BLASTX nr result

ID: Cheilocostus21_contig00022753 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00022753
         (513 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH97972.1| Nucleotide-binding, alpha-beta plait [Cynara card...    65   3e-09
ref|XP_010244386.1| PREDICTED: polyadenylate-binding protein 4-l...    63   3e-08
ref|XP_021908544.1| polyadenylate-binding protein 7 [Carica papaya]    57   2e-06
ref|XP_021800179.1| polyadenylate-binding protein 4-like [Prunus...    57   4e-06
gb|OVA19449.1| RNA recognition motif domain [Macleaya cordata]         57   4e-06
gb|KZV58818.1| polyadenylate-binding protein 6-like [Dorcoceras ...    56   5e-06
ref|XP_022746812.1| polyadenylate-binding protein 7-like [Durio ...    56   6e-06

>gb|KVH97972.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
           scolymus]
          Length = 365

 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 50/153 (32%), Positives = 74/153 (48%)
 Frame = -1

Query: 468 SKRFGFVQMAS*EAAQSAIRALSSSILDIFLYVFLLQFASHIVFSINVVTHLT*FFKKIS 289
           SK FGFVQ AS E+A +AI AL  + +D  + + L               H+   FK + 
Sbjct: 72  SKGFGFVQFASEESANNAIDALDGTTIDEKIIIRL---------------HVLMTFKTMV 116

Query: 288 ITCQNLSKFG**T*SF*CLQICVDRLVVFESLYIKILDCRITNNMLLEKFXXXXXXXXXX 109
              ++++KF         L+        F ++Y+K LD   T ++L EKF          
Sbjct: 117 FLSRSVAKF---------LKKSQRNEPEFTNVYVKNLDPDFTESLLREKFSEHGNVTSAV 167

Query: 108 VLKHNEEKS*RFGFVNFKSSEDAKAALEILNGS 10
           ++   + KS  FGFVNF+S + AK A+E LNGS
Sbjct: 168 IMNDADGKSRGFGFVNFESHDSAKKAIEALNGS 200


>ref|XP_010244386.1| PREDICTED: polyadenylate-binding protein 4-like [Nelumbo nucifera]
          Length = 582

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 48/155 (30%), Positives = 74/155 (47%), Gaps = 2/155 (1%)
 Frame = -1

Query: 468 SKRFGFVQMAS*EAAQSAIRALSSSILDIFLYVFLLQFASHIVFSINVVTHLT*FFKKIS 289
           SK FGFVQ  S E+A +AI+AL  ++L                       +++ F KK  
Sbjct: 142 SKGFGFVQFDSEESALAAIKALHDTLLH------------------GKKLYVSKFIKKSD 183

Query: 288 I--TCQNLSKFG**T*SF*CLQICVDRLVVFESLYIKILDCRITNNMLLEKFXXXXXXXX 115
              TC+                      + + +LY+K LD  +T ++LL+KF        
Sbjct: 184 RQNTCE----------------------LKYTNLYVKNLDHDLTEDLLLDKFSDFGKVCN 221

Query: 114 XXVLKHNEEKS*RFGFVNFKSSEDAKAALEILNGS 10
             ++K N+ KS  FGF+NF+S+EDAK A+E +NG+
Sbjct: 222 VVIMKDNQGKSKGFGFINFESAEDAKKAVEAMNGA 256


>ref|XP_021908544.1| polyadenylate-binding protein 7 [Carica papaya]
          Length = 637

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/65 (44%), Positives = 41/65 (63%)
 Frame = -1

Query: 204 FESLYIKILDCRITNNMLLEKFXXXXXXXXXXVLKHNEEKS*RFGFVNFKSSEDAKAALE 25
           + +LY+K LD  +T  +L EKF          + K ++  S  FGFVNF+SS+DAK ALE
Sbjct: 191 YTNLYVKNLDPEVTEELLQEKFSEFGKIVSLVLAKDDDGASRGFGFVNFESSDDAKRALE 250

Query: 24  ILNGS 10
           ++NGS
Sbjct: 251 VMNGS 255


>ref|XP_021800179.1| polyadenylate-binding protein 4-like [Prunus avium]
          Length = 601

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 44/153 (28%), Positives = 70/153 (45%)
 Frame = -1

Query: 468 SKRFGFVQMAS*EAAQSAIRALSSSILDIFLYVFLLQFASHIVFSINVVTHLT*FFKKIS 289
           SK FGFVQ  + ++A +A+ AL+ +++                  +    +++ F KK  
Sbjct: 163 SKGFGFVQFDTEDSAMAAVSALNDTVI------------------MGKNLYVSKFVKKS- 203

Query: 288 ITCQNLSKFG**T*SF*CLQICVDRLVVFESLYIKILDCRITNNMLLEKFXXXXXXXXXX 109
                                  +RL  F +LY+K LD  +T ++L EKF          
Sbjct: 204 -----------------------ERLSEFTNLYVKNLDEDVTEDLLEEKFSLYGRVDSLA 240

Query: 108 VLKHNEEKS*RFGFVNFKSSEDAKAALEILNGS 10
           ++K    KS  FGFVNF+S E+AK A+E +NG+
Sbjct: 241 IMKDANGKSRGFGFVNFESPEEAKKAIEAMNGA 273


>gb|OVA19449.1| RNA recognition motif domain [Macleaya cordata]
          Length = 1226

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 29/65 (44%), Positives = 40/65 (61%)
 Frame = -1

Query: 204 FESLYIKILDCRITNNMLLEKFXXXXXXXXXXVLKHNEEKS*RFGFVNFKSSEDAKAALE 25
           F +L+IK LD  +T  +L EKF          ++K N EKS  FGFVNF +S+ AK A+E
Sbjct: 190 FTNLFIKNLDMDVTEELLKEKFSEFGKITHLAIMKDNSEKSRGFGFVNFDTSDGAKEAME 249

Query: 24  ILNGS 10
            +NG+
Sbjct: 250 AMNGT 254


>gb|KZV58818.1| polyadenylate-binding protein 6-like [Dorcoceras hygrometricum]
          Length = 695

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 32/68 (47%), Positives = 41/68 (60%)
 Frame = -1

Query: 207 VFESLYIKILDCRITNNMLLEKFXXXXXXXXXXVLKHNEEKS*RFGFVNFKSSEDAKAAL 28
           VF +LY+K LD  IT+++L  KF          V+K  + +S  FGFVNF S EDAK A+
Sbjct: 384 VFTNLYVKYLDEDITDDLLKNKFSTSGKIRSAVVMKDEKGRSKGFGFVNFCSHEDAKKAM 443

Query: 27  EILNGSNF 4
           E LNG  F
Sbjct: 444 EALNGELF 451


>ref|XP_022746812.1| polyadenylate-binding protein 7-like [Durio zibethinus]
          Length = 548

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/69 (46%), Positives = 39/69 (56%)
 Frame = -1

Query: 210 VVFESLYIKILDCRITNNMLLEKFXXXXXXXXXXVLKHNEEKS*RFGFVNFKSSEDAKAA 31
           V + +LY+K LD  IT  +L EKF          V K   E S  FGFVNF S +DAK A
Sbjct: 190 VKYTNLYMKNLDPDITEELLQEKFSEFGKIVSLVVAKDENEASRGFGFVNFDSPDDAKRA 249

Query: 30  LEILNGSNF 4
           +E +NGS F
Sbjct: 250 MEAMNGSQF 258


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