BLASTX nr result

ID: Cheilocostus21_contig00022492 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00022492
         (405 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010925688.1| PREDICTED: transcription factor TCP4-like is...    66   6e-10
ref|XP_010925687.1| PREDICTED: transcription factor TCP4-like is...    66   6e-10

>ref|XP_010925688.1| PREDICTED: transcription factor TCP4-like isoform X2 [Elaeis
           guineensis]
          Length = 564

 Score = 66.2 bits (160), Expect = 6e-10
 Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
 Frame = +1

Query: 76  GDGILCLGWPNLLEAAARGDKQPQPPPRDATSSTAGGGKEVERASWK--LTAAAVGLEDP 249
           GDGIL +GWP+LLEA  R  K P P P D TS  A G +E  R S +  +  AA    + 
Sbjct: 18  GDGILGVGWPSLLEAETR--KAPTPAPPDTTSRAAEGTREAARGSRERGIPLAA----NT 71

Query: 250 KLEQERRKRQKDLDPRRALYLPVP 321
           KL+  +++  KDLDPRR  Y P+P
Sbjct: 72  KLDGRQKRAAKDLDPRRTPYRPIP 95


>ref|XP_010925687.1| PREDICTED: transcription factor TCP4-like isoform X1 [Elaeis
           guineensis]
          Length = 568

 Score = 66.2 bits (160), Expect = 6e-10
 Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
 Frame = +1

Query: 76  GDGILCLGWPNLLEAAARGDKQPQPPPRDATSSTAGGGKEVERASWK--LTAAAVGLEDP 249
           GDGIL +GWP+LLEA  R  K P P P D TS  A G +E  R S +  +  AA    + 
Sbjct: 22  GDGILGVGWPSLLEAETR--KAPTPAPPDTTSRAAEGTREAARGSRERGIPLAA----NT 75

Query: 250 KLEQERRKRQKDLDPRRALYLPVP 321
           KL+  +++  KDLDPRR  Y P+P
Sbjct: 76  KLDGRQKRAAKDLDPRRTPYRPIP 99


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