BLASTX nr result

ID: Cheilocostus21_contig00023130 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00023130
         (416 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009380456.1| PREDICTED: serine hydroxymethyltransferase 3...   107   1e-24
ref|XP_020268921.1| serine hydroxymethyltransferase 3, chloropla...    71   1e-11
gb|ONK66593.1| uncharacterized protein A4U43_C06F9970 [Asparagus...    71   1e-11
ref|XP_020249394.1| serine hydroxymethyltransferase 3, chloropla...    69   7e-11
ref|XP_002519806.1| PREDICTED: serine hydroxymethyltransferase 3...    65   2e-09
ref|XP_020249401.1| serine hydroxymethyltransferase 3, chloropla...    61   4e-08
gb|ABD98048.1| glycine hydroxymethyltransferase, partial [Striga...    58   6e-08
gb|PIN16849.1| Glycine/serine hydroxymethyltransferase [Handroan...    60   1e-07
emb|CDP20520.1| unnamed protein product [Coffea canephora]             59   2e-07
ref|XP_011081701.1| serine hydroxymethyltransferase 3, chloropla...    58   6e-07
gb|PIM98475.1| Glycine/serine hydroxymethyltransferase [Handroan...    55   5e-06
gb|PIN13246.1| Glycine/serine hydroxymethyltransferase [Handroan...    55   7e-06
ref|XP_022865380.1| serine hydroxymethyltransferase 3, chloropla...    54   9e-06

>ref|XP_009380456.1| PREDICTED: serine hydroxymethyltransferase 3, chloroplastic [Musa
           acuminata subsp. malaccensis]
          Length = 528

 Score =  107 bits (268), Expect = 1e-24
 Identities = 52/97 (53%), Positives = 69/97 (71%)
 Frame = -1

Query: 293 MSGYGGLASGSFHKTLGMKDSSLFLKFHATNRPANHISLKNGASCNSLNIQGSLVAGRPS 114
           MS   G+ SGSFH+TLG+K SSL+LK H  NR  ++    N  SC + ++QGSLV GRPS
Sbjct: 1   MSASSGVVSGSFHQTLGIKGSSLYLKHHVANRYPDNTRFNNRRSCKAFSVQGSLVTGRPS 60

Query: 113 AYVTIDDSEIQGRTNDLKDFPLKDADPEVHALIVKEK 3
           + V++ D+E+ G  + LKD+ LK ADPE+HALI KEK
Sbjct: 61  SSVSVSDAEMGGSIDTLKDYSLKVADPELHALIEKEK 97


>ref|XP_020268921.1| serine hydroxymethyltransferase 3, chloroplastic-like [Asparagus
           officinalis]
 ref|XP_020268922.1| serine hydroxymethyltransferase 3, chloroplastic-like [Asparagus
           officinalis]
          Length = 421

 Score = 71.2 bits (173), Expect = 1e-11
 Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
 Frame = -1

Query: 293 MSGYGGLASGSFHKTLGMKDSSLFLKFHATN----RPANHISLKNGASCNSLNIQGSLVA 126
           MS Y     GS H  +      LF      N    R  N +S   G  C + N++G LV 
Sbjct: 1   MSAYSAAVMGSLHHNI------LFTVPRVLNMNEYRNCNQVSFTQG--CRAANVKGILVT 52

Query: 125 GRPSAYVTIDDSEIQGRTNDLKDFPLKDADPEVHALIVKEK 3
           G P++  +  DSE +G  N+L D+PL+DADPE+HALI KEK
Sbjct: 53  GSPASSASASDSESRGNVNNLVDYPLRDADPELHALIEKEK 93


>gb|ONK66593.1| uncharacterized protein A4U43_C06F9970 [Asparagus officinalis]
          Length = 532

 Score = 71.2 bits (173), Expect = 1e-11
 Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
 Frame = -1

Query: 293 MSGYGGLASGSFHKTLGMKDSSLFLKFHATN----RPANHISLKNGASCNSLNIQGSLVA 126
           MS Y     GS H  +      LF      N    R  N +S   G  C + N++G LV 
Sbjct: 1   MSAYSAAVMGSLHHNI------LFTVPRVLNMNEYRNCNQVSFTQG--CRAANVKGILVT 52

Query: 125 GRPSAYVTIDDSEIQGRTNDLKDFPLKDADPEVHALIVKEK 3
           G P++  +  DSE +G  N+L D+PL+DADPE+HALI KEK
Sbjct: 53  GSPASSASASDSESRGNVNNLVDYPLRDADPELHALIEKEK 93


>ref|XP_020249394.1| serine hydroxymethyltransferase 3, chloroplastic isoform X1
           [Asparagus officinalis]
 gb|ONK80741.1| uncharacterized protein A4U43_C01F21200 [Asparagus officinalis]
          Length = 524

 Score = 68.9 bits (167), Expect = 7e-11
 Identities = 38/97 (39%), Positives = 50/97 (51%)
 Frame = -1

Query: 293 MSGYGGLASGSFHKTLGMKDSSLFLKFHATNRPANHISLKNGASCNSLNIQGSLVAGRPS 114
           MS Y G   GS H+T   K+  L  K   TN      S +    C   +++GSLV G PS
Sbjct: 1   MSAYSGAVMGSLHQTFCTKNPGLCSKVFTTNEHRVSFSRR----CRVSSVKGSLVTGTPS 56

Query: 113 AYVTIDDSEIQGRTNDLKDFPLKDADPEVHALIVKEK 3
           +  +  D+      N   D+PL+DADPE+H LI KEK
Sbjct: 57  SSASTQDTVTGENVNSFVDYPLEDADPELHTLIQKEK 93


>ref|XP_002519806.1| PREDICTED: serine hydroxymethyltransferase 3, chloroplastic
           [Ricinus communis]
 ref|XP_015575042.1| PREDICTED: serine hydroxymethyltransferase 3, chloroplastic
           [Ricinus communis]
 gb|EEF42602.1| serine hydroxymethyltransferase, putative [Ricinus communis]
          Length = 527

 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 40/93 (43%), Positives = 53/93 (56%)
 Frame = -1

Query: 281 GGLASGSFHKTLGMKDSSLFLKFHATNRPANHISLKNGASCNSLNIQGSLVAGRPSAYVT 102
           G    GS  + + +K SSL LK        + I L +   C  LNIQGSLVAGRP + V+
Sbjct: 6   GAQVMGSLQQPVWIKGSSLPLKQSNFVGFPHQIKLNSFRPCRYLNIQGSLVAGRPPSSVS 65

Query: 101 IDDSEIQGRTNDLKDFPLKDADPEVHALIVKEK 3
           +   EI+G  +  KD+ L +ADPEV  +I KEK
Sbjct: 66  V--PEIEGDRSSFKDYGLSEADPEVREIIEKEK 96


>ref|XP_020249401.1| serine hydroxymethyltransferase 3, chloroplastic isoform X2
           [Asparagus officinalis]
          Length = 516

 Score = 61.2 bits (147), Expect = 4e-08
 Identities = 34/88 (38%), Positives = 46/88 (52%)
 Frame = -1

Query: 266 GSFHKTLGMKDSSLFLKFHATNRPANHISLKNGASCNSLNIQGSLVAGRPSAYVTIDDSE 87
           GS H+T   K+  L  K   TN      S +    C   +++GSLV G PS+  +  D+ 
Sbjct: 2   GSLHQTFCTKNPGLCSKVFTTNEHRVSFSRR----CRVSSVKGSLVTGTPSSSASTQDTV 57

Query: 86  IQGRTNDLKDFPLKDADPEVHALIVKEK 3
                N   D+PL+DADPE+H LI KEK
Sbjct: 58  TGENVNSFVDYPLEDADPELHTLIQKEK 85


>gb|ABD98048.1| glycine hydroxymethyltransferase, partial [Striga asiatica]
          Length = 125

 Score = 57.8 bits (138), Expect = 6e-08
 Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
 Frame = -1

Query: 263 SFHKTLGMKDSSLFLKFHATNRPANHISLKNGASCNSLNIQGSLVAGRPSAYVTIDD-SE 87
           S  +TLG K S + LK    +R  N++ L +   C S  ++  LV G+P + V++ D  +
Sbjct: 13  SIQQTLGTKASIIPLKSFGISRFPNNVKLGSVKFCRSSQLEEGLVTGKPPSPVSVVDVQK 72

Query: 86  IQGRTNDLKDFPLKDADPEVHALIVKEK 3
           I G  +   D+ L +ADPEVH++I KEK
Sbjct: 73  IGGAGSSFVDYGLSEADPEVHSIIDKEK 100


>gb|PIN16849.1| Glycine/serine hydroxymethyltransferase [Handroanthus
           impetiginosus]
          Length = 529

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
 Frame = -1

Query: 293 MSGYGGLAS-GSFHKTLGMKDSSLFLKFHATNRPANHISLKNGASCNSLNIQGSLVAGRP 117
           M   GG A+  S  + LG K S    K    +   NH++  +   C S  ++GSLV G+P
Sbjct: 1   MRACGGSATMNSIQRPLGAKGSVFPSKKIGVSVFRNHVNWSSVKPCRSSQLEGSLVTGKP 60

Query: 116 SAYVTIDDSEIQGRTNDLKDFPLKDADPEVHALIVKEK 3
           S  V++   EI G  +   D+ L +ADPEV ++I KEK
Sbjct: 61  STSVSVPIPEIGGAGSSFVDYGLSEADPEVRSIIDKEK 98


>emb|CDP20520.1| unnamed protein product [Coffea canephora]
          Length = 530

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 31/88 (35%), Positives = 50/88 (56%)
 Frame = -1

Query: 266 GSFHKTLGMKDSSLFLKFHATNRPANHISLKNGASCNSLNIQGSLVAGRPSAYVTIDDSE 87
           GS  + + +K S+   K    +   N++ L +   C +  +QGSLV GRP + V++   E
Sbjct: 12  GSLQQPIWIKGSAFPCKGFGISGNQNYVKLISVGPCRTSQLQGSLVTGRPPSSVSVPVPE 71

Query: 86  IQGRTNDLKDFPLKDADPEVHALIVKEK 3
           I G  +  +DF L ++DPEV ++I KEK
Sbjct: 72  IGGSGSSFEDFNLSESDPEVQSIIDKEK 99


>ref|XP_011081701.1| serine hydroxymethyltransferase 3, chloroplastic [Sesamum indicum]
 ref|XP_020550423.1| serine hydroxymethyltransferase 3, chloroplastic [Sesamum indicum]
 ref|XP_020550424.1| serine hydroxymethyltransferase 3, chloroplastic [Sesamum indicum]
 ref|XP_020550426.1| serine hydroxymethyltransferase 3, chloroplastic [Sesamum indicum]
          Length = 529

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
 Frame = -1

Query: 293 MSGYGGLAS-GSFHKTLGMKDSSLFLKFHATNRPANHISLKNGASCNSLNIQGSLVAGRP 117
           M   GG A   S  +  G K S    K+       NH+ L +   C S  ++GSL+ G+P
Sbjct: 1   MQACGGSAMMNSIQQPFGPKGSLFPSKWLGITGCPNHVKLSSIKPCRSSQLEGSLITGKP 60

Query: 116 SAYVTIDDSEIQGRTNDLKDFPLKDADPEVHALIVKEK 3
            + V++   EI G  +   D+ L +ADPEV  +I KEK
Sbjct: 61  PSSVSVPIPEIGGTGSSFVDYGLSEADPEVRTIIDKEK 98


>gb|PIM98475.1| Glycine/serine hydroxymethyltransferase [Handroanthus
           impetiginosus]
          Length = 529

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
 Frame = -1

Query: 293 MSGYGGLAS-GSFHKTLGMKDSSLFLKFHATNRPANHISLKNGASCNSLNIQGSLVAGRP 117
           M   GG A+  S  + LG K S    K    +   NH++        S  ++GSLV G+P
Sbjct: 1   MHACGGSATMNSIQRPLGAKGSVFPSKKIGVSVSRNHVNWSLVKPWRSSQLEGSLVTGKP 60

Query: 116 SAYVTIDDSEIQGRTNDLKDFPLKDADPEVHALIVKEK 3
           S  V++   EI G  +   D+ L +ADPEV ++I KEK
Sbjct: 61  STSVSVPIPEIGGAGSSFVDYGLSEADPEVRSIIDKEK 98


>gb|PIN13246.1| Glycine/serine hydroxymethyltransferase [Handroanthus
           impetiginosus]
          Length = 532

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
 Frame = -1

Query: 293 MSGYGGLAS-GSFHKTLGMKDSSLFLKFHATNRPANHISLKNGASCNSLNIQGSLVAGRP 117
           M   GG A   S  +++G + S    K        +H+ L     C S  ++GSLV GRP
Sbjct: 4   MQACGGSAMMNSIRQSIGTERSVFPSKRLRIGACKDHVKLNLVKPCRSSQLEGSLVTGRP 63

Query: 116 SAYVTIDDSEIQGRTNDLKDFPLKDADPEVHALIVKEK 3
            + V++   EI G  +   D+ L +ADPEV ++I KEK
Sbjct: 64  PSSVSVPIPEIGGGGSSFVDYGLSEADPEVRSIIDKEK 101


>ref|XP_022865380.1| serine hydroxymethyltransferase 3, chloroplastic [Olea europaea
           var. sylvestris]
          Length = 529

 Score = 54.3 bits (129), Expect = 9e-06
 Identities = 29/93 (31%), Positives = 47/93 (50%)
 Frame = -1

Query: 281 GGLASGSFHKTLGMKDSSLFLKFHATNRPANHISLKNGASCNSLNIQGSLVAGRPSAYVT 102
           G    GS  + +  K+S   LK       +N +   +   C S  ++G+LV+GRP   V 
Sbjct: 6   GFAVMGSIQQPIWTKESVFPLKGLGVGGCSNLVKFSSVKPCRSSQLEGNLVSGRPPTSVF 65

Query: 101 IDDSEIQGRTNDLKDFPLKDADPEVHALIVKEK 3
           + + E +G  +   D+ L ++DPEV  +I KEK
Sbjct: 66  VPEPETEGAGSSFVDYNLSESDPEVRTIIDKEK 98


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