BLASTX nr result

ID: Cheilocostus21_contig00024689 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00024689
         (627 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018677950.1| PREDICTED: F-box/LRR-repeat protein At3g5890...   143   2e-37
ref|XP_009388891.1| PREDICTED: F-box/LRR-repeat protein At3g5890...   140   5e-36
ref|XP_008795788.1| PREDICTED: F-box protein At4g22280 isoform X...    73   2e-11
ref|XP_008795787.1| PREDICTED: F-box/LRR-repeat protein At4g1410...    73   2e-11

>ref|XP_018677950.1| PREDICTED: F-box/LRR-repeat protein At3g58900-like isoform X2 [Musa
           acuminata subsp. malaccensis]
          Length = 410

 Score =  143 bits (361), Expect = 2e-37
 Identities = 83/175 (47%), Positives = 101/175 (57%), Gaps = 6/175 (3%)
 Frame = +1

Query: 1   PKLQRFNYTSGKTQGCFIYDMFNLVDARIVLFNLTHPNSS---WSVCNILMGXXXXXXXX 171
           PKL  F+YTSGK QGCFI DM NLVDA IVLFNL+  NSS   WSV  I  G        
Sbjct: 228 PKLLSFHYTSGKAQGCFIRDMANLVDASIVLFNLSLQNSSVRAWSVSEIFKGLSHASSLT 287

Query: 172 XXXXGNQLFTVRHXXXXXXXXXXXXXXXNIFFSDHYLGTIAYMLKHMPALKTLEIYNKL- 348
               GNQL    H               NI FS   +  IAYMLKHMP L+ L ++N+L 
Sbjct: 288 ITYLGNQLSVEEHLQYLPIFLNLKYLRLNILFSRECMEAIAYMLKHMPDLEILVVHNELV 347

Query: 349 --SSPEESVRWVSKHLIEGTLNCVESIRLGNFESSDKEAEIVEFLMRNGKIIEDN 507
             S  EE + W SK L  G LN ++ I+LGNF SS+ E E +EFL++NG+I +D+
Sbjct: 348 WYSIIEEHIWWTSKELTGGMLNRLKEIQLGNFGSSNHETEFIEFLVKNGRIAQDH 402


>ref|XP_009388891.1| PREDICTED: F-box/LRR-repeat protein At3g58900-like isoform X1 [Musa
           acuminata subsp. malaccensis]
 ref|XP_009388893.1| PREDICTED: F-box/LRR-repeat protein At3g58900-like isoform X1 [Musa
           acuminata subsp. malaccensis]
 ref|XP_018677949.1| PREDICTED: F-box/LRR-repeat protein At3g58900-like isoform X1 [Musa
           acuminata subsp. malaccensis]
          Length = 411

 Score =  140 bits (352), Expect = 5e-36
 Identities = 83/176 (47%), Positives = 102/176 (57%), Gaps = 7/176 (3%)
 Frame = +1

Query: 1   PKLQRFNYTSGKTQGCFIYDMFNLVDARIVLFNLTHPNSS---WSVCNILMGXXXXXXXX 171
           PKL  F+YTSGK QGCFI DM NLVDA IVLFNL+  NSS   WSV  I  G        
Sbjct: 228 PKLLSFHYTSGKAQGCFIRDMANLVDASIVLFNLSLQNSSVRAWSVSEIFKGLSHASSLT 287

Query: 172 XXXXGNQLFTV-RHXXXXXXXXXXXXXXXNIFFSDHYLGTIAYMLKHMPALKTLEIYNKL 348
               GNQ  +V  H               NI FS   +  IAYMLKHMP L+ L ++N+L
Sbjct: 288 ITYLGNQQLSVEEHLQYLPIFLNLKYLRLNILFSRECMEAIAYMLKHMPDLEILVVHNEL 347

Query: 349 ---SSPEESVRWVSKHLIEGTLNCVESIRLGNFESSDKEAEIVEFLMRNGKIIEDN 507
              S  EE + W SK L  G LN ++ I+LGNF SS+ E E +EFL++NG+I +D+
Sbjct: 348 VWYSIIEEHIWWTSKELTGGMLNRLKEIQLGNFGSSNHETEFIEFLVKNGRIAQDH 403


>ref|XP_008795788.1| PREDICTED: F-box protein At4g22280 isoform X2 [Phoenix dactylifera]
          Length = 427

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 11/170 (6%)
 Frame = +1

Query: 1   PKLQRFNYTSGKTQGCFIYDMFNLVDARIVLFNLTH----PNSSWSVCNILMGXXXXXXX 168
           PKL   NY+SGK QGC+++D+  LVDA ++LFNL +     +  WS+   L G       
Sbjct: 136 PKLLSLNYSSGKAQGCYLHDISTLVDASLMLFNLEYSGLQSSKRWSIDETLRGLSSVKSL 195

Query: 169 XXXXXGNQLFTVRH--XXXXXXXXXXXXXXXNIFFSDHYLGTIAYMLKHMPALKTLEIYN 342
                G +  ++                   N+  +  +L  I+YML HMP L TL I N
Sbjct: 196 TLTYLGAKHLSLEGHLLGRLPMFHNMKYLKLNLVLTGAHLQAISYMLTHMPNLDTLVIRN 255

Query: 343 KLSS----PEESVR-WVSKHLIEGTLNCVESIRLGNFESSDKEAEIVEFL 477
           ++ S     EE +  W S +      + +  I L NFES+++E + +  L
Sbjct: 256 EVFSLRPMREEKISCWTSAN------HGIRQIELQNFESNEQERQFISVL 299


>ref|XP_008795787.1| PREDICTED: F-box/LRR-repeat protein At4g14103 isoform X1 [Phoenix
           dactylifera]
 ref|XP_017699370.1| PREDICTED: F-box/LRR-repeat protein At4g14103 isoform X1 [Phoenix
           dactylifera]
          Length = 516

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 11/170 (6%)
 Frame = +1

Query: 1   PKLQRFNYTSGKTQGCFIYDMFNLVDARIVLFNLTH----PNSSWSVCNILMGXXXXXXX 168
           PKL   NY+SGK QGC+++D+  LVDA ++LFNL +     +  WS+   L G       
Sbjct: 225 PKLLSLNYSSGKAQGCYLHDISTLVDASLMLFNLEYSGLQSSKRWSIDETLRGLSSVKSL 284

Query: 169 XXXXXGNQLFTVRH--XXXXXXXXXXXXXXXNIFFSDHYLGTIAYMLKHMPALKTLEIYN 342
                G +  ++                   N+  +  +L  I+YML HMP L TL I N
Sbjct: 285 TLTYLGAKHLSLEGHLLGRLPMFHNMKYLKLNLVLTGAHLQAISYMLTHMPNLDTLVIRN 344

Query: 343 KLSS----PEESVR-WVSKHLIEGTLNCVESIRLGNFESSDKEAEIVEFL 477
           ++ S     EE +  W S +      + +  I L NFES+++E + +  L
Sbjct: 345 EVFSLRPMREEKISCWTSAN------HGIRQIELQNFESNEQERQFISVL 388


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