BLASTX nr result

ID: Cheilocostus21_contig00022627 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00022627
         (692 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009394539.1| PREDICTED: F-box protein At1g47056 [Musa acu...    62   1e-07
ref|XP_009396269.1| PREDICTED: F-box protein At1g47056-like [Mus...    59   1e-06

>ref|XP_009394539.1| PREDICTED: F-box protein At1g47056 [Musa acuminata subsp.
           malaccensis]
          Length = 542

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 29/48 (60%), Positives = 32/48 (66%)
 Frame = +3

Query: 6   IGAIXXXXXXXXXXXXXWKTRMGYISRRNFVTSALRRWSHGSSNSSHT 149
           IGA+             WKTRMGY + RNFV SALRRWSHGSSNS+HT
Sbjct: 495 IGAVELLPSSSTSRPSPWKTRMGYYAGRNFVASALRRWSHGSSNSNHT 542


>ref|XP_009396269.1| PREDICTED: F-box protein At1g47056-like [Musa acuminata subsp.
           malaccensis]
          Length = 540

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 28/48 (58%), Positives = 31/48 (64%)
 Frame = +3

Query: 6   IGAIXXXXXXXXXXXXXWKTRMGYISRRNFVTSALRRWSHGSSNSSHT 149
           IGA+             WKTRMG  + RNFV SALRRWSHGSSNS+HT
Sbjct: 491 IGAVDLLPSSSSSRSSPWKTRMGLYAGRNFVASALRRWSHGSSNSNHT 538


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