BLASTX nr result

ID: Cheilocostus21_contig00023442 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00023442
         (759 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283093.1| PREDICTED: eukaryotic translation initiation...    63   2e-07

>ref|XP_002283093.1| PREDICTED: eukaryotic translation initiation factor 3 subunit A
            [Vitis vinifera]
          Length = 977

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 40/102 (39%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
 Frame = -2

Query: 704  RSASLLRPVESLPRPADPASAQPSEPIXXXXXXXXXXXXXXXXXXSKYIPRHLRGRSEAQ 525
            R A L RP E  P+P++P +     P+                   KY+P+  R R E+ 
Sbjct: 855  REALLGRPTEVPPKPSEPPTG--GRPLEPGSAAPAAAAAAAAPASGKYVPKFRRERGESA 912

Query: 524  RAPPPSEPERRGFGPRAAPS-DSERRGSRQDDRPAQ-SDDWR 405
               PP EP+R  +G R AP+ +S+R GSRQDDRP Q SD WR
Sbjct: 913  VQAPPPEPDR--WGSRGAPNPESDRWGSRQDDRPPQPSDRWR 952


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