BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00021792
         (564 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZV46967.1| hypothetical protein F511_35508 [Dorcoceras hygro...   266   3e-87
gb|KYP59836.1| Retrovirus-related Pol polyprotein from transposo...   260   2e-84
gb|KYP49204.1| Retrovirus-related Pol polyprotein from transposo...   260   3e-84
gb|OTG28738.1| putative zinc finger, CCHC-type [Helianthus annuus]    280   5e-84
emb|CAE05729.1| OSJNBb0017I01.9 [Oryza sativa Japonica Group]         261   2e-82
gb|AAX96353.1| retrotransposon protein, putative, Ty1-copia sub-...   262   2e-82
gb|ABW81017.1| gag-pol polymerase, partial [Arabidopsis lyrata s...   273   2e-82
gb|PNX67522.1| retrotransposon protein putative Ty1-copia sub-cl...   252   3e-82
emb|CAE05247.2| OSJNBb0115I09.9 [Oryza sativa Japonica Group]         261   3e-82
gb|AAX92916.1| retrotransposon protein, putative, Ty1-copia sub-...   266   3e-82
gb|KYP54754.1| Retrovirus-related Pol polyprotein from transposo...   252   5e-82
gb|ABF97861.1| retrotransposon protein, putative, Ty1-copia subc...   267   6e-82
gb|AAX96510.1| retrotransposon protein, putative, Ty1-copia sub-...   261   6e-81
gb|ABA95860.1| retrotransposon protein, putative, Ty1-copia subc...   247   1e-80
gb|ABA95219.1| retrotransposon protein, putative, Ty1-copia subc...   265   2e-80
gb|ASR75387.1| retrotransposon protein [Oryza barthii]                268   3e-80
gb|PPD96412.1| hypothetical protein GOBAR_DD06575 [Gossypium bar...   269   3e-80
gb|ABA96091.1| retrotransposon protein, putative, Ty1-copia subc...   259   4e-80
gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subc...   267   5e-80
gb|AAM94928.1| putative polyprotein [Oryza sativa Japonica Group]     258   6e-80

>gb|KZV46967.1| hypothetical protein F511_35508 [Dorcoceras hygrometricum]
          Length = 261

 Score =  266 bits (680), Expect = 3e-87
 Identities = 118/188 (62%), Positives = 156/188 (82%)
 Frame = -1

Query: 564 GNKPLGCKWIFKKKLRTDGSVEKYKARLVVQGFRQKAGIDYFDTYAPVARITTIRVILAF 385
           GNKPLGCKWIFK+K+++DG+++KYKARLV++G+RQK G+DYFDTY+PV RIT+IRVIL+ 
Sbjct: 6   GNKPLGCKWIFKRKMKSDGTIDKYKARLVIKGYRQKEGLDYFDTYSPVTRITSIRVILSI 65

Query: 384 ASIHNLLIHQMDVKTAFLHGDLEEEIYMNQPEGYTLPESKNKVCKLVRSLYGLKQAPKQW 205
           A++ N  +H+MDVKTAFL+GDLEEEIYM QP+G++ P  +NKVCKLV+ LYGLKQAPKQW
Sbjct: 66  AALRNHSVHKMDVKTAFLNGDLEEEIYMEQPKGFSAPGQENKVCKLVKFLYGLKQAPKQW 125

Query: 204 HEKFDKVILSFGFQINDSDNCLYIKKMDEKNYIILCLYVDDILILAPNLDLITEIKSFLS 25
           HEKFDK ++  GF++N+ D C+YIK   E  Y+ILC+YVDD+LI+  N  ++   K  LS
Sbjct: 126 HEKFDKTMIESGFKVNECDKCVYIKD-SEDGYVILCIYVDDMLIIGSNDKMVKSTKKMLS 184

Query: 24  DNFNMKDL 1
             F+MKD+
Sbjct: 185 SRFDMKDM 192



 Score = 98.6 bits (244), Expect = 1e-21
 Identities = 48/85 (56%), Positives = 62/85 (72%)
 Frame = -1

Query: 513 DGSVEKYKARLVVQGFRQKAGIDYFDTYAPVARITTIRVILAFASIHNLLIHQMDVKTAF 334
           D  V+  K  L  +   +  G+DYFDTY+PV RIT+IRVILA A++ N  +HQMDVKTAF
Sbjct: 173 DKMVKSTKKMLSSRFDMKDMGLDYFDTYSPVTRITSIRVILAIAALRNHSVHQMDVKTAF 232

Query: 333 LHGDLEEEIYMNQPEGYTLPESKNK 259
           L+GDLEEEIYM QPEG++ P  + +
Sbjct: 233 LNGDLEEEIYMEQPEGFSAPGQETR 257


>gb|KYP59836.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 290

 Score =  260 bits (664), Expect = 2e-84
 Identities = 121/188 (64%), Positives = 156/188 (82%)
 Frame = -1

Query: 564 GNKPLGCKWIFKKKLRTDGSVEKYKARLVVQGFRQKAGIDYFDTYAPVARITTIRVILAF 385
           G KP+GCKWIFK+K   DGS+EKYKARLV +GF QK  ID+FDT+APVARI++IRV++A 
Sbjct: 70  GAKPIGCKWIFKRKYNPDGSIEKYKARLVAKGFTQKQDIDFFDTFAPVARISSIRVLIAL 129

Query: 384 ASIHNLLIHQMDVKTAFLHGDLEEEIYMNQPEGYTLPESKNKVCKLVRSLYGLKQAPKQW 205
           ASIH L+IHQMDVKTAFL+G+LEEEIYM QPEG  +P  +NKVC+L++SLYGLKQAPKQW
Sbjct: 130 ASIHRLVIHQMDVKTAFLNGELEEEIYMTQPEGCEVPGQENKVCRLLKSLYGLKQAPKQW 189

Query: 204 HEKFDKVILSFGFQINDSDNCLYIKKMDEKNYIILCLYVDDILILAPNLDLITEIKSFLS 25
           HEKFD+V+L+ GF  + +D C+Y K MD+ + +I+CLYVDD+LI     D++ + KSFL+
Sbjct: 190 HEKFDQVLLNDGFSSSSADRCVYTKCMDD-DCVIICLYVDDMLIFGTCDDIVFKTKSFLA 248

Query: 24  DNFNMKDL 1
            NF+MKD+
Sbjct: 249 SNFDMKDM 256


>gb|KYP49204.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 313

 Score =  260 bits (665), Expect = 3e-84
 Identities = 120/188 (63%), Positives = 153/188 (81%)
 Frame = -1

Query: 564 GNKPLGCKWIFKKKLRTDGSVEKYKARLVVQGFRQKAGIDYFDTYAPVARITTIRVILAF 385
           G K + CKW+F KKLRTD S++K+KARLVV       G+D+FDTY+PV+++TT RV++A 
Sbjct: 22  GCKSIDCKWVFWKKLRTDASIDKFKARLVVI-----EGVDFFDTYSPVSKVTTTRVLIAL 76

Query: 384 ASIHNLLIHQMDVKTAFLHGDLEEEIYMNQPEGYTLPESKNKVCKLVRSLYGLKQAPKQW 205
             + NL IHQMDVKT+FL+GDLEEEIYMNQPEG+  P  +NKVCKLV+SLYGLKQAPKQW
Sbjct: 77  TCVFNLEIHQMDVKTSFLNGDLEEEIYMNQPEGFIEPGMENKVCKLVKSLYGLKQAPKQW 136

Query: 204 HEKFDKVILSFGFQINDSDNCLYIKKMDEKNYIILCLYVDDILILAPNLDLITEIKSFLS 25
           H+KFD+V+ S+GFQ N+SD C+Y+K+ D+ + +ILCLYVDDILI   NL +I ++KSFLS
Sbjct: 137 HDKFDQVVSSYGFQFNNSDKCVYVKQFDDNSCVILCLYVDDILIFGSNLHVINDVKSFLS 196

Query: 24  DNFNMKDL 1
            NF MKDL
Sbjct: 197 SNFEMKDL 204


>gb|OTG28738.1| putative zinc finger, CCHC-type [Helianthus annuus]
          Length = 1330

 Score =  280 bits (715), Expect = 5e-84
 Identities = 128/188 (68%), Positives = 161/188 (85%)
 Frame = -1

Query: 564  GNKPLGCKWIFKKKLRTDGSVEKYKARLVVQGFRQKAGIDYFDTYAPVARITTIRVILAF 385
            G KPLGCKWIFKKK++ DGS+EK+KARLV+QGFRQK GIDYFDTYAPVARI+TIR+++A 
Sbjct: 859  GCKPLGCKWIFKKKMKVDGSIEKFKARLVIQGFRQKEGIDYFDTYAPVARISTIRLLVAL 918

Query: 384  ASIHNLLIHQMDVKTAFLHGDLEEEIYMNQPEGYTLPESKNKVCKLVRSLYGLKQAPKQW 205
            A+IHNL+IHQMDVKTAFL+GDL+EEIYM QPEG+ +P +++KVCKLV+SLYGLKQAPKQW
Sbjct: 919  AAIHNLVIHQMDVKTAFLNGDLDEEIYMKQPEGFVMPGNEHKVCKLVKSLYGLKQAPKQW 978

Query: 204  HEKFDKVILSFGFQINDSDNCLYIKKMDEKNYIILCLYVDDILILAPNLDLITEIKSFLS 25
            H+KFD+V+LS GF +N +D C+Y K  D +  +I+CLYVDD+LI   + D + + K FLS
Sbjct: 979  HQKFDEVVLSNGFVLNQADKCVYSKFDDSRKGVIICLYVDDMLIFGTDQDQVDKTKKFLS 1038

Query: 24   DNFNMKDL 1
              F+MKDL
Sbjct: 1039 SCFDMKDL 1046


>emb|CAE05729.1| OSJNBb0017I01.9 [Oryza sativa Japonica Group]
          Length = 478

 Score =  261 bits (667), Expect = 2e-82
 Identities = 119/188 (63%), Positives = 152/188 (80%)
 Frame = -1

Query: 564 GNKPLGCKWIFKKKLRTDGSVEKYKARLVVQGFRQKAGIDYFDTYAPVARITTIRVILAF 385
           G KP+GCKW+FKKKLR DG++EKY ARLV +G+ QK G D+FD Y+PVAR+TTIRV+L+ 
Sbjct: 18  GCKPVGCKWVFKKKLRPDGTIEKYNARLVAKGYTQKEGEDFFDNYSPVARLTTIRVLLSL 77

Query: 384 ASIHNLLIHQMDVKTAFLHGDLEEEIYMNQPEGYTLPESKNKVCKLVRSLYGLKQAPKQW 205
           A  H L +HQMDVKT FL+G+L+EEIYM+QP+G+ +   + KVCKL++SLYGLKQAPKQW
Sbjct: 78  AGSHGLFVHQMDVKTVFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQW 137

Query: 204 HEKFDKVILSFGFQINDSDNCLYIKKMDEKNYIILCLYVDDILILAPNLDLITEIKSFLS 25
           HEKFDK + S GF +N++D C+Y +  D    +ILCLYVDDILI   NL++I E+KSFLS
Sbjct: 138 HEKFDKTLTSAGFAVNEADKCVYYRH-DGGEGVILCLYVDDILIFGTNLEVINEVKSFLS 196

Query: 24  DNFNMKDL 1
            NF+MKDL
Sbjct: 197 QNFDMKDL 204


>gb|AAX96353.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group]
 gb|ABA91827.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 527

 Score =  262 bits (670), Expect = 2e-82
 Identities = 120/188 (63%), Positives = 155/188 (82%)
 Frame = -1

Query: 564 GNKPLGCKWIFKKKLRTDGSVEKYKARLVVQGFRQKAGIDYFDTYAPVARITTIRVILAF 385
           G KP+GCKW+FKKKLR DG++EKYKARLV +G+ QK G D+FDTY+PVAR+TTIRV+L+ 
Sbjct: 126 GCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSL 185

Query: 384 ASIHNLLIHQMDVKTAFLHGDLEEEIYMNQPEGYTLPESKNKVCKLVRSLYGLKQAPKQW 205
           A+ H LL+HQMDVKT FL+G+L+EEIYM+QP+G+ +   + KVCKL++SLYGLKQAPKQW
Sbjct: 186 AASHGLLVHQMDVKTTFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQW 245

Query: 204 HEKFDKVILSFGFQINDSDNCLYIKKMDEKNYIILCLYVDDILILAPNLDLITEIKSFLS 25
           HEKFD  + S GF +N++D C+Y +    +  +ILCLYVDDILI   NL++I E+KSFLS
Sbjct: 246 HEKFDITLTSAGFAVNEADKCVYYRHGGGEG-VILCLYVDDILIFGTNLEVINEVKSFLS 304

Query: 24  DNFNMKDL 1
            NF+MKDL
Sbjct: 305 QNFDMKDL 312


>gb|ABW81017.1| gag-pol polymerase, partial [Arabidopsis lyrata subsp. lyrata]
          Length = 1034

 Score =  273 bits (697), Expect = 2e-82
 Identities = 125/188 (66%), Positives = 156/188 (82%)
 Frame = -1

Query: 564  GNKPLGCKWIFKKKLRTDGSVEKYKARLVVQGFRQKAGIDYFDTYAPVARITTIRVILAF 385
            G KPL CKWIFKKK++ DG+++K+KARLVVQGFRQK GIDYFDTYAPV RI++IR+++  
Sbjct: 798  GCKPLACKWIFKKKIKVDGTIDKFKARLVVQGFRQKEGIDYFDTYAPVVRISSIRLLIGL 857

Query: 384  ASIHNLLIHQMDVKTAFLHGDLEEEIYMNQPEGYTLPESKNKVCKLVRSLYGLKQAPKQW 205
            ASIHNL+IHQMDVKTAFL+G LEEE+YM QPEG+ +P +++KVCKLV+SLYGLKQAPKQW
Sbjct: 858  ASIHNLVIHQMDVKTAFLNGVLEEEVYMKQPEGFVMPGNEHKVCKLVKSLYGLKQAPKQW 917

Query: 204  HEKFDKVILSFGFQINDSDNCLYIKKMDEKNYIILCLYVDDILILAPNLDLITEIKSFLS 25
            H++FD+ +LS GF++N SD CLY K  D  N +I+CLYVDD+LI   NL  +   K FLS
Sbjct: 918  HQRFDEAVLSNGFELNQSDKCLYSKFDDSGNGVIICLYVDDMLIFGTNLRQVELTKEFLS 977

Query: 24   DNFNMKDL 1
             NF MKD+
Sbjct: 978  SNFAMKDM 985


>gb|PNX67522.1| retrotransposon protein putative Ty1-copia sub-class, partial
           [Trifolium pratense]
          Length = 232

 Score =  252 bits (644), Expect = 3e-82
 Identities = 115/188 (61%), Positives = 152/188 (80%)
 Frame = -1

Query: 564 GNKPLGCKWIFKKKLRTDGSVEKYKARLVVQGFRQKAGIDYFDTYAPVARITTIRVILAF 385
           G KP+GCKWI KKKL+ DG+V+KYKARLV +GFRQ+  ID+FDT++PV RIT+IRV+++ 
Sbjct: 18  GCKPIGCKWILKKKLKPDGTVDKYKARLVAKGFRQRENIDFFDTFSPVTRITSIRVLISI 77

Query: 384 ASIHNLLIHQMDVKTAFLHGDLEEEIYMNQPEGYTLPESKNKVCKLVRSLYGLKQAPKQW 205
            +I+NL++HQMDVKTAFL+GDLEEEIYM QPEG+ +   + KVCKL +SLYGLKQAPKQW
Sbjct: 78  VAIYNLVVHQMDVKTAFLNGDLEEEIYMEQPEGFVVHGQETKVCKLEKSLYGLKQAPKQW 137

Query: 204 HEKFDKVILSFGFQINDSDNCLYIKKMDEKNYIILCLYVDDILILAPNLDLITEIKSFLS 25
           HEKFD +++S GF++N+SD C+Y K  D     ++CLYVDD+LI   NL  + ++KS L 
Sbjct: 138 HEKFDNLMVSNGFKLNESDKCIYYKS-DNNICTMICLYVDDMLIFGSNLSAVNDVKSLLC 196

Query: 24  DNFNMKDL 1
           + F+MKDL
Sbjct: 197 NIFDMKDL 204


>emb|CAE05247.2| OSJNBb0115I09.9 [Oryza sativa Japonica Group]
          Length = 517

 Score =  261 bits (668), Expect = 3e-82
 Identities = 119/188 (63%), Positives = 155/188 (82%)
 Frame = -1

Query: 564 GNKPLGCKWIFKKKLRTDGSVEKYKARLVVQGFRQKAGIDYFDTYAPVARITTIRVILAF 385
           G KP+GCKW+FKKKLR DG++EKYKARL+ +G+ QK G D+FDTY+PVAR+TTIRV+L+ 
Sbjct: 173 GCKPMGCKWVFKKKLRPDGTIEKYKARLIAKGYTQKEGGDFFDTYSPVARLTTIRVLLSL 232

Query: 384 ASIHNLLIHQMDVKTAFLHGDLEEEIYMNQPEGYTLPESKNKVCKLVRSLYGLKQAPKQW 205
           A+ H LL+HQMDVKT FL+G+L+EEIYM+QP+G+ +   + KVCKL++SLYGLKQA KQW
Sbjct: 233 AASHGLLVHQMDVKTTFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQASKQW 292

Query: 204 HEKFDKVILSFGFQINDSDNCLYIKKMDEKNYIILCLYVDDILILAPNLDLITEIKSFLS 25
           HEKFDK + S GF +N++D C+Y +    +  +ILCLYVDDILI   NL++I E+KSFLS
Sbjct: 293 HEKFDKTLTSAGFAVNEADKCVYYRHGGGEG-VILCLYVDDILIFETNLEVINEVKSFLS 351

Query: 24  DNFNMKDL 1
            NF+MKDL
Sbjct: 352 QNFDMKDL 359


>gb|AAX92916.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group]
          Length = 713

 Score =  266 bits (681), Expect = 3e-82
 Identities = 122/188 (64%), Positives = 157/188 (83%)
 Frame = -1

Query: 564 GNKPLGCKWIFKKKLRTDGSVEKYKARLVVQGFRQKAGIDYFDTYAPVARITTIRVILAF 385
           G KP+GCKW+FKKKLR DG++EKYKARLV +G+ QK G D+FDTY+PVAR+TTIRV+L+ 
Sbjct: 224 GCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSL 283

Query: 384 ASIHNLLIHQMDVKTAFLHGDLEEEIYMNQPEGYTLPESKNKVCKLVRSLYGLKQAPKQW 205
           A+ H LL+HQMDVKTAFL+G+L+EEIYM+QP+G+ +   + KVCKL++SLYGLKQAPKQW
Sbjct: 284 AASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQW 343

Query: 204 HEKFDKVILSFGFQINDSDNCLYIKKMDEKNYIILCLYVDDILILAPNLDLITEIKSFLS 25
           HEKFDK + S GF +N++D C+Y +    +  +ILCLYVDDILI   NL++I E+KSFLS
Sbjct: 344 HEKFDKTLTSAGFVVNEADKCVYYRHGGGEG-VILCLYVDDILIFGTNLEVINEVKSFLS 402

Query: 24  DNFNMKDL 1
            NF+MKDL
Sbjct: 403 QNFDMKDL 410


>gb|KYP54754.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 246

 Score =  252 bits (644), Expect = 5e-82
 Identities = 117/188 (62%), Positives = 151/188 (80%)
 Frame = -1

Query: 564 GNKPLGCKWIFKKKLRTDGSVEKYKARLVVQGFRQKAGIDYFDTYAPVARITTIRVILAF 385
           G K +GCKW+F    RTDG ++K+KAR VV G++Q  G+D+FDTY+PV ++TTIRV++A 
Sbjct: 34  GCKSIGCKWVF----RTDGFIDKFKARPVVIGYKQVEGVDFFDTYSPVCKVTTIRVLIAL 89

Query: 384 ASIHNLLIHQMDVKTAFLHGDLEEEIYMNQPEGYTLPESKNKVCKLVRSLYGLKQAPKQW 205
           A + NL IHQMDVKT FL+ DLEEEIY+NQ EG+  P  +NKVCKLV+SLYGLKQAPKQ 
Sbjct: 90  ACVSNLKIHQMDVKTVFLNSDLEEEIYINQLEGFIEPGMENKVCKLVKSLYGLKQAPKQC 149

Query: 204 HEKFDKVILSFGFQINDSDNCLYIKKMDEKNYIILCLYVDDILILAPNLDLITEIKSFLS 25
           H+KFD+V+ S+GFQ N+SD C+Y+K+ D+ + +ILCLYVDDILI   NL +I ++KSFLS
Sbjct: 150 HDKFDQVVSSYGFQFNNSDKCVYVKQFDDNSCVILCLYVDDILIFGSNLHVINDVKSFLS 209

Query: 24  DNFNMKDL 1
            NF MKDL
Sbjct: 210 SNFEMKDL 217


>gb|ABF97861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 764

 Score =  267 bits (682), Expect = 6e-82
 Identities = 122/188 (64%), Positives = 157/188 (83%)
 Frame = -1

Query: 564 GNKPLGCKWIFKKKLRTDGSVEKYKARLVVQGFRQKAGIDYFDTYAPVARITTIRVILAF 385
           G KP+GCKW+FKKKLR DG++EKYKARLV +G+ QK G D+FDTY+PVAR+TTIRV+L+ 
Sbjct: 255 GCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSL 314

Query: 384 ASIHNLLIHQMDVKTAFLHGDLEEEIYMNQPEGYTLPESKNKVCKLVRSLYGLKQAPKQW 205
           A+ H LL+HQMDVKTAFL+G+L+EEIYM+QP+G+ +   + KVCKL++SLYGLKQAPKQW
Sbjct: 315 AASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQW 374

Query: 204 HEKFDKVILSFGFQINDSDNCLYIKKMDEKNYIILCLYVDDILILAPNLDLITEIKSFLS 25
           HEKFDK + S GF +N++D C+Y +    +  +ILCLYVDDILI   NL++I E+KSFLS
Sbjct: 375 HEKFDKTLTSAGFAVNEADKCVYYRHGGGEG-VILCLYVDDILIFGTNLEVINEVKSFLS 433

Query: 24  DNFNMKDL 1
            NF+MKDL
Sbjct: 434 QNFDMKDL 441


>gb|AAX96510.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group]
 gb|ABA93274.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 643

 Score =  261 bits (668), Expect = 6e-81
 Identities = 123/188 (65%), Positives = 152/188 (80%)
 Frame = -1

Query: 564 GNKPLGCKWIFKKKLRTDGSVEKYKARLVVQGFRQKAGIDYFDTYAPVARITTIRVILAF 385
           G KP+GCKW+FKKKLR DG++EKYKARLV +G+ QK G D+FDTY+PVAR+TTIRV+LA 
Sbjct: 192 GCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLAL 251

Query: 384 ASIHNLLIHQMDVKTAFLHGDLEEEIYMNQPEGYTLPESKNKVCKLVRSLYGLKQAPKQW 205
           A+ H LL+HQMDVKTAFL+G+LEEEIYM+QP+GY L   K  VCKL++SLYGLKQAPKQW
Sbjct: 252 AASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEGQKGMVCKLLKSLYGLKQAPKQW 311

Query: 204 HEKFDKVILSFGFQINDSDNCLYIKKMDEKNYIILCLYVDDILILAPNLDLITEIKSFLS 25
           HEKFD  + S GF +N++D C+Y  +  E   +ILCLYVDDILI   +L++I E+K FLS
Sbjct: 312 HEKFDNTLRSAGFVVNEADECVYY-RYGEGEGVILCLYVDDILIFGTSLNVIEEVKDFLS 370

Query: 24  DNFNMKDL 1
             F MKDL
Sbjct: 371 KCFEMKDL 378


>gb|ABA95860.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 201

 Score =  247 bits (631), Expect = 1e-80
 Identities = 115/183 (62%), Positives = 147/183 (80%)
 Frame = -1

Query: 549 GCKWIFKKKLRTDGSVEKYKARLVVQGFRQKAGIDYFDTYAPVARITTIRVILAFASIHN 370
           GCKW+FKKKLR DG++EKYKARLV +G+ QK G D+FDTY+PVAR+TTIRV+L  A+ + 
Sbjct: 7   GCKWVFKKKLRLDGTIEKYKARLVAKGYTQKEGDDFFDTYSPVARLTTIRVLLVLAASYG 66

Query: 369 LLIHQMDVKTAFLHGDLEEEIYMNQPEGYTLPESKNKVCKLVRSLYGLKQAPKQWHEKFD 190
           LL+HQM VKTAFL+G+LEEEIYM+QP+GY L   +  VCKL++SLYGLKQAPKQWHEKFD
Sbjct: 67  LLVHQMGVKTAFLNGELEEEIYMDQPDGYVLEGQEGMVCKLLKSLYGLKQAPKQWHEKFD 126

Query: 189 KVILSFGFQINDSDNCLYIKKMDEKNYIILCLYVDDILILAPNLDLITEIKSFLSDNFNM 10
             + S GF +N++D C+Y  +  E   +ILCLYVDDILI   +L++I E+K FLS +F +
Sbjct: 127 TTLTSAGFVVNEADKCVYY-RYGEGEGVILCLYVDDILIFGTSLNVIEEVKDFLSKSFEI 185

Query: 9   KDL 1
           KDL
Sbjct: 186 KDL 188


>gb|ABA95219.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 909

 Score =  265 bits (678), Expect = 2e-80
 Identities = 121/188 (64%), Positives = 157/188 (83%)
 Frame = -1

Query: 564  GNKPLGCKWIFKKKLRTDGSVEKYKARLVVQGFRQKAGIDYFDTYAPVARITTIRVILAF 385
            G +P+GCKW+FKKKLR DG++EKYKARLV +G+ QK G D+FDTY+PVAR+TTIRV+L+ 
Sbjct: 510  GCEPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSL 569

Query: 384  ASIHNLLIHQMDVKTAFLHGDLEEEIYMNQPEGYTLPESKNKVCKLVRSLYGLKQAPKQW 205
            A+ H LL+HQMDVKTAFL+G+L+EEIYM+QP+G+ +   + KVCKL++SLYGLKQAPKQW
Sbjct: 570  AASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQW 629

Query: 204  HEKFDKVILSFGFQINDSDNCLYIKKMDEKNYIILCLYVDDILILAPNLDLITEIKSFLS 25
            HEKFDK + S GF +N++D C+Y +    +  +ILCLYVDDILI   NL++I E+KSFLS
Sbjct: 630  HEKFDKTLTSAGFAVNEADKCVYYRHGGGEG-VILCLYVDDILIFGTNLEVINEVKSFLS 688

Query: 24   DNFNMKDL 1
             NF+MKDL
Sbjct: 689  QNFDMKDL 696


>gb|ASR75387.1| retrotransposon protein [Oryza barthii]
          Length = 1200

 Score =  268 bits (686), Expect = 3e-80
 Identities = 123/188 (65%), Positives = 157/188 (83%)
 Frame = -1

Query: 564  GNKPLGCKWIFKKKLRTDGSVEKYKARLVVQGFRQKAGIDYFDTYAPVARITTIRVILAF 385
            G KP+GCKW+FKKKLR DG++EKYKARLV +G+ QK G D+FDTY+PVAR+TTIRV+L+ 
Sbjct: 711  GCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSL 770

Query: 384  ASIHNLLIHQMDVKTAFLHGDLEEEIYMNQPEGYTLPESKNKVCKLVRSLYGLKQAPKQW 205
            A+ H LL+HQMDVKTAFL+G+L+EEIYM+QP+G+ +   + KVCKL++SLYGLKQAPKQW
Sbjct: 771  AASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQW 830

Query: 204  HEKFDKVILSFGFQINDSDNCLYIKKMDEKNYIILCLYVDDILILAPNLDLITEIKSFLS 25
            HEKFDK + S GF +N++D C+Y +    +  +ILCLYVDDILI   NLD+I E+KSFLS
Sbjct: 831  HEKFDKTLTSAGFAVNEADKCVYYRHGGGEG-VILCLYVDDILIFGTNLDVINEVKSFLS 889

Query: 24   DNFNMKDL 1
             NF+MKDL
Sbjct: 890  QNFDMKDL 897


>gb|PPD96412.1| hypothetical protein GOBAR_DD06575 [Gossypium barbadense]
          Length = 1355

 Score =  269 bits (688), Expect = 3e-80
 Identities = 120/188 (63%), Positives = 159/188 (84%)
 Frame = -1

Query: 564  GNKPLGCKWIFKKKLRTDGSVEKYKARLVVQGFRQKAGIDYFDTYAPVARITTIRVILAF 385
            G+KP+GCKWIFKKK++ DG+++K+KARLV +GF Q+ GIDYFDTYAPVARI TIR++++ 
Sbjct: 884  GSKPIGCKWIFKKKMKVDGTIDKFKARLVAKGFTQRQGIDYFDTYAPVARIATIRLLISL 943

Query: 384  ASIHNLLIHQMDVKTAFLHGDLEEEIYMNQPEGYTLPESKNKVCKLVRSLYGLKQAPKQW 205
             SI+NL++HQMDVKTAFL+G+LEEE+YM QPEG+ +P  ++KVCKLV+SLYGLKQAPKQW
Sbjct: 944  TSIYNLVVHQMDVKTAFLNGELEEEVYMEQPEGFVVPGQEHKVCKLVKSLYGLKQAPKQW 1003

Query: 204  HEKFDKVILSFGFQINDSDNCLYIKKMDEKNYIILCLYVDDILILAPNLDLITEIKSFLS 25
            H+KFDKV+L+ G++IN+SD C+Y  K D    +I+CLYVDD+LI   +L+ I   K FLS
Sbjct: 1004 HQKFDKVVLANGYKINESDKCIY-SKFDNGKGVIICLYVDDMLIFGTDLEQIENTKKFLS 1062

Query: 24   DNFNMKDL 1
            +NF MKD+
Sbjct: 1063 NNFAMKDM 1070


>gb|ABA96091.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 622

 Score =  259 bits (661), Expect = 4e-80
 Identities = 120/188 (63%), Positives = 155/188 (82%)
 Frame = -1

Query: 564 GNKPLGCKWIFKKKLRTDGSVEKYKARLVVQGFRQKAGIDYFDTYAPVARITTIRVILAF 385
           G KP+GCKW+FKKKLR DG++EKYKARLV +G+ QK G D+FDTY+PVAR+TTIRV+L+ 
Sbjct: 126 GCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSL 185

Query: 384 ASIHNLLIHQMDVKTAFLHGDLEEEIYMNQPEGYTLPESKNKVCKLVRSLYGLKQAPKQW 205
           A+ H LL+HQMDVKTAFL+ +L+EEIYM+QP+G+ +   + KVCKL++SLYGLKQAPKQ 
Sbjct: 186 AASHGLLVHQMDVKTAFLNRELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQC 245

Query: 204 HEKFDKVILSFGFQINDSDNCLYIKKMDEKNYIILCLYVDDILILAPNLDLITEIKSFLS 25
           HEKFDK + S GF +N++D C+Y +   ++  +ILCLYVDDILI   NL++I E KSFLS
Sbjct: 246 HEKFDKTLTSAGFAVNEADKCVYYRHGGDEG-VILCLYVDDILIFGTNLEVINEAKSFLS 304

Query: 24  DNFNMKDL 1
            NF+MKDL
Sbjct: 305 QNFDMKDL 312


>gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1095

 Score =  267 bits (682), Expect = 5e-80
 Identities = 122/188 (64%), Positives = 157/188 (83%)
 Frame = -1

Query: 564  GNKPLGCKWIFKKKLRTDGSVEKYKARLVVQGFRQKAGIDYFDTYAPVARITTIRVILAF 385
            G KP+GCKW+FKKKLR DG++EKYKARLV +G+ QK G D+FDTY+PVAR+TTIRV+L+ 
Sbjct: 624  GCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSL 683

Query: 384  ASIHNLLIHQMDVKTAFLHGDLEEEIYMNQPEGYTLPESKNKVCKLVRSLYGLKQAPKQW 205
            A+ H LL+HQMDVKTAFL+G+L+EEIYM+QP+G+ +   + KVCKL++SLYGLKQAPKQW
Sbjct: 684  AASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQW 743

Query: 204  HEKFDKVILSFGFQINDSDNCLYIKKMDEKNYIILCLYVDDILILAPNLDLITEIKSFLS 25
            HEKFDK + S GF +N++D C+Y +    +  +ILCLYVDDILI   NL++I E+KSFLS
Sbjct: 744  HEKFDKTLTSAGFAVNEADKCVYYRHGGGEG-VILCLYVDDILIFGTNLEVINEVKSFLS 802

Query: 24   DNFNMKDL 1
             NF+MKDL
Sbjct: 803  QNFDMKDL 810


>gb|AAM94928.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 619

 Score =  258 bits (660), Expect = 6e-80
 Identities = 120/188 (63%), Positives = 152/188 (80%)
 Frame = -1

Query: 564 GNKPLGCKWIFKKKLRTDGSVEKYKARLVVQGFRQKAGIDYFDTYAPVARITTIRVILAF 385
           G KP+GCKW+FKKKLR DG++EKYKARLV +G+ QK G D+FDTY+PVAR+TTIRV+LA 
Sbjct: 364 GCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLAL 423

Query: 384 ASIHNLLIHQMDVKTAFLHGDLEEEIYMNQPEGYTLPESKNKVCKLVRSLYGLKQAPKQW 205
           A+ H LL+HQMDVKTAFL+G+LEEEIYM+QP+GY L   +  VCKL++SLYGLKQAPKQW
Sbjct: 424 AASHGLLVHQMDVKTAFLNGELEEEIYMDQPDGYVLEGQEGMVCKLLKSLYGLKQAPKQW 483

Query: 204 HEKFDKVILSFGFQINDSDNCLYIKKMDEKNYIILCLYVDDILILAPNLDLITEIKSFLS 25
           HEKFD  + S GF +N++D C+Y  +      +ILCLYVDDILI   +L++I E+K +LS
Sbjct: 484 HEKFDTTLTSAGFVVNEADKCVYY-RYGGGEVVILCLYVDDILIFGTSLNVIEEVKDYLS 542

Query: 24  DNFNMKDL 1
            +F MKDL
Sbjct: 543 KSFEMKDL 550