BLASTX nr result
ID: Cheilocostus21_contig00023864
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00023864
(497 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009397530.1| PREDICTED: RNA polymerase sigma factor sigF,... 129 2e-43
ref|XP_010907040.1| PREDICTED: RNA polymerase sigma factor sigF,... 117 1e-35
ref|XP_009384040.1| PREDICTED: RNA polymerase sigma factor sigF,... 111 4e-32
ref|XP_008779218.1| PREDICTED: RNA polymerase sigma factor sigF,... 108 4e-32
ref|XP_008807704.1| PREDICTED: RNA polymerase sigma factor sigF,... 108 4e-32
ref|XP_010241843.1| PREDICTED: RNA polymerase sigma factor sigF,... 103 2e-29
ref|XP_010241844.1| PREDICTED: RNA polymerase sigma factor sigF,... 103 2e-29
ref|XP_010241845.1| PREDICTED: RNA polymerase sigma factor sigF,... 103 2e-29
ref|XP_010241846.1| PREDICTED: RNA polymerase sigma factor sigF,... 103 2e-29
ref|XP_020261344.1| RNA polymerase sigma factor sigF, chloroplas... 98 7e-28
ref|XP_020085184.1| RNA polymerase sigma factor sigF, chloroplas... 105 1e-27
gb|AKC88770.1| sigma factor [Francoa sonchifolia] 101 1e-27
ref|XP_015898520.1| PREDICTED: RNA polymerase sigma factor sigF,... 99 4e-27
gb|OVA18028.1| RNA polymerase sigma-70 [Macleaya cordata] 100 7e-27
ref|XP_021897328.1| RNA polymerase sigma factor sigF, chloroplas... 101 7e-27
gb|KMZ57346.1| RNA polymerase sigma-70 factor [Zostera marina] 107 1e-26
ref|XP_018812494.1| PREDICTED: RNA polymerase sigma factor sigF,... 102 1e-26
ref|XP_018858062.1| PREDICTED: RNA polymerase sigma factor sigF,... 102 2e-26
ref|XP_018858063.1| PREDICTED: RNA polymerase sigma factor sigF,... 102 2e-26
emb|CDP06761.1| unnamed protein product [Coffea canephora] 99 2e-26
>ref|XP_009397530.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
[Musa acuminata subsp. malaccensis]
Length = 201
Score = 129 bits (323), Expect(2) = 2e-43
Identities = 61/86 (70%), Positives = 79/86 (91%), Gaps = 1/86 (1%)
Frame = +2
Query: 218 PELVIAKQLMRQHLRRLLKTLKPKESQIVQYRFGMYGNKKKTLTEIGEIYGMSNERVRQI 397
P+L++AKQLMRQH+R +LKTLKPKE +I+QYRFGM+ NKKKTL+EIG+IYG+SNER+RQ+
Sbjct: 116 PDLIVAKQLMRQHVRDILKTLKPKERKIIQYRFGMHENKKKTLSEIGDIYGLSNERIRQL 175
Query: 398 ENQALNKLKV-CLPSQGLAAYRNLLL 472
E++ALNKLK CL +QGL AYR+LL+
Sbjct: 176 ESRALNKLKEWCLTTQGLKAYRDLLV 201
Score = 74.7 bits (182), Expect(2) = 2e-43
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = +1
Query: 1 KYARRLCMQEGHPVTDEEIAKRVGITVKKLQKLLVTFRDPVSIYERYLQDV 153
KYARRLC+QEG T+EEIAKRVGITVKKL+KLL+ FRDPVSI E Q+V
Sbjct: 52 KYARRLCIQEGRLPTNEEIAKRVGITVKKLEKLLLYFRDPVSIQEHAWQNV 102
>ref|XP_010907040.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Elaeis
guineensis]
Length = 570
Score = 117 bits (292), Expect(2) = 1e-35
Identities = 56/85 (65%), Positives = 72/85 (84%)
Frame = +2
Query: 218 PELVIAKQLMRQHLRRLLKTLKPKESQIVQYRFGMYGNKKKTLTEIGEIYGMSNERVRQI 397
PEL IAKQ+MRQH+R LL+ LKP+E QI+QYRFG+ N++K+LTEIG ++G+S ERVRQ+
Sbjct: 486 PELSIAKQMMRQHVRGLLRILKPRERQIIQYRFGIPNNEQKSLTEIGAMFGLSKERVRQL 545
Query: 398 ENQALNKLKVCLPSQGLAAYRNLLL 472
E++AL+KLK CLPS GL AY LLL
Sbjct: 546 ESRALDKLKGCLPSHGLGAYLELLL 570
Score = 60.5 bits (145), Expect(2) = 1e-35
Identities = 30/45 (66%), Positives = 38/45 (84%)
Frame = +1
Query: 1 KYARRLCMQEGHPVTDEEIAKRVGITVKKLQKLLVTFRDPVSIYE 135
K ARRL +QEGH T+EEIAKRVGI+V+KL+ LL+T R+P+SI E
Sbjct: 420 KNARRLFIQEGHAPTNEEIAKRVGISVEKLEALLLTTRNPISIQE 464
>ref|XP_009384040.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Musa
acuminata subsp. malaccensis]
Length = 577
Score = 111 bits (278), Expect(2) = 4e-32
Identities = 54/85 (63%), Positives = 71/85 (83%)
Frame = +2
Query: 218 PELVIAKQLMRQHLRRLLKTLKPKESQIVQYRFGMYGNKKKTLTEIGEIYGMSNERVRQI 397
P+LVIAKQ+MRQH+R LL LKP+E IVQYRFG+ +++K+L+EIG +YG+S ERVRQ+
Sbjct: 493 PDLVIAKQMMRQHVRNLLNILKPRERVIVQYRFGIRCSEQKSLSEIGAMYGLSKERVRQL 552
Query: 398 ENQALNKLKVCLPSQGLAAYRNLLL 472
E+QAL KL+ CL SQGL AY +LL+
Sbjct: 553 ESQALGKLRKCLQSQGLEAYLDLLI 577
Score = 54.3 bits (129), Expect(2) = 4e-32
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +1
Query: 7 ARRLCMQEGHPVTDEEIAKRVGITVKKLQKLLVTFRDPVSI 129
ARRLC+QEG T+EEIAKRVGITV+KL+ LL+ R P+SI
Sbjct: 429 ARRLCIQEGLLPTNEEIAKRVGITVQKLEILLLNSRYPISI 469
>ref|XP_008779218.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
[Phoenix dactylifera]
Length = 529
Score = 108 bits (271), Expect(2) = 4e-32
Identities = 53/85 (62%), Positives = 69/85 (81%)
Frame = +2
Query: 218 PELVIAKQLMRQHLRRLLKTLKPKESQIVQYRFGMYGNKKKTLTEIGEIYGMSNERVRQI 397
P+L +AKQ+MRQH+R LL+ LKP+E QI+QYRFG+ NK K+LTEIG ++G+S ERVRQ+
Sbjct: 445 PDLSMAKQMMRQHVRGLLRILKPRERQIIQYRFGIPNNKPKSLTEIGVMFGLSKERVRQL 504
Query: 398 ENQALNKLKVCLPSQGLAAYRNLLL 472
E++AL+KLK C S GL AY LLL
Sbjct: 505 ESRALDKLKDCRLSHGLGAYLELLL 529
Score = 57.0 bits (136), Expect(2) = 4e-32
Identities = 28/45 (62%), Positives = 38/45 (84%)
Frame = +1
Query: 1 KYARRLCMQEGHPVTDEEIAKRVGITVKKLQKLLVTFRDPVSIYE 135
K ARRL +QEGH T+EEIAK+VGI+V++L+ LL+T R+P+SI E
Sbjct: 379 KKARRLFIQEGHAPTNEEIAKQVGISVERLKVLLLTTRNPISIQE 423
>ref|XP_008807704.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
[Phoenix dactylifera]
Length = 466
Score = 108 bits (271), Expect(2) = 4e-32
Identities = 53/85 (62%), Positives = 69/85 (81%)
Frame = +2
Query: 218 PELVIAKQLMRQHLRRLLKTLKPKESQIVQYRFGMYGNKKKTLTEIGEIYGMSNERVRQI 397
P+L +AKQ+MRQH+R LL+ LKP+E QI+QYRFG+ NK K+LTEIG ++G+S ERVRQ+
Sbjct: 382 PDLSMAKQMMRQHVRGLLRILKPRERQIIQYRFGIPNNKPKSLTEIGVMFGLSKERVRQL 441
Query: 398 ENQALNKLKVCLPSQGLAAYRNLLL 472
E++AL+KLK C S GL AY LLL
Sbjct: 442 ESRALDKLKDCRLSHGLGAYLELLL 466
Score = 57.0 bits (136), Expect(2) = 4e-32
Identities = 28/45 (62%), Positives = 38/45 (84%)
Frame = +1
Query: 1 KYARRLCMQEGHPVTDEEIAKRVGITVKKLQKLLVTFRDPVSIYE 135
K ARRL +QEGH T+EEIAK+VGI+V++L+ LL+T R+P+SI E
Sbjct: 316 KKARRLFIQEGHAPTNEEIAKQVGISVERLKVLLLTTRNPISIQE 360
>ref|XP_010241843.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X1 [Nelumbo nucifera]
Length = 568
Score = 103 bits (257), Expect(2) = 2e-29
Identities = 48/85 (56%), Positives = 68/85 (80%)
Frame = +2
Query: 218 PELVIAKQLMRQHLRRLLKTLKPKESQIVQYRFGMYGNKKKTLTEIGEIYGMSNERVRQI 397
P+L +AKQLMR+H+R L+ L PKE +I++ R+G+ N+ K+L EIG I+G+S ERVRQ+
Sbjct: 484 PDLCVAKQLMRRHVRNLISILPPKERRIIRMRYGIENNEPKSLQEIGSIFGLSKERVRQL 543
Query: 398 ENQALNKLKVCLPSQGLAAYRNLLL 472
E++AL+KLK CL SQGL AY +LL+
Sbjct: 544 ESRALHKLKQCLSSQGLGAYADLLV 568
Score = 53.1 bits (126), Expect(2) = 2e-29
Identities = 25/45 (55%), Positives = 37/45 (82%)
Frame = +1
Query: 1 KYARRLCMQEGHPVTDEEIAKRVGITVKKLQKLLVTFRDPVSIYE 135
K A++L +QEGH T+EE+AKRVGITV+KL++L ++ R P+SI +
Sbjct: 418 KKAKKLFIQEGHHPTNEELAKRVGITVEKLERLFMSTRMPLSIQQ 462
>ref|XP_010241844.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X2 [Nelumbo nucifera]
Length = 565
Score = 103 bits (257), Expect(2) = 2e-29
Identities = 48/85 (56%), Positives = 68/85 (80%)
Frame = +2
Query: 218 PELVIAKQLMRQHLRRLLKTLKPKESQIVQYRFGMYGNKKKTLTEIGEIYGMSNERVRQI 397
P+L +AKQLMR+H+R L+ L PKE +I++ R+G+ N+ K+L EIG I+G+S ERVRQ+
Sbjct: 481 PDLCVAKQLMRRHVRNLISILPPKERRIIRMRYGIENNEPKSLQEIGSIFGLSKERVRQL 540
Query: 398 ENQALNKLKVCLPSQGLAAYRNLLL 472
E++AL+KLK CL SQGL AY +LL+
Sbjct: 541 ESRALHKLKQCLSSQGLGAYADLLV 565
Score = 53.1 bits (126), Expect(2) = 2e-29
Identities = 25/45 (55%), Positives = 37/45 (82%)
Frame = +1
Query: 1 KYARRLCMQEGHPVTDEEIAKRVGITVKKLQKLLVTFRDPVSIYE 135
K A++L +QEGH T+EE+AKRVGITV+KL++L ++ R P+SI +
Sbjct: 415 KKAKKLFIQEGHHPTNEELAKRVGITVEKLERLFMSTRMPLSIQQ 459
>ref|XP_010241845.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X3 [Nelumbo nucifera]
Length = 540
Score = 103 bits (257), Expect(2) = 2e-29
Identities = 48/85 (56%), Positives = 68/85 (80%)
Frame = +2
Query: 218 PELVIAKQLMRQHLRRLLKTLKPKESQIVQYRFGMYGNKKKTLTEIGEIYGMSNERVRQI 397
P+L +AKQLMR+H+R L+ L PKE +I++ R+G+ N+ K+L EIG I+G+S ERVRQ+
Sbjct: 456 PDLCVAKQLMRRHVRNLISILPPKERRIIRMRYGIENNEPKSLQEIGSIFGLSKERVRQL 515
Query: 398 ENQALNKLKVCLPSQGLAAYRNLLL 472
E++AL+KLK CL SQGL AY +LL+
Sbjct: 516 ESRALHKLKQCLSSQGLGAYADLLV 540
Score = 53.1 bits (126), Expect(2) = 2e-29
Identities = 25/45 (55%), Positives = 37/45 (82%)
Frame = +1
Query: 1 KYARRLCMQEGHPVTDEEIAKRVGITVKKLQKLLVTFRDPVSIYE 135
K A++L +QEGH T+EE+AKRVGITV+KL++L ++ R P+SI +
Sbjct: 390 KKAKKLFIQEGHHPTNEELAKRVGITVEKLERLFMSTRMPLSIQQ 434
>ref|XP_010241846.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X4 [Nelumbo nucifera]
Length = 525
Score = 103 bits (257), Expect(2) = 2e-29
Identities = 48/85 (56%), Positives = 68/85 (80%)
Frame = +2
Query: 218 PELVIAKQLMRQHLRRLLKTLKPKESQIVQYRFGMYGNKKKTLTEIGEIYGMSNERVRQI 397
P+L +AKQLMR+H+R L+ L PKE +I++ R+G+ N+ K+L EIG I+G+S ERVRQ+
Sbjct: 441 PDLCVAKQLMRRHVRNLISILPPKERRIIRMRYGIENNEPKSLQEIGSIFGLSKERVRQL 500
Query: 398 ENQALNKLKVCLPSQGLAAYRNLLL 472
E++AL+KLK CL SQGL AY +LL+
Sbjct: 501 ESRALHKLKQCLSSQGLGAYADLLV 525
Score = 53.1 bits (126), Expect(2) = 2e-29
Identities = 25/45 (55%), Positives = 37/45 (82%)
Frame = +1
Query: 1 KYARRLCMQEGHPVTDEEIAKRVGITVKKLQKLLVTFRDPVSIYE 135
K A++L +QEGH T+EE+AKRVGITV+KL++L ++ R P+SI +
Sbjct: 375 KKAKKLFIQEGHHPTNEELAKRVGITVEKLERLFMSTRMPLSIQQ 419
>ref|XP_020261344.1| RNA polymerase sigma factor sigF, chloroplastic [Asparagus
officinalis]
gb|ONK72278.1| uncharacterized protein A4U43_C04F17680 [Asparagus officinalis]
Length = 582
Score = 98.2 bits (243), Expect(2) = 7e-28
Identities = 45/85 (52%), Positives = 68/85 (80%)
Frame = +2
Query: 218 PELVIAKQLMRQHLRRLLKTLKPKESQIVQYRFGMYGNKKKTLTEIGEIYGMSNERVRQI 397
P+L+IAKQ+MR+H+ LL L +E QI+++RFG+ NK K+L++IG +Y +S ERVRQ+
Sbjct: 498 PDLMIAKQMMREHVHNLLGVLNHRERQIIKFRFGIQDNKPKSLSDIGAMYDLSKERVRQL 557
Query: 398 ENQALNKLKVCLPSQGLAAYRNLLL 472
E++AL+KLK CL S+GL AY ++L+
Sbjct: 558 ESRALDKLKGCLSSEGLEAYIDMLI 582
Score = 53.5 bits (127), Expect(2) = 7e-28
Identities = 25/44 (56%), Positives = 35/44 (79%)
Frame = +1
Query: 7 ARRLCMQEGHPVTDEEIAKRVGITVKKLQKLLVTFRDPVSIYER 138
ARRLC+QEGH ++E++K VGI V+KL+ LL+ R+P+SI ER
Sbjct: 434 ARRLCIQEGHIPCNQELSKLVGIRVEKLESLLMNSRNPLSIQER 477
>ref|XP_020085184.1| RNA polymerase sigma factor sigF, chloroplastic isoform X1 [Ananas
comosus]
ref|XP_020085185.1| RNA polymerase sigma factor sigF, chloroplastic isoform X2 [Ananas
comosus]
Length = 573
Score = 105 bits (263), Expect(2) = 1e-27
Identities = 48/85 (56%), Positives = 70/85 (82%)
Frame = +2
Query: 218 PELVIAKQLMRQHLRRLLKTLKPKESQIVQYRFGMYGNKKKTLTEIGEIYGMSNERVRQI 397
P+L I+K +MR+H+R L+ L P+E +I+QYRFG++ ++K+LTEIG +YG+S ERVRQ+
Sbjct: 489 PDLNISKAMMREHVRNFLRILNPRERKIIQYRFGIHDGERKSLTEIGRMYGLSKERVRQL 548
Query: 398 ENQALNKLKVCLPSQGLAAYRNLLL 472
E++AL+KLK LPSQGL AY +LL+
Sbjct: 549 ESRALDKLKESLPSQGLEAYLHLLI 573
Score = 45.1 bits (105), Expect(2) = 1e-27
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = +1
Query: 1 KYARRLCMQEGHPVTDEEIAKRVGITVKKLQKLLVTFRDPVSIYERYLQD 150
K AR+L +Q G+ +EEIAK VGIT +KL+ LL+ R+PV I +R D
Sbjct: 423 KAARKLYIQGGYLPANEEIAKCVGITSQKLESLLLRARNPVPIRKRVWTD 472
>gb|AKC88770.1| sigma factor [Francoa sonchifolia]
Length = 549
Score = 101 bits (251), Expect(2) = 1e-27
Identities = 46/85 (54%), Positives = 67/85 (78%)
Frame = +2
Query: 218 PELVIAKQLMRQHLRRLLKTLKPKESQIVQYRFGMYGNKKKTLTEIGEIYGMSNERVRQI 397
P++ + KQ+MRQH+R LL L PKE +I++ RFG+ K+K+L+EIG ++G+S ERVRQ+
Sbjct: 465 PDISVGKQMMRQHVRNLLSILSPKERRIIRLRFGIEDGKQKSLSEIGAVFGLSKERVRQL 524
Query: 398 ENQALNKLKVCLPSQGLAAYRNLLL 472
E++AL +LK CL SQGL AY +LL+
Sbjct: 525 ESRALYRLKQCLSSQGLGAYTDLLV 549
Score = 49.7 bits (117), Expect(2) = 1e-27
Identities = 25/44 (56%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
Frame = +1
Query: 7 ARRLCMQEG-HPVTDEEIAKRVGITVKKLQKLLVTFRDPVSIYE 135
A++ C+QEG H T EE+A+RVGITV+KL+KLL T R P+S+ +
Sbjct: 400 AKKSCIQEGNHRPTKEELARRVGITVEKLEKLLYTTRMPLSMQQ 443
>ref|XP_015898520.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic
[Ziziphus jujuba]
Length = 567
Score = 99.4 bits (246), Expect(2) = 4e-27
Identities = 49/85 (57%), Positives = 65/85 (76%)
Frame = +2
Query: 218 PELVIAKQLMRQHLRRLLKTLKPKESQIVQYRFGMYGNKKKTLTEIGEIYGMSNERVRQI 397
P++ +AKQLMR+H+R LL L +E QI++ RFG+ G K+L+EIG IYG+S ERVRQI
Sbjct: 483 PDVSVAKQLMRKHVRNLLSILGQRERQIIRLRFGIEGGNHKSLSEIGNIYGLSKERVRQI 542
Query: 398 ENQALNKLKVCLPSQGLAAYRNLLL 472
E++AL KL+ CL S GL AY +LLL
Sbjct: 543 ESRALYKLRQCLGSHGLDAYADLLL 567
Score = 49.7 bits (117), Expect(2) = 4e-27
Identities = 27/49 (55%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Frame = +1
Query: 7 ARRLCMQEG-HPVTDEEIAKRVGITVKKLQKLLVTFRDPVSIYERYLQD 150
A+RL +QEG H + E++AKRVGITV+KL+KLL T R P+S+ +R D
Sbjct: 418 AKRLYIQEGNHYPSKEDLAKRVGITVEKLEKLLFTTRMPLSMQQRVWAD 466
>gb|OVA18028.1| RNA polymerase sigma-70 [Macleaya cordata]
Length = 562
Score = 99.8 bits (247), Expect(2) = 7e-27
Identities = 46/84 (54%), Positives = 64/84 (76%)
Frame = +2
Query: 218 PELVIAKQLMRQHLRRLLKTLKPKESQIVQYRFGMYGNKKKTLTEIGEIYGMSNERVRQI 397
PEL + K LMR+H+R LL L PKE +I++ R+G+ ++K+L +IG ++G+S ERVRQ+
Sbjct: 478 PELCVEKNLMRRHVRNLLSVLPPKERRIIRLRYGIEDGEQKSLAQIGTVFGLSKERVRQL 537
Query: 398 ENQALNKLKVCLPSQGLAAYRNLL 469
EN+AL+KLK CL S GL AY NLL
Sbjct: 538 ENRALDKLKKCLSSHGLEAYTNLL 561
Score = 48.5 bits (114), Expect(2) = 7e-27
Identities = 23/43 (53%), Positives = 34/43 (79%)
Frame = +1
Query: 1 KYARRLCMQEGHPVTDEEIAKRVGITVKKLQKLLVTFRDPVSI 129
K A+ L ++EGH T+EE+AKRVGI+V+KL+ LL + R P+S+
Sbjct: 412 KSAKELFIKEGHQPTNEELAKRVGISVEKLESLLASTRMPLSM 454
>ref|XP_021897328.1| RNA polymerase sigma factor sigF, chloroplastic [Carica papaya]
Length = 557
Score = 101 bits (251), Expect(2) = 7e-27
Identities = 47/85 (55%), Positives = 67/85 (78%)
Frame = +2
Query: 218 PELVIAKQLMRQHLRRLLKTLKPKESQIVQYRFGMYGNKKKTLTEIGEIYGMSNERVRQI 397
P++ + KQLMRQH+R LL L PKE +I++ RFG+ K+K+L+EIGEI+G+S ERVRQ+
Sbjct: 473 PDVSVGKQLMRQHVRNLLGVLSPKERRIIKLRFGIEDGKQKSLSEIGEIFGLSKERVRQL 532
Query: 398 ENQALNKLKVCLPSQGLAAYRNLLL 472
E++AL +LK C+ S GL AY +LL+
Sbjct: 533 ESRALYRLKQCMNSHGLGAYSDLLI 557
Score = 47.0 bits (110), Expect(2) = 7e-27
Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = +1
Query: 7 ARRLCMQEG-HPVTDEEIAKRVGITVKKLQKLLVTFRDPVSIYERYLQD 150
A+R C++EG H T EE+A+RVGITV KL+KLL + R P+S+ + D
Sbjct: 408 AKRSCVREGSHYPTKEELARRVGITVDKLEKLLFSTRMPLSMQQAVWAD 456
>gb|KMZ57346.1| RNA polymerase sigma-70 factor [Zostera marina]
Length = 555
Score = 107 bits (268), Expect(2) = 1e-26
Identities = 50/85 (58%), Positives = 72/85 (84%)
Frame = +2
Query: 218 PELVIAKQLMRQHLRRLLKTLKPKESQIVQYRFGMYGNKKKTLTEIGEIYGMSNERVRQI 397
PEL +AKQ+MR+H R LL+ L +E QI+Q+R+G+ G+++KTLT+IG I+G+S ER+RQ+
Sbjct: 471 PELFVAKQMMRRHTRNLLQVLPLRERQIIQFRYGLDGSRQKTLTDIGIIFGISKERIRQL 530
Query: 398 ENQALNKLKVCLPSQGLAAYRNLLL 472
EN+AL+KLK CL SQGL+AY +LL+
Sbjct: 531 ENRALDKLKDCLQSQGLSAYVDLLV 555
Score = 40.0 bits (92), Expect(2) = 1e-26
Identities = 17/37 (45%), Positives = 29/37 (78%)
Frame = +1
Query: 25 QEGHPVTDEEIAKRVGITVKKLQKLLVTFRDPVSIYE 135
+EG ++E++AKR G+ V+KL++LL+T R PVS+ +
Sbjct: 413 EEGCSPSNEDLAKRTGMKVEKLERLLITTRTPVSLQQ 449
>ref|XP_018812494.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
[Juglans regia]
Length = 206
Score = 102 bits (253), Expect(2) = 1e-26
Identities = 47/85 (55%), Positives = 67/85 (78%)
Frame = +2
Query: 218 PELVIAKQLMRQHLRRLLKTLKPKESQIVQYRFGMYGNKKKTLTEIGEIYGMSNERVRQI 397
PE+ +AK+LMRQH R LL L P+E +I++ RFG+ K+K+L+EIG ++G+S ERVRQ+
Sbjct: 122 PEVSVAKKLMRQHARNLLSILSPRERRIIRLRFGIEDGKQKSLSEIGNMFGLSKERVRQL 181
Query: 398 ENQALNKLKVCLPSQGLAAYRNLLL 472
EN+AL++LK CL S+GL AY LL+
Sbjct: 182 ENRALHRLKQCLSSEGLVAYTELLV 206
Score = 45.4 bits (106), Expect(2) = 1e-26
Identities = 24/42 (57%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Frame = +1
Query: 7 ARRLCMQEG-HPVTDEEIAKRVGITVKKLQKLLVTFRDPVSI 129
++RL +QEG H T+EE+A+ VGITV KL+KLL T R P+S+
Sbjct: 57 SKRLLIQEGNHLPTNEELARHVGITVNKLEKLLCTTRLPLSM 98
>ref|XP_018858062.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X1 [Juglans regia]
Length = 575
Score = 102 bits (253), Expect(2) = 2e-26
Identities = 47/85 (55%), Positives = 67/85 (78%)
Frame = +2
Query: 218 PELVIAKQLMRQHLRRLLKTLKPKESQIVQYRFGMYGNKKKTLTEIGEIYGMSNERVRQI 397
PE+ +AK+LMRQH R LL L P+E +I++ RFG+ K+K+L+EIG ++G+S ERVRQ+
Sbjct: 491 PEVSVAKKLMRQHARNLLSILSPRERRIIRLRFGIEDGKQKSLSEIGNLFGLSKERVRQL 550
Query: 398 ENQALNKLKVCLPSQGLAAYRNLLL 472
EN+AL++LK CL S+GL AY LL+
Sbjct: 551 ENRALHRLKQCLGSEGLVAYTELLV 575
Score = 45.1 bits (105), Expect(2) = 2e-26
Identities = 24/42 (57%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = +1
Query: 7 ARRLCMQEG-HPVTDEEIAKRVGITVKKLQKLLVTFRDPVSI 129
++RL +QEG H T EE+A+ VGITV KL+KLL T R P+S+
Sbjct: 426 SKRLLIQEGNHHPTKEELARHVGITVNKLEKLLYTTRLPLSM 467
>ref|XP_018858063.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X2 [Juglans regia]
Length = 570
Score = 102 bits (253), Expect(2) = 2e-26
Identities = 47/85 (55%), Positives = 67/85 (78%)
Frame = +2
Query: 218 PELVIAKQLMRQHLRRLLKTLKPKESQIVQYRFGMYGNKKKTLTEIGEIYGMSNERVRQI 397
PE+ +AK+LMRQH R LL L P+E +I++ RFG+ K+K+L+EIG ++G+S ERVRQ+
Sbjct: 486 PEVSVAKKLMRQHARNLLSILSPRERRIIRLRFGIEDGKQKSLSEIGNLFGLSKERVRQL 545
Query: 398 ENQALNKLKVCLPSQGLAAYRNLLL 472
EN+AL++LK CL S+GL AY LL+
Sbjct: 546 ENRALHRLKQCLGSEGLVAYTELLV 570
Score = 45.1 bits (105), Expect(2) = 2e-26
Identities = 24/42 (57%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = +1
Query: 7 ARRLCMQEG-HPVTDEEIAKRVGITVKKLQKLLVTFRDPVSI 129
++RL +QEG H T EE+A+ VGITV KL+KLL T R P+S+
Sbjct: 421 SKRLLIQEGNHHPTKEELARHVGITVNKLEKLLYTTRLPLSM 462
>emb|CDP06761.1| unnamed protein product [Coffea canephora]
Length = 556
Score = 98.6 bits (244), Expect(2) = 2e-26
Identities = 47/84 (55%), Positives = 66/84 (78%)
Frame = +2
Query: 221 ELVIAKQLMRQHLRRLLKTLKPKESQIVQYRFGMYGNKKKTLTEIGEIYGMSNERVRQIE 400
+L ++KQLMR H+R LL+ L PKE +I++ RFG+ K+K+L+EIG ++G+S ERVRQ+E
Sbjct: 473 DLSVSKQLMRIHIRNLLRILNPKERKIIRLRFGIEDGKQKSLSEIGAVFGLSKERVRQLE 532
Query: 401 NQALNKLKVCLPSQGLAAYRNLLL 472
+AL KLK CL SQGL AY ++LL
Sbjct: 533 TRALYKLKQCLNSQGLNAYADMLL 556
Score = 48.1 bits (113), Expect(2) = 2e-26
Identities = 26/51 (50%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = +1
Query: 1 KYARRLCMQEG-HPVTDEEIAKRVGITVKKLQKLLVTFRDPVSIYERYLQD 150
K A++LC+Q+G H T EEIA GITV+KL+KLL T R P+S+ + D
Sbjct: 405 KEAKKLCIQQGIHSPTKEEIASCAGITVEKLEKLLFTARMPLSMQQPVWMD 455