BLASTX nr result

ID: Cheilocostus21_contig00023232 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00023232
         (420 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009382013.1| PREDICTED: uncharacterized protein LOC103970...    68   2e-10
ref|XP_009387012.1| PREDICTED: uncharacterized protein LOC103974...    61   5e-08

>ref|XP_009382013.1| PREDICTED: uncharacterized protein LOC103970099 [Musa acuminata
           subsp. malaccensis]
          Length = 694

 Score = 67.8 bits (164), Expect = 2e-10
 Identities = 46/106 (43%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
 Frame = +2

Query: 116 MPQKSSSPSTNITPMNPTIKPQPVRSLCNQTLTPNTSPPFPQAEPPISAATADVEDEVNL 295
           MP+ SSSP   ITPMNP++KPQP RSL +QTLTPN  PP     PP +AAT  VED V+ 
Sbjct: 1   MPKTSSSPLPTITPMNPSVKPQPPRSLSHQTLTPNPPPP-----PPSAAAT--VEDHVDF 53

Query: 296 -----FDTFXXXXXXXXXXXXXXXXXXXXVETLAHSEAPFSSLLFR 418
                F                         TLA S++PF S L R
Sbjct: 54  LHSPSFHHHHSLLMDDGDDDGGCGPSPRLSGTLAPSQSPFPSHLLR 99


>ref|XP_009387012.1| PREDICTED: uncharacterized protein LOC103974018 [Musa acuminata
           subsp. malaccensis]
          Length = 704

 Score = 60.8 bits (146), Expect = 5e-08
 Identities = 44/111 (39%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
 Frame = +2

Query: 116 MPQKSSSPSTNITPMNPTIKPQPVRSLCNQTLTPNTSPPFPQAEPPISAATADVEDEVNL 295
           MP+ SSSPS  ITPMN  IK Q    L +QTLTPN  PP P   PP+S+A A ++DEV+L
Sbjct: 1   MPKTSSSPSPTITPMNQIIKSQ---LLPHQTLTPNPPPPLP---PPVSSAAA-IDDEVDL 53

Query: 296 FDT----------FXXXXXXXXXXXXXXXXXXXXVETLAHSEAPFSSLLFR 418
             +                               V + +HS +PFSSLL R
Sbjct: 54  LHSSFHHHHHHHHHHQSLLMDDDDDPSSQAPETLVHSHSHSHSPFSSLLLR 104


Top