BLASTX nr result

ID: Cheilocostus21_contig00022504 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00022504
         (476 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009380882.1| PREDICTED: E3 ubiquitin-protein ligase ATL31...    67   6e-10
ref|XP_009401228.2| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    65   3e-09

>ref|XP_009380882.1| PREDICTED: E3 ubiquitin-protein ligase ATL31-like [Musa acuminata
           subsp. malaccensis]
          Length = 414

 Score = 67.0 bits (162), Expect = 6e-10
 Identities = 45/117 (38%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
 Frame = +3

Query: 144 MDMKSQRSPMDGPPIAAL---FYLLLLTPRCVLAQSPPPD---SXXXXXXXXXSKFSPTM 305
           M MK  R P+ GP +AAL     LLLL P+C LAQ  PP    S          KF+PTM
Sbjct: 1   MAMKFHRRPIVGPLMAALVSLLALLLLPPQCALAQPSPPSDGISDSANNYNYYGKFNPTM 60

Query: 306 AIVIVVMXXXXXXXXXXXXYIRNCGRGDGEFXXXXXXXXXXXXXXXXXQEGLSPEVI 476
           AIVIVVM            Y+RNC   + +                  Q+GLSPEV+
Sbjct: 61  AIVIVVMISLFFLLGFFSLYVRNCSGNNEDLSGSFRRRAAGGAAHSRRQQGLSPEVL 117


>ref|XP_009401228.2| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Musa acuminata
           subsp. malaccensis]
          Length = 451

 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 49/130 (37%), Positives = 57/130 (43%), Gaps = 3/130 (2%)
 Frame = +3

Query: 96  PAPLTQLLSSSQNCVRMDMKSQRSPMDGPPIAALFYLL---LLTPRCVLAQSPPPDSXXX 266
           P  L QL  SS     MD K    P+DG PI AL YLL   LLTPRC  AQ  P  +   
Sbjct: 52  PHRLAQLTGSS-----MDTKRSGRPIDGLPILALLYLLPLLLLTPRCARAQPSP--TFGG 104

Query: 267 XXXXXXSKFSPTMAIVIVVMXXXXXXXXXXXXYIRNCGRGDGEFXXXXXXXXXXXXXXXX 446
                    +PT+AIVIVV+            Y+RNC  G  +F                
Sbjct: 105 SNDNNYGNLNPTLAIVIVVIISTFFVLVFFSLYVRNC-TGQDDFGGSIWRRAAEARSVRP 163

Query: 447 XQEGLSPEVI 476
            Q GLSPEV+
Sbjct: 164 QQRGLSPEVL 173


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