BLASTX nr result

ID: Cheilocostus21_contig00023812 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00023812
         (638 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018682032.1| PREDICTED: uncharacterized protein LOC103986...   108   1e-23
ref|XP_009400963.1| PREDICTED: SCAR-like protein 1 [Musa acumina...    64   4e-08

>ref|XP_018682032.1| PREDICTED: uncharacterized protein LOC103986454 [Musa acuminata
            subsp. malaccensis]
          Length = 2125

 Score =  108 bits (270), Expect = 1e-23
 Identities = 67/170 (39%), Positives = 97/170 (57%), Gaps = 2/170 (1%)
 Frame = +3

Query: 3    NMNDLTLGTKDSNVSDSSHIASIAVVLMSEEESFIRQLVDRHSDTEHKNSLVTDLPC-ID 179
            NMN  ++ TKD NVS+S H+    V  MSEE S      D  SDT+H++SL  D  C I+
Sbjct: 1231 NMNGSSVQTKDDNVSESLHLTHNPVEQMSEEMSLRPDTSDHLSDTKHESSLAKDFACYIE 1290

Query: 180  VPEYPSNAPADKLVWSVSQDFGVNSTETILSPVPSFATISGEDCMKKIENTESVGKLSMV 359
            VP++ SN    K   S++QD  V+STETI S V +   I+ +DC+ ++EN  +V  LS  
Sbjct: 1291 VPQHLSNVTIGKRTDSMNQDAEVDSTETIFSSVSAIVAINDKDCLTEMENLIAVENLSYS 1350

Query: 360  GSELGF-DNSCTEIDGFATPNILQPHLQLIYDTEESQESMKTNLADQSHE 506
             SE+GF D      +    P   Q  L+ + + EESQES + + A+++ E
Sbjct: 1351 RSEVGFKDADRVAENNVELPETRQLQLEFLANKEESQESPRVSSAEETQE 1400


>ref|XP_009400963.1| PREDICTED: SCAR-like protein 1 [Musa acuminata subsp. malaccensis]
          Length = 1662

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 54/170 (31%), Positives = 86/170 (50%), Gaps = 3/170 (1%)
 Frame = +3

Query: 6    MNDLTLGTKDSNVSDSSHIASIAVVLMSEEESFIRQLVDRHSDTEHKNSLVTDLPC-IDV 182
            MN  ++G+KD  +S++ +     V L+ EE      + D  S++++++SL       I+V
Sbjct: 781  MNGPSIGSKDDIISENPYPPCNPVELILEEMESGSGMSDYLSESKYESSLTEVFEGHIEV 840

Query: 183  PEYPSNAPADKLVWSVSQDFGVNSTETILSPVPSFATISGEDCMKKIENTESVGKLSMVG 362
              +PSNA  +K      QD  V STE+    + +   I+ +DC +K+EN + V  L  VG
Sbjct: 841  VSHPSNASIEKSPQLTDQDAEVCSTESTPILISAIVPITDKDCTEKLENID-VENLE-VG 898

Query: 363  SELGFDNSCTEIDGFATPNILQPHLQLIYDTEESQESMKTNLAD--QSHE 506
             E   D         A P I QP L+    TEE+ +S K  LA+  +SH+
Sbjct: 899  CE---DTDDMTKQNLAMPEIPQPQLEHFSGTEETLQSPKVKLAEPQESHK 945


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