RIYP R
Sbjct: 886 LSGILMDKNGKEHITENIHLVINLLAKLVLYPHMMLVRETALQCLVAMSGLPHSRIYPMR 945
Query: 893 SQVLLAVSVALDDRKRAVRQEAVRCRQAWA 982
QVL AV+ ALDD+K AVRQEAVRCRQAWA
Sbjct: 946 LQVLRAVTKALDDKKWAVRQEAVRCRQAWA 975
>ref|XP_019052369.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X2 [Nelumbo nucifera]
Length = 1040
Score = 323 bits (829), Expect = 5e-99
Identities = 174/342 (50%), Positives = 225/342 (65%), Gaps = 15/342 (4%)
Frame = +2
Query: 2 LLKGNILAAQSLACMINKWPADIKEEQLSTICSLDQAIEEILMXXXXXXXXXXPTRKYNF 181
+LKG++ AAQ+L +INK PA I ++S C+L++A+ I RK N
Sbjct: 690 VLKGHVPAAQALGSIINKLPATIDSVEVSRACTLEEAMVIISKMNLWSVNGNSSFRKCNV 749
Query: 182 V--------------DGDIYCRKSVVLGIAWVGKGLLMRGHEKVKDIVMFLLKCLVSGQN 319
+ + + + +V++G+AW+GKGLLMRGHEKVKDI M LL+CL+S N
Sbjct: 750 ICKSVENLTDLDISANNNAMVQTNVLVGLAWIGKGLLMRGHEKVKDITMTLLRCLLSTIN 809
Query: 320 DVISSQQHE-NGKVSGLDTSSVLATSAADAFHVLLNDSEDCLNKKFHATVRPLYKQRFFX 496
+ QH +G SG D ++ SAADAFH+L++DSE CLNK+FHATVRPLYKQ FF
Sbjct: 810 TELLPIQHGLSGNDSGQDMHPLVMKSAADAFHILMSDSEICLNKRFHATVRPLYKQHFFS 869
Query: 497 XXXXXXXXXXKESDSWNTKGALYRAFGHVISDTPLVAVVAESKKIMPTXXXXXXXXXXDV 676
SDS T+ LYRAFGHVIS+TPLVAV+ E KK++P D+
Sbjct: 870 IMMPILLSSITGSDSSITRSFLYRAFGHVISNTPLVAVITECKKLIPVLLDSLAVSSVDI 929
Query: 677 GNKDMMYSLLLILSGILMDDNGKATILENLHSVIGRLIKLISCPHFMIVRETAIQCLVAI 856
+KD+ YSLLL++SGI+MD+NG+ + EN H +I L+ L+S PH M+VRETAIQCLVA+
Sbjct: 930 LDKDLTYSLLLVISGIIMDENGREAVTENAHIIINCLVGLLSYPHMMLVRETAIQCLVAM 989
Query: 857 SVLPHARIYPFRSQVLLAVSVALDDRKRAVRQEAVRCRQAWA 982
S LPH RIYP R+QVL A+S ALDD KR VRQEAVRCRQAWA
Sbjct: 990 SGLPHVRIYPMRTQVLRAISKALDDPKRVVRQEAVRCRQAWA 1031
>ref|XP_020105724.1| MMS19 nucleotide excision repair protein homolog isoform X6 [Ananas
comosus]
Length = 1004
Score = 323 bits (827), Expect = 5e-99
Identities = 178/330 (53%), Positives = 224/330 (67%), Gaps = 3/330 (0%)
Frame = +2
Query: 2 LLKGNILAAQSLACMINKWPADIKEEQLSTICSLDQAIEEIL-MXXXXXXXXXXPTRKYN 178
LL+G + AAQ+LA ++NKWP++ +LS++ + DQAI+ +L Y+
Sbjct: 681 LLEGQLPAAQALASILNKWPSNGNISELSSVYTFDQAIDLVLEKCFTVLSSSSFLANFYS 740
Query: 179 FVDGDIYCRKSVVLGIAWVGKGLLMRGHEKVKDIVMFLLKCLVSGQNDVISSQQHENGKV 358
D I + + G+AWVGKGLLMRGHEKVK+I MF LKCL+S QN I +
Sbjct: 741 SNDSKI----NAIAGLAWVGKGLLMRGHEKVKEITMFFLKCLLSSQNSEIMQLNQKE--- 793
Query: 359 SGLDTSSVLATSAADAFHVLLNDSEDCLNKKFHATVRPLYKQRFFXXXXXXXXXXXKESD 538
LD S+LATSAADAF ++++DS+ CL+K+FHAT +PLYKQRFF KE
Sbjct: 794 --LDARSLLATSAADAFQLIMSDSDVCLSKQFHATTKPLYKQRFFSSLIPVLLSSVKEYA 851
Query: 539 SWNT--KGALYRAFGHVISDTPLVAVVAESKKIMPTXXXXXXXXXXDVGNKDMMYSLLLI 712
+ NT + LYRAFGH+IS+TPL AVVAES KI+PT + NKD++YSLLL+
Sbjct: 852 TMNTNYRTVLYRAFGHLISNTPLAAVVAESHKIVPTLVDCLGILSLNTQNKDLIYSLLLV 911
Query: 713 LSGILMDDNGKATILENLHSVIGRLIKLISCPHFMIVRETAIQCLVAISVLPHARIYPFR 892
LSGILMD NGK I EN+H VI L KL+ PH M+VRETA+QCLVA+S LPH+RIYP R
Sbjct: 912 LSGILMDKNGKEHITENIHLVINLLAKLVLYPHMMLVRETALQCLVAMSGLPHSRIYPMR 971
Query: 893 SQVLLAVSVALDDRKRAVRQEAVRCRQAWA 982
QVL AV+ ALDD+K AVRQEAVRCRQAWA
Sbjct: 972 LQVLRAVTKALDDKKWAVRQEAVRCRQAWA 1001
>ref|XP_020105723.1| MMS19 nucleotide excision repair protein homolog isoform X5 [Ananas
comosus]
Length = 1005
Score = 323 bits (827), Expect = 5e-99
Identities = 178/330 (53%), Positives = 224/330 (67%), Gaps = 3/330 (0%)
Frame = +2
Query: 2 LLKGNILAAQSLACMINKWPADIKEEQLSTICSLDQAIEEIL-MXXXXXXXXXXPTRKYN 178
LL+G + AAQ+LA ++NKWP++ +LS++ + DQAI+ +L Y+
Sbjct: 682 LLEGQLPAAQALASILNKWPSNGNISELSSVYTFDQAIDLVLEKCFTVLSSSSFLANFYS 741
Query: 179 FVDGDIYCRKSVVLGIAWVGKGLLMRGHEKVKDIVMFLLKCLVSGQNDVISSQQHENGKV 358
D I + + G+AWVGKGLLMRGHEKVK+I MF LKCL+S QN I +
Sbjct: 742 SNDSKI----NAIAGLAWVGKGLLMRGHEKVKEITMFFLKCLLSSQNSEIMQLNQKE--- 794
Query: 359 SGLDTSSVLATSAADAFHVLLNDSEDCLNKKFHATVRPLYKQRFFXXXXXXXXXXXKESD 538
LD S+LATSAADAF ++++DS+ CL+K+FHAT +PLYKQRFF KE
Sbjct: 795 --LDARSLLATSAADAFQLIMSDSDVCLSKQFHATTKPLYKQRFFSSLIPVLLSSVKEYA 852
Query: 539 SWNT--KGALYRAFGHVISDTPLVAVVAESKKIMPTXXXXXXXXXXDVGNKDMMYSLLLI 712
+ NT + LYRAFGH+IS+TPL AVVAES KI+PT + NKD++YSLLL+
Sbjct: 853 TMNTNYRTVLYRAFGHLISNTPLAAVVAESHKIVPTLVDCLGILSLNTQNKDLIYSLLLV 912
Query: 713 LSGILMDDNGKATILENLHSVIGRLIKLISCPHFMIVRETAIQCLVAISVLPHARIYPFR 892
LSGILMD NGK I EN+H VI L KL+ PH M+VRETA+QCLVA+S LPH+RIYP R
Sbjct: 913 LSGILMDKNGKEHITENIHLVINLLAKLVLYPHMMLVRETALQCLVAMSGLPHSRIYPMR 972
Query: 893 SQVLLAVSVALDDRKRAVRQEAVRCRQAWA 982
QVL AV+ ALDD+K AVRQEAVRCRQAWA
Sbjct: 973 LQVLRAVTKALDDKKWAVRQEAVRCRQAWA 1002
>ref|XP_020105721.1| MMS19 nucleotide excision repair protein homolog isoform X3 [Ananas
comosus]
Length = 1060
Score = 323 bits (827), Expect = 1e-98
Identities = 178/330 (53%), Positives = 224/330 (67%), Gaps = 3/330 (0%)
Frame = +2
Query: 2 LLKGNILAAQSLACMINKWPADIKEEQLSTICSLDQAIEEIL-MXXXXXXXXXXPTRKYN 178
LL+G + AAQ+LA ++NKWP++ +LS++ + DQAI+ +L Y+
Sbjct: 737 LLEGQLPAAQALASILNKWPSNGNISELSSVYTFDQAIDLVLEKCFTVLSSSSFLANFYS 796
Query: 179 FVDGDIYCRKSVVLGIAWVGKGLLMRGHEKVKDIVMFLLKCLVSGQNDVISSQQHENGKV 358
D I + + G+AWVGKGLLMRGHEKVK+I MF LKCL+S QN I +
Sbjct: 797 SNDSKI----NAIAGLAWVGKGLLMRGHEKVKEITMFFLKCLLSSQNSEIMQLNQKE--- 849
Query: 359 SGLDTSSVLATSAADAFHVLLNDSEDCLNKKFHATVRPLYKQRFFXXXXXXXXXXXKESD 538
LD S+LATSAADAF ++++DS+ CL+K+FHAT +PLYKQRFF KE
Sbjct: 850 --LDARSLLATSAADAFQLIMSDSDVCLSKQFHATTKPLYKQRFFSSLIPVLLSSVKEYA 907
Query: 539 SWNT--KGALYRAFGHVISDTPLVAVVAESKKIMPTXXXXXXXXXXDVGNKDMMYSLLLI 712
+ NT + LYRAFGH+IS+TPL AVVAES KI+PT + NKD++YSLLL+
Sbjct: 908 TMNTNYRTVLYRAFGHLISNTPLAAVVAESHKIVPTLVDCLGILSLNTQNKDLIYSLLLV 967
Query: 713 LSGILMDDNGKATILENLHSVIGRLIKLISCPHFMIVRETAIQCLVAISVLPHARIYPFR 892
LSGILMD NGK I EN+H VI L KL+ PH M+VRETA+QCLVA+S LPH+RIYP R
Sbjct: 968 LSGILMDKNGKEHITENIHLVINLLAKLVLYPHMMLVRETALQCLVAMSGLPHSRIYPMR 1027
Query: 893 SQVLLAVSVALDDRKRAVRQEAVRCRQAWA 982
QVL AV+ ALDD+K AVRQEAVRCRQAWA
Sbjct: 1028 LQVLRAVTKALDDKKWAVRQEAVRCRQAWA 1057
>ref|XP_010249497.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X1 [Nelumbo nucifera]
ref|XP_010249498.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X1 [Nelumbo nucifera]
Length = 1160
Score = 323 bits (829), Expect = 2e-98
Identities = 174/342 (50%), Positives = 225/342 (65%), Gaps = 15/342 (4%)
Frame = +2
Query: 2 LLKGNILAAQSLACMINKWPADIKEEQLSTICSLDQAIEEILMXXXXXXXXXXPTRKYNF 181
+LKG++ AAQ+L +INK PA I ++S C+L++A+ I RK N
Sbjct: 810 VLKGHVPAAQALGSIINKLPATIDSVEVSRACTLEEAMVIISKMNLWSVNGNSSFRKCNV 869
Query: 182 V--------------DGDIYCRKSVVLGIAWVGKGLLMRGHEKVKDIVMFLLKCLVSGQN 319
+ + + + +V++G+AW+GKGLLMRGHEKVKDI M LL+CL+S N
Sbjct: 870 ICKSVENLTDLDISANNNAMVQTNVLVGLAWIGKGLLMRGHEKVKDITMTLLRCLLSTIN 929
Query: 320 DVISSQQHE-NGKVSGLDTSSVLATSAADAFHVLLNDSEDCLNKKFHATVRPLYKQRFFX 496
+ QH +G SG D ++ SAADAFH+L++DSE CLNK+FHATVRPLYKQ FF
Sbjct: 930 TELLPIQHGLSGNDSGQDMHPLVMKSAADAFHILMSDSEICLNKRFHATVRPLYKQHFFS 989
Query: 497 XXXXXXXXXXKESDSWNTKGALYRAFGHVISDTPLVAVVAESKKIMPTXXXXXXXXXXDV 676
SDS T+ LYRAFGHVIS+TPLVAV+ E KK++P D+
Sbjct: 990 IMMPILLSSITGSDSSITRSFLYRAFGHVISNTPLVAVITECKKLIPVLLDSLAVSSVDI 1049
Query: 677 GNKDMMYSLLLILSGILMDDNGKATILENLHSVIGRLIKLISCPHFMIVRETAIQCLVAI 856
+KD+ YSLLL++SGI+MD+NG+ + EN H +I L+ L+S PH M+VRETAIQCLVA+
Sbjct: 1050 LDKDLTYSLLLVISGIIMDENGREAVTENAHIIINCLVGLLSYPHMMLVRETAIQCLVAM 1109
Query: 857 SVLPHARIYPFRSQVLLAVSVALDDRKRAVRQEAVRCRQAWA 982
S LPH RIYP R+QVL A+S ALDD KR VRQEAVRCRQAWA
Sbjct: 1110 SGLPHVRIYPMRTQVLRAISKALDDPKRVVRQEAVRCRQAWA 1151
>ref|XP_020105714.1| MMS19 nucleotide excision repair protein homolog isoform X1 [Ananas
comosus]
ref|XP_020105716.1| MMS19 nucleotide excision repair protein homolog isoform X1 [Ananas
comosus]
ref|XP_020105717.1| MMS19 nucleotide excision repair protein homolog isoform X1 [Ananas
comosus]
ref|XP_020105718.1| MMS19 nucleotide excision repair protein homolog isoform X1 [Ananas
comosus]
ref|XP_020105719.1| MMS19 nucleotide excision repair protein homolog isoform X1 [Ananas
comosus]
Length = 1139
Score = 323 bits (827), Expect = 4e-98
Identities = 178/330 (53%), Positives = 224/330 (67%), Gaps = 3/330 (0%)
Frame = +2
Query: 2 LLKGNILAAQSLACMINKWPADIKEEQLSTICSLDQAIEEIL-MXXXXXXXXXXPTRKYN 178
LL+G + AAQ+LA ++NKWP++ +LS++ + DQAI+ +L Y+
Sbjct: 816 LLEGQLPAAQALASILNKWPSNGNISELSSVYTFDQAIDLVLEKCFTVLSSSSFLANFYS 875
Query: 179 FVDGDIYCRKSVVLGIAWVGKGLLMRGHEKVKDIVMFLLKCLVSGQNDVISSQQHENGKV 358
D I + + G+AWVGKGLLMRGHEKVK+I MF LKCL+S QN I +
Sbjct: 876 SNDSKI----NAIAGLAWVGKGLLMRGHEKVKEITMFFLKCLLSSQNSEIMQLNQKE--- 928
Query: 359 SGLDTSSVLATSAADAFHVLLNDSEDCLNKKFHATVRPLYKQRFFXXXXXXXXXXXKESD 538
LD S+LATSAADAF ++++DS+ CL+K+FHAT +PLYKQRFF KE
Sbjct: 929 --LDARSLLATSAADAFQLIMSDSDVCLSKQFHATTKPLYKQRFFSSLIPVLLSSVKEYA 986
Query: 539 SWNT--KGALYRAFGHVISDTPLVAVVAESKKIMPTXXXXXXXXXXDVGNKDMMYSLLLI 712
+ NT + LYRAFGH+IS+TPL AVVAES KI+PT + NKD++YSLLL+
Sbjct: 987 TMNTNYRTVLYRAFGHLISNTPLAAVVAESHKIVPTLVDCLGILSLNTQNKDLIYSLLLV 1046
Query: 713 LSGILMDDNGKATILENLHSVIGRLIKLISCPHFMIVRETAIQCLVAISVLPHARIYPFR 892
LSGILMD NGK I EN+H VI L KL+ PH M+VRETA+QCLVA+S LPH+RIYP R
Sbjct: 1047 LSGILMDKNGKEHITENIHLVINLLAKLVLYPHMMLVRETALQCLVAMSGLPHSRIYPMR 1106
Query: 893 SQVLLAVSVALDDRKRAVRQEAVRCRQAWA 982
QVL AV+ ALDD+K AVRQEAVRCRQAWA
Sbjct: 1107 LQVLRAVTKALDDKKWAVRQEAVRCRQAWA 1136
>gb|OAY82164.1| MMS19 nucleotide excision repair protein, partial [Ananas comosus]
Length = 1172
Score = 322 bits (824), Expect = 1e-97
Identities = 179/337 (53%), Positives = 224/337 (66%), Gaps = 10/337 (2%)
Frame = +2
Query: 2 LLKGNILAAQSLACMINKWPADIKEEQLSTICSLDQAIEEIL-MXXXXXXXXXXPTRKYN 178
LL+G + AAQ+LA ++NKWP++ +LS++ + DQAI+ +L Y+
Sbjct: 766 LLEGQLPAAQALASILNKWPSNGNISELSSVYTFDQAIDLVLEKCFTVLSSSSFLANFYS 825
Query: 179 FVDGDIYCRKSVVLGIAWVGKGLLMRGHEKVKDIVMFLLKCLVSGQNDVISSQQHENGKV 358
D I + + G+AWVGKGLLMRGHEKVK+I MF LKCL+S QN I +
Sbjct: 826 SNDSKI----NAIAGLAWVGKGLLMRGHEKVKEITMFFLKCLLSSQNSEIMQLNQKE--- 878
Query: 359 SGLDTSSVLATSAADAFHVLLNDSEDCLNKKFHATVRPLYKQRFFXXXXXXXXXXXKESD 538
LD S+LATSAADAF ++++DS+ CL+KKFHAT +PLYKQRFF KE
Sbjct: 879 --LDARSLLATSAADAFQLIMSDSDVCLSKKFHATTKPLYKQRFFSSLIPVLLSSVKEYA 936
Query: 539 SWNTK---------GALYRAFGHVISDTPLVAVVAESKKIMPTXXXXXXXXXXDVGNKDM 691
+ NTK LYRAFGH+IS+TPL AVVAES KI+PT + NKD+
Sbjct: 937 TMNTKYTSVIPDYRTVLYRAFGHLISNTPLAAVVAESHKIVPTLVDCLGILSLNTQNKDL 996
Query: 692 MYSLLLILSGILMDDNGKATILENLHSVIGRLIKLISCPHFMIVRETAIQCLVAISVLPH 871
+YSLLL+LSGILMD NGK I EN+H VI L KL+ PH M+VRETA+QCLVA+S LPH
Sbjct: 997 IYSLLLVLSGILMDKNGKEHITENIHLVINLLAKLVLYPHMMLVRETALQCLVAMSGLPH 1056
Query: 872 ARIYPFRSQVLLAVSVALDDRKRAVRQEAVRCRQAWA 982
+RIYP R QVL AV+ ALDD+K AVRQEAVRCRQAW+
Sbjct: 1057 SRIYPMRLQVLRAVTKALDDKKWAVRQEAVRCRQAWS 1093
>gb|OVA08536.1| RNAPII transcription regulator C-terminal [Macleaya cordata]
Length = 1187
Score = 313 bits (802), Expect = 2e-94
Identities = 170/341 (49%), Positives = 225/341 (65%), Gaps = 15/341 (4%)
Frame = +2
Query: 2 LLKGNILAAQSLACMINKWPADIKEEQLSTICSLDQAIEEILMXXXXXXXXXXPTRKYNF 181
LLKG++ AAQ+L + NK P +I ++S+ C+L++A++ I P+RK +
Sbjct: 807 LLKGHVPAAQALGSITNKLPLNINSVEVSSACTLEEAMDVIFNMGLQSASDSGPSRKGSA 866
Query: 182 VDG-DI----YC---------RKSVVLGIAWVGKGLLMRGHEKVKDIVMFLLKCLV-SGQ 316
+DG D+ +C + + V+G+AW+GKGLLMRGHEK+KD+VM LL+CL+ +G
Sbjct: 867 MDGGDVGLIDFCLNVGNSSLTQTNAVVGLAWIGKGLLMRGHEKLKDVVMILLRCLLLTGS 926
Query: 317 NDVISSQQHENGKVSGLDTSSVLATSAADAFHVLLNDSEDCLNKKFHATVRPLYKQRFFX 496
+ QQ G+ D + SAADAF VLL+DS CLNK+FHAT++PLYKQ FF
Sbjct: 927 VSPLPLQQDMLGECKEQDMHPTVIRSAADAFDVLLSDSNVCLNKRFHATIKPLYKQHFFY 986
Query: 497 XXXXXXXXXXKESDSWNTKGALYRAFGHVISDTPLVAVVAESKKIMPTXXXXXXXXXXDV 676
K+SDS T+ LYRAFGHVIS+TPL AVV E+K+++ DV
Sbjct: 987 TMMPILLSSIKDSDSSTTRSMLYRAFGHVISNTPLAAVVTEAKRVIFALLDALPMLSLDV 1046
Query: 677 GNKDMMYSLLLILSGILMDDNGKATILENLHSVIGRLIKLISCPHFMIVRETAIQCLVAI 856
+KD+ YSLLL+LSGI+MD++G+ + EN H +I RLI LIS M+VRETAIQCLVA+
Sbjct: 1047 RDKDLTYSLLLVLSGIIMDESGREAVTENAHIIINRLIGLISYRQMMLVRETAIQCLVAV 1106
Query: 857 SVLPHARIYPFRSQVLLAVSVALDDRKRAVRQEAVRCRQAW 979
S LPH RIYP R+QVL A+S ALDD KR VRQEA RCRQAW
Sbjct: 1107 SGLPHTRIYPMRTQVLQAISKALDDPKRIVRQEAGRCRQAW 1147
>gb|POE98687.1| mms19 nucleotide excision repair protein like [Quercus suber]
Length = 729
Score = 294 bits (752), Expect = 3e-90
Identities = 159/340 (46%), Positives = 215/340 (63%), Gaps = 13/340 (3%)
Frame = +2
Query: 2 LLKGNILAAQSLACMINKWPADIKEEQLSTICSLDQAIEEI-------------LMXXXX 142
LLKG++ AAQ+L ++NK+ ++S+ C+L++A++ I L+
Sbjct: 382 LLKGHVPAAQALGSIVNKFGKSSTGSEISSDCTLEEALDIIFQLKLWTHQDNGALLRCSV 441
Query: 143 XXXXXXPTRKYNFVDGDIYCRKSVVLGIAWVGKGLLMRGHEKVKDIVMFLLKCLVSGQND 322
T V + +K + G++W+GKGLL+RGH+KVKD+ M L+CL+S N
Sbjct: 442 NGSEMGHTDLCQAVVNNKLPQKLAITGLSWIGKGLLLRGHDKVKDVTMIFLECLLSNGN- 500
Query: 323 VISSQQHENGKVSGLDTSSVLATSAADAFHVLLNDSEDCLNKKFHATVRPLYKQRFFXXX 502
+ QH D + + SAADAF +L++DSE CLN+KFHA +RPLYKQRFF
Sbjct: 501 ALPLSQHSLENSCEQDLRASVMKSAADAFRILMSDSEVCLNRKFHAIIRPLYKQRFFSTM 560
Query: 503 XXXXXXXXKESDSWNTKGALYRAFGHVISDTPLVAVVAESKKIMPTXXXXXXXXXXDVGN 682
+SDS ++ LYRAF H+IS+TPLVAV+ E+KK++P D +
Sbjct: 561 MPILQPLIMKSDSLLSRSMLYRAFAHIISETPLVAVLGEAKKLIPILLDCLSTLNKDAQD 620
Query: 683 KDMMYSLLLILSGILMDDNGKATILENLHSVIGRLIKLISCPHFMIVRETAIQCLVAISV 862
KD +YSLLL+LSGIL D +G+ +++N H VI L LI+ PH M+VRETAIQCLVA+S
Sbjct: 621 KDTLYSLLLVLSGILTDKDGQEAVVDNAHLVINCLTGLIAYPHMMLVRETAIQCLVAMSE 680
Query: 863 LPHARIYPFRSQVLLAVSVALDDRKRAVRQEAVRCRQAWA 982
LPHARIYP R QVL A+S ALDD +RAVRQEAVRCRQAWA
Sbjct: 681 LPHARIYPMRIQVLQAISKALDDSRRAVRQEAVRCRQAWA 720
>ref|XP_006853692.3| MMS19 nucleotide excision repair protein homolog isoform X2
[Amborella trichopoda]
gb|ERN15159.1| hypothetical protein AMTR_s00056p00136660 [Amborella trichopoda]
Length = 1160
Score = 299 bits (766), Expect = 2e-89
Identities = 160/338 (47%), Positives = 215/338 (63%), Gaps = 11/338 (3%)
Frame = +2
Query: 2 LLKGNILAAQSLACMINKWPADIKEEQLSTICSLDQAIEEILMXXXXXXXXXXPTRKYNF 181
LLKG+ +AQ+L ++NKWP +K ++S C+L +A++ ++ +K+
Sbjct: 816 LLKGDEASAQALGSIVNKWP--VKSNEVSGACTLGEAMDIMVERGFRPIIFNVNQKKHED 873
Query: 182 VDGDIYC----------RKSVVLGIAWVGKGLLMRGHEKVKDIVMFLLKCLV-SGQNDVI 328
VD + R + G+AW+GKGL+MRGHEKVKDI + LL C++ +G +
Sbjct: 874 VDNNKEIVSHLPISNDSRVHALFGLAWIGKGLVMRGHEKVKDITLLLLSCVLPTGGMRSM 933
Query: 329 SSQQHENGKVSGLDTSSVLATSAADAFHVLLNDSEDCLNKKFHATVRPLYKQRFFXXXXX 508
SQ G G + +A SAADAFH++++DSE +N+KFHAT+RPLYKQRF
Sbjct: 934 PSQHDVLGNDGGESINIAVARSAADAFHIIMSDSETSVNQKFHATIRPLYKQRFCSTVMP 993
Query: 509 XXXXXXKESDSWNTKGALYRAFGHVISDTPLVAVVAESKKIMPTXXXXXXXXXXDVGNKD 688
KES S TK L+R FGH+I TPL A++ E+ KI+P DV NKD
Sbjct: 994 ILLSSIKESHSSITKSMLFRTFGHIIIGTPLAAILIEAPKIVPPLLDGLSMLTLDVQNKD 1053
Query: 689 MMYSLLLILSGILMDDNGKATILENLHSVIGRLIKLISCPHFMIVRETAIQCLVAISVLP 868
+Y LL++LSGILMD+ GK ++EN H++IG L KL++ PH MIVRETAIQCLVA++ LP
Sbjct: 1054 QIYDLLVVLSGILMDETGKEAVVENAHTIIGCLSKLVTYPHLMIVRETAIQCLVAMAALP 1113
Query: 869 HARIYPFRSQVLLAVSVALDDRKRAVRQEAVRCRQAWA 982
HARIYP R QVL VS ALDD+KR+VRQEAVRC WA
Sbjct: 1114 HARIYPMRLQVLETVSKALDDQKRSVRQEAVRCHHVWA 1151
>ref|XP_020528710.1| MMS19 nucleotide excision repair protein homolog isoform X1
[Amborella trichopoda]
Length = 1162
Score = 299 bits (766), Expect = 2e-89
Identities = 160/338 (47%), Positives = 215/338 (63%), Gaps = 11/338 (3%)
Frame = +2
Query: 2 LLKGNILAAQSLACMINKWPADIKEEQLSTICSLDQAIEEILMXXXXXXXXXXPTRKYNF 181
LLKG+ +AQ+L ++NKWP +K ++S C+L +A++ ++ +K+
Sbjct: 818 LLKGDEASAQALGSIVNKWP--VKSNEVSGACTLGEAMDIMVERGFRPIIFNVNQKKHED 875
Query: 182 VDGDIYC----------RKSVVLGIAWVGKGLLMRGHEKVKDIVMFLLKCLV-SGQNDVI 328
VD + R + G+AW+GKGL+MRGHEKVKDI + LL C++ +G +
Sbjct: 876 VDNNKEIVSHLPISNDSRVHALFGLAWIGKGLVMRGHEKVKDITLLLLSCVLPTGGMRSM 935
Query: 329 SSQQHENGKVSGLDTSSVLATSAADAFHVLLNDSEDCLNKKFHATVRPLYKQRFFXXXXX 508
SQ G G + +A SAADAFH++++DSE +N+KFHAT+RPLYKQRF
Sbjct: 936 PSQHDVLGNDGGESINIAVARSAADAFHIIMSDSETSVNQKFHATIRPLYKQRFCSTVMP 995
Query: 509 XXXXXXKESDSWNTKGALYRAFGHVISDTPLVAVVAESKKIMPTXXXXXXXXXXDVGNKD 688
KES S TK L+R FGH+I TPL A++ E+ KI+P DV NKD
Sbjct: 996 ILLSSIKESHSSITKSMLFRTFGHIIIGTPLAAILIEAPKIVPPLLDGLSMLTLDVQNKD 1055
Query: 689 MMYSLLLILSGILMDDNGKATILENLHSVIGRLIKLISCPHFMIVRETAIQCLVAISVLP 868
+Y LL++LSGILMD+ GK ++EN H++IG L KL++ PH MIVRETAIQCLVA++ LP
Sbjct: 1056 QIYDLLVVLSGILMDETGKEAVVENAHTIIGCLSKLVTYPHLMIVRETAIQCLVAMAALP 1115
Query: 869 HARIYPFRSQVLLAVSVALDDRKRAVRQEAVRCRQAWA 982
HARIYP R QVL VS ALDD+KR+VRQEAVRC WA
Sbjct: 1116 HARIYPMRLQVLETVSKALDDQKRSVRQEAVRCHHVWA 1153