BLASTX nr result

ID: Cheilocostus21_contig00024321 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00024321
         (554 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009406706.1| PREDICTED: protein TIFY 5A-like [Musa acumin...    52   6e-06
ref|XP_009418985.1| PREDICTED: protein TIFY 5A-like [Musa acumin...    54   1e-05

>ref|XP_009406706.1| PREDICTED: protein TIFY 5A-like [Musa acuminata subsp. malaccensis]
          Length = 149

 Score = 51.6 bits (122), Expect(2) = 6e-06
 Identities = 30/52 (57%), Positives = 38/52 (73%)
 Frame = -2

Query: 322 SGSALHQPPAPALSPQAIPQLLNPGLSMKRSLQRFLQIMKRRAFVRHLVPCS 167
           S S+L +PP    SP+ +PQ+LNPGLSMKRSLQRFLQ  KR+A +  + P S
Sbjct: 89  STSSLPRPP----SPRPMPQMLNPGLSMKRSLQRFLQ--KRKARMNDVSPYS 134



 Score = 26.2 bits (56), Expect(2) = 6e-06
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = -1

Query: 467 QNKQQMTILHNGRDCV 420
           +N+QQMTI ++GR CV
Sbjct: 36  RNQQQMTIFYDGRVCV 51


>ref|XP_009418985.1| PREDICTED: protein TIFY 5A-like [Musa acuminata subsp. malaccensis]
          Length = 147

 Score = 53.5 bits (127), Expect = 1e-05
 Identities = 29/44 (65%), Positives = 34/44 (77%)
 Frame = -2

Query: 304 QPPAPALSPQAIPQLLNPGLSMKRSLQRFLQIMKRRAFVRHLVP 173
           QP AP   PQA+PQ+LNPGLSMKRSLQRFLQ  KR+A +  + P
Sbjct: 91  QPTAPP-PPQAVPQILNPGLSMKRSLQRFLQ--KRKARISDVSP 131


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