BLASTX nr result

ID: Cheilocostus21_contig00024206 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00024206
         (702 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009411534.1| PREDICTED: pentatricopeptide repeat-containi...   109   9e-24
ref|XP_008778298.1| PREDICTED: pentatricopeptide repeat-containi...    78   8e-13
ref|XP_019707116.1| PREDICTED: pentatricopeptide repeat-containi...    74   1e-11

>ref|XP_009411534.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g55630-like [Musa acuminata subsp. malaccensis]
          Length = 536

 Score =  109 bits (272), Expect = 9e-24
 Identities = 73/171 (42%), Positives = 91/171 (53%), Gaps = 2/171 (1%)
 Frame = -1

Query: 507 MRSIIIFGRRSGKIVYGSYLCVRPSSGLCNNGGGQDKVLSTHSDENFDLGPIGCPSGGAR 328
           MRSI++ G RSG+I+ GS L V PS  LC+N  G+D      S +  D G +G      R
Sbjct: 1   MRSIVLLGHRSGRILSGSCLWVWPSRSLCSNQCGKDDGFPKDSSKKVDPGHLGISPERVR 60

Query: 327 EDNQADASRGAEKRQTPAEKKFGRVDXXXXXXXXXXXXXXXXESLDCERLPEEAILCFSS 148
            D +A  S+ AE+R   A+ KF                    E L+C  LPEE +L FS 
Sbjct: 61  RDKEAFPSKDAEERLDFADNKF-------------DFGGNNEEELECGHLPEETLLGFSI 107

Query: 147 GGSXXXXXXXXXDR--NINHRQKFKEEIKAEADRVIEILQQDGPGFNVWAA 1
           GG+         DR  NIN R++F E  KAEADRV EILQQDGP FNV +A
Sbjct: 108 GGTDTADDDDQSDRCGNINPRRRFIEGNKAEADRVFEILQQDGPAFNVRSA 158


>ref|XP_008778298.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like [Phoenix dactylifera]
 ref|XP_008778299.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like [Phoenix dactylifera]
          Length = 560

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 57/183 (31%), Positives = 78/183 (42%), Gaps = 18/183 (9%)
 Frame = -1

Query: 507 MRSIIIFGRRSGKIVYGSYLCVRPSSGLCNNGGGQDKVLSTHSDENFDLG---------- 358
           MRS I+F  R GK   GS   + PS GLCNNG   D+  S  +DE  DLG          
Sbjct: 1   MRSTILFCSRYGKFFSGSRTRIWPSMGLCNNGSRADEENSKDTDERLDLGHLHNGSQTQN 60

Query: 357 --------PIGCPSGGAREDNQADASRGAEKRQTPAEKKFGRVDXXXXXXXXXXXXXXXX 202
                    +G    G++  +  D+    +    P E                       
Sbjct: 61  LKDNSERLDLGHLHDGSKIQDAKDSGEKLDLGHLPDESNRESGPNKADNHDHSGHPKDND 120

Query: 201 ESLDCERLPEEAILCFSSGGSXXXXXXXXXDRNINHRQKFKEEIKAEADRVIEILQQDGP 22
           E  DCE L +E  L FS  G+           ++N R++F E +K+ AD+V +ILQQDGP
Sbjct: 121 ERFDCEHLSQETFLKFSPEGADGDDHD-----DLNIRRRFLEGVKSNADQVFQILQQDGP 175

Query: 21  GFN 13
           GF+
Sbjct: 176 GFD 178


>ref|XP_019707116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like [Elaeis guineensis]
 ref|XP_019707117.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like [Elaeis guineensis]
 ref|XP_019707118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like [Elaeis guineensis]
          Length = 561

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 57/184 (30%), Positives = 78/184 (42%), Gaps = 19/184 (10%)
 Frame = -1

Query: 507 MRSIIIFGRRSGKIVYGSYLCVRPSSGLCNNGGGQDKVLSTHSDENFDLG---------- 358
           MRS ++FG R GKI   S   + PS GL NNG   D+  S  +DE  D G          
Sbjct: 1   MRSTVLFGPRYGKIYSRSRTRIWPSMGLYNNGNRADEEDSKDTDEKLDAGNLHNGSQTQN 60

Query: 357 --------PIGCPSGGAREDNQADASRGAEKRQTPAEKKF-GRVDXXXXXXXXXXXXXXX 205
                    +G    G++  N  D     +    P E       D               
Sbjct: 61  LKDNGEKLDLGHLHDGSKTQNSEDNDEKLDLGHLPDESNLEPSPDKAEDSHDHSGHPKDN 120

Query: 204 XESLDCERLPEEAILCFSSGGSXXXXXXXXXDRNINHRQKFKEEIKAEADRVIEILQQDG 25
            E+ DCE LP+E +L FS                +N R++F E +K++AD+V +ILQQDG
Sbjct: 121 DETFDCEHLPQETLLKFS-----PEKVNGDDHDYLNTRRRFIEGVKSKADQVFQILQQDG 175

Query: 24  PGFN 13
           PGF+
Sbjct: 176 PGFD 179


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