BLASTX nr result

ID: Cheilocostus21_contig00023236 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00023236
         (660 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009383994.1| PREDICTED: translocase of chloroplast 120, c...    76   2e-12
ref|XP_008788381.1| PREDICTED: translocase of chloroplast 120, c...    65   1e-08

>ref|XP_009383994.1| PREDICTED: translocase of chloroplast 120, chloroplastic-like [Musa
           acuminata subsp. malaccensis]
          Length = 1177

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 72/202 (35%), Positives = 93/202 (46%), Gaps = 8/202 (3%)
 Frame = -1

Query: 582 MERGADSAGCERGVGELDVDVAVESEDPKN----GFDGS---YVDGLGDSGYNEVFEEAL 424
           ME GA +A  E   G++ +++A E+ D +     G DG      DG  D G NEVFEEA+
Sbjct: 1   MENGAGAAKDECRPGQMGLEMAAENGDSQRELAGGADGGPPKSEDGSKDLGENEVFEEAM 60

Query: 423 EPPSPLLQHEVPDSRYAASNGAEVGAVAMQEESLGPTDQTVRDTNGVAVEEQMVDSEKF- 247
           E P    QH V DS         VG V   E  + P D  V + N   +E +MV SE + 
Sbjct: 61  EAP----QHLVHDS--------HVGMVIEPEGVVEPADLRVGEKN---LEVEMVGSEGYI 105

Query: 246 DRTDAVVHHQRLEEQKKVGTERSDNSINPAQPDQSPDEEIVGLDKLNGAVDAEVGGRRYE 67
           D TDA  H QR +EQ                       E+VGL KL+GA   E  G+  +
Sbjct: 106 DSTDAAGHDQRPDEQ-----------------------EMVGLVKLDGAPGVEGNGQE-D 141

Query: 66  EVETAVSDVYVDAQHVDQNSEE 1
            V     D    +QH DQ+SEE
Sbjct: 142 SVSFDKLDASTGSQHTDQSSEE 163


>ref|XP_008788381.1| PREDICTED: translocase of chloroplast 120, chloroplastic [Phoenix
           dactylifera]
          Length = 1170

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 51/147 (34%), Positives = 73/147 (49%), Gaps = 18/147 (12%)
 Frame = -1

Query: 516 VESEDPKNGFDGSYVDGLGDSGYNEVFEEALEPPSPLLQHEVPDSRYAASNGAEVGAVAM 337
           +ES D   G      D   DS  NE+FEEA+EPP P    E  DS+  A NG  +  V  
Sbjct: 22  LESVDGVGGGSAGPKDEARDSEENEIFEEAIEPPQP----ERSDSQDFAVNGGGIAEVPR 77

Query: 336 -----------QEESLGP------TDQTVRDTNGVAVEEQMVDSEKFD-RTDAVVHHQRL 211
                      ++E++ P       D  V D N  A E++ V +E FD  TDA+++ Q  
Sbjct: 78  CGNGDGVGGPDEQETIAPEKYDEAVDMQVNDRN--ADEQETVGTENFDGSTDALLNDQSS 135

Query: 210 EEQKKVGTERSDNSINPAQPDQSPDEE 130
           E+Q+   +E+ D SI+    DQSP+E+
Sbjct: 136 EKQEASFSEKFDESIDVQVNDQSPEEK 162


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