BLASTX nr result

ID: Cheilocostus21_contig00022503 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00022503
         (476 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009380882.1| PREDICTED: E3 ubiquitin-protein ligase ATL31...    66   1e-09
ref|XP_009401228.2| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    62   3e-08

>ref|XP_009380882.1| PREDICTED: E3 ubiquitin-protein ligase ATL31-like [Musa acuminata
           subsp. malaccensis]
          Length = 414

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 47/117 (40%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
 Frame = -3

Query: 333 MDMKHQRSPMNGPPIAAL---FYLLLLTPRCVLAQSPTPD---SXXXXXXXXYGKFSPTM 172
           M MK  R P+ GP +AAL     LLLL P+C LAQ   P    S        YGKF+PTM
Sbjct: 1   MAMKFHRRPIVGPLMAALVSLLALLLLPPQCALAQPSPPSDGISDSANNYNYYGKFNPTM 60

Query: 171 AIVIVVMXXXXXXXXXXXIYIRSCGRGDGEFXXXXXXXXXXXXXXXXRQQGLSPEVI 1
           AIVIVVM           +Y+R+C   + +                 RQQGLSPEV+
Sbjct: 61  AIVIVVMISLFFLLGFFSLYVRNCSGNNEDLSGSFRRRAAGGAAHSRRQQGLSPEVL 117


>ref|XP_009401228.2| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Musa acuminata
           subsp. malaccensis]
          Length = 451

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 49/130 (37%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
 Frame = -3

Query: 381 PAPLTQLLSRSQSNVRMDMKHQRSPMNGPPIAALFYLL---LLTPRCVLAQSPTPDSXXX 211
           P  L QL   S     MD K    P++G PI AL YLL   LLTPRC  AQ P+P +   
Sbjct: 52  PHRLAQLTGSS-----MDTKRSGRPIDGLPILALLYLLPLLLLTPRCARAQ-PSP-TFGG 104

Query: 210 XXXXXYGKFSPTMAIVIVVMXXXXXXXXXXXIYIRSCGRGDGEFXXXXXXXXXXXXXXXX 31
                YG  +PT+AIVIVV+           +Y+R+C  G  +F                
Sbjct: 105 SNDNNYGNLNPTLAIVIVVIISTFFVLVFFSLYVRNC-TGQDDFGGSIWRRAAEARSVRP 163

Query: 30  RQQGLSPEVI 1
           +Q+GLSPEV+
Sbjct: 164 QQRGLSPEVL 173


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