BLASTX nr result

ID: Cheilocostus21_contig00021977 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00021977
         (704 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009389021.1| PREDICTED: E3 ubiquitin protein ligase RIN3 ...    68   2e-09
ref|XP_009407808.1| PREDICTED: E3 ubiquitin protein ligase RIN3 ...    68   2e-09
ref|XP_008786977.1| PREDICTED: E3 ubiquitin protein ligase RIN2-...    65   1e-08
ref|XP_010919531.1| PREDICTED: E3 ubiquitin protein ligase RIN2 ...    62   2e-07
ref|XP_010919530.1| PREDICTED: E3 ubiquitin protein ligase RIN2 ...    62   2e-07
ref|XP_020263730.1| E3 ubiquitin protein ligase RIN2-like isofor...    59   3e-06
ref|XP_020263731.1| E3 ubiquitin protein ligase RIN3-like isofor...    59   3e-06

>ref|XP_009389021.1| PREDICTED: E3 ubiquitin protein ligase RIN3 [Musa acuminata subsp.
           malaccensis]
          Length = 579

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 35/62 (56%), Positives = 42/62 (67%)
 Frame = -3

Query: 240 VNCLYLSGCSTVVGLIALQWWMASSLDGMEADXXXXXXXXXGSSENTGRALELLLSSHMT 61
           +N LYLS  ST   ++ LQWW  SSLDGM++D         GS E+ GRALELLLSSH+T
Sbjct: 1   MNYLYLSVFSTAASVVGLQWWTVSSLDGMKSDGLITSDGGGGSKESAGRALELLLSSHVT 60

Query: 60  VA 55
           VA
Sbjct: 61  VA 62


>ref|XP_009407808.1| PREDICTED: E3 ubiquitin protein ligase RIN3 isoform X1 [Musa
           acuminata subsp. malaccensis]
          Length = 581

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 37/64 (57%), Positives = 41/64 (64%)
 Frame = -3

Query: 246 MAVNCLYLSGCSTVVGLIALQWWMASSLDGMEADXXXXXXXXXGSSENTGRALELLLSSH 67
           MAVN L LS  ST VGL+ LQWW  SSLD M +D          S E+  RALELLLSSH
Sbjct: 1   MAVNYLCLSAFSTAVGLVGLQWWTVSSLDRMRSDGLFVGDGHGVSLESARRALELLLSSH 60

Query: 66  MTVA 55
           +TVA
Sbjct: 61  VTVA 64


>ref|XP_008786977.1| PREDICTED: E3 ubiquitin protein ligase RIN2-like [Phoenix
           dactylifera]
 ref|XP_008786979.1| PREDICTED: E3 ubiquitin protein ligase RIN2-like [Phoenix
           dactylifera]
          Length = 581

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 34/64 (53%), Positives = 40/64 (62%)
 Frame = -3

Query: 246 MAVNCLYLSGCSTVVGLIALQWWMASSLDGMEADXXXXXXXXXGSSENTGRALELLLSSH 67
           MAVN LY S  STV+ L+ LQWW  S LDGM++D           S   GRALELLL SH
Sbjct: 1   MAVNYLYASAISTVISLVGLQWWTVSLLDGMKSD--GVVDGNEVGSRGVGRALELLLGSH 58

Query: 66  MTVA 55
           +T+A
Sbjct: 59  VTIA 62


>ref|XP_010919531.1| PREDICTED: E3 ubiquitin protein ligase RIN2 isoform X2 [Elaeis
           guineensis]
          Length = 576

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 33/64 (51%), Positives = 39/64 (60%)
 Frame = -3

Query: 246 MAVNCLYLSGCSTVVGLIALQWWMASSLDGMEADXXXXXXXXXGSSENTGRALELLLSSH 67
           MAVN LY S  STV  L+ LQWW  S LDGM++D           S + G ALELLL SH
Sbjct: 1   MAVNYLYASAISTVTNLVGLQWWTVSLLDGMKSD--GVVDGNEVGSRSVGPALELLLDSH 58

Query: 66  MTVA 55
           +T+A
Sbjct: 59  VTIA 62


>ref|XP_010919530.1| PREDICTED: E3 ubiquitin protein ligase RIN2 isoform X1 [Elaeis
           guineensis]
          Length = 578

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 33/64 (51%), Positives = 39/64 (60%)
 Frame = -3

Query: 246 MAVNCLYLSGCSTVVGLIALQWWMASSLDGMEADXXXXXXXXXGSSENTGRALELLLSSH 67
           MAVN LY S  STV  L+ LQWW  S LDGM++D           S + G ALELLL SH
Sbjct: 1   MAVNYLYASAISTVTNLVGLQWWTVSLLDGMKSD--GVVDGNEVGSRSVGPALELLLDSH 58

Query: 66  MTVA 55
           +T+A
Sbjct: 59  VTIA 62


>ref|XP_020263730.1| E3 ubiquitin protein ligase RIN2-like isoform X1 [Asparagus
           officinalis]
          Length = 480

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 32/64 (50%), Positives = 41/64 (64%)
 Frame = -3

Query: 246 MAVNCLYLSGCSTVVGLIALQWWMASSLDGMEADXXXXXXXXXGSSENTGRALELLLSSH 67
           MAVN LYLS  STVV  + LQWW+ S +DG++AD          S +N  R LEL+L S+
Sbjct: 1   MAVNFLYLSAISTVVSFVGLQWWVFSLVDGIKAD--GLIDGGEISLKNVRRVLELVLGSN 58

Query: 66  MTVA 55
           +TVA
Sbjct: 59  VTVA 62


>ref|XP_020263731.1| E3 ubiquitin protein ligase RIN3-like isoform X2 [Asparagus
           officinalis]
 gb|ONK73779.1| uncharacterized protein A4U43_C04F35280 [Asparagus officinalis]
          Length = 582

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 32/64 (50%), Positives = 41/64 (64%)
 Frame = -3

Query: 246 MAVNCLYLSGCSTVVGLIALQWWMASSLDGMEADXXXXXXXXXGSSENTGRALELLLSSH 67
           MAVN LYLS  STVV  + LQWW+ S +DG++AD          S +N  R LEL+L S+
Sbjct: 1   MAVNFLYLSAISTVVSFVGLQWWVFSLVDGIKAD--GLIDGGEISLKNVRRVLELVLGSN 58

Query: 66  MTVA 55
           +TVA
Sbjct: 59  VTVA 62


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