BLASTX nr result

ID: Cheilocostus21_contig00022584 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00022584
         (1009 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009390206.1| PREDICTED: uncharacterized protein LOC103976...    73   9e-11
ref|XP_018678228.1| PREDICTED: double-stranded RNA-binding prote...    63   2e-07
ref|XP_018678229.1| PREDICTED: double-stranded RNA-binding prote...    60   1e-06

>ref|XP_009390206.1| PREDICTED: uncharacterized protein LOC103976647 isoform X1 [Musa
           acuminata subsp. malaccensis]
          Length = 354

 Score = 73.2 bits (178), Expect = 9e-11
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 3/190 (1%)
 Frame = +1

Query: 4   VIEFILGNSDTSTLMIQIIKSKVRLY-TMHNGAGAFASQIQNVVTLAPSTTEKSDKLMGS 180
           VI++ILGN DT  +M QII+SK + Y  +H G G+ +S  +N  T  PS++ + +K++  
Sbjct: 152 VIKYILGNCDTGDIMRQIIESKNKHYAVVHRGKGSCSSLARNAETSGPSSSIQENKML-- 209

Query: 181 QVPLNCNVPCDVPPPWPLCS-NRNTVADESLPAEATRDPTYKQSSDIITGNTSLIL-VET 354
             PL  ++P  V       S   NT A +S+   A  +   KQ S +I    SL     T
Sbjct: 210 -APLFYDIPHAVAYSEAFASVPANTAAADSI-CSAKEEYAGKQCSALIESWNSLSTPTVT 267

Query: 355 VRDGRSASGVSVTDSGAFDIQHPVEVTVKLTPDDSPSSCGNTQGHVPDARKKRHGEKETS 534
           V  G S +G S TD     +  P++   ++ P D P+S  + +  VP + K R  EK   
Sbjct: 268 VIAGGSTNGASGTDFVVPHMLLPIQGKTEV-PSDDPTS--HARDVVPISSKGRSREKNEE 324

Query: 535 NSELKKARVN 564
             +LKKARV+
Sbjct: 325 QCQLKKARVD 334


>ref|XP_018678228.1| PREDICTED: double-stranded RNA-binding protein 4 isoform X2 [Musa
           acuminata subsp. malaccensis]
          Length = 334

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 58/189 (30%), Positives = 92/189 (48%), Gaps = 2/189 (1%)
 Frame = +1

Query: 4   VIEFILGNSDTSTLMIQIIKSKVRLY-TMHNGAGAFASQIQNVVTLAPSTTEKSDKLMGS 180
           VI++ILGN DT  +M QII+SK + Y  +H G G+ +S  +N  T  PS++ + +K++  
Sbjct: 152 VIKYILGNCDTGDIMRQIIESKNKHYAVVHRGKGSCSSLARNAETSGPSSSIQENKML-- 209

Query: 181 QVPLNCNVPCDVPPPWPLCS-NRNTVADESLPAEATRDPTYKQSSDIITGNTSLILVETV 357
             PL  ++P  V       S   NT A +S+ +        K+   +I G          
Sbjct: 210 -APLFYDIPHAVAYSEAFASVPANTAAADSICSA-------KEEYAVIAGG--------- 252

Query: 358 RDGRSASGVSVTDSGAFDIQHPVEVTVKLTPDDSPSSCGNTQGHVPDARKKRHGEKETSN 537
               S +G S TD     +  P++   ++ P D P+S  + +  VP + K R  EK    
Sbjct: 253 ----STNGASGTDFVVPHMLLPIQGKTEV-PSDDPTS--HARDVVPISSKGRSREKNEEQ 305

Query: 538 SELKKARVN 564
            +LKKARV+
Sbjct: 306 CQLKKARVD 314


>ref|XP_018678229.1| PREDICTED: double-stranded RNA-binding protein 4 isoform X3 [Musa
           acuminata subsp. malaccensis]
          Length = 331

 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 1/188 (0%)
 Frame = +1

Query: 4   VIEFILGNSDTSTLMIQIIKSKVRLY-TMHNGAGAFASQIQNVVTLAPSTTEKSDKLMGS 180
           VI++ILGN DT  +M QII+SK + Y  +H G G+ +S  +N  T  PS++ + +K++  
Sbjct: 152 VIKYILGNCDTGDIMRQIIESKNKHYAVVHRGKGSCSSLARNAETSGPSSSIQENKML-- 209

Query: 181 QVPLNCNVPCDVPPPWPLCSNRNTVADESLPAEATRDPTYKQSSDIITGNTSLILVETVR 360
             PL  ++P  V           + A  S+PA                   S+   +   
Sbjct: 210 -APLFYDIPHAV---------AYSEAFASVPANT-------------AAADSICSAKEEY 246

Query: 361 DGRSASGVSVTDSGAFDIQHPVEVTVKLTPDDSPSSCGNTQGHVPDARKKRHGEKETSNS 540
            G S +G S TD     +  P++   ++ P D P+S  + +  VP + K R  EK     
Sbjct: 247 AGGSTNGASGTDFVVPHMLLPIQGKTEV-PSDDPTS--HARDVVPISSKGRSREKNEEQC 303

Query: 541 ELKKARVN 564
           +LKKARV+
Sbjct: 304 QLKKARVD 311


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