BLASTX nr result

ID: Cheilocostus21_contig00021764 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00021764
         (433 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009398097.1| PREDICTED: trihelix transcription factor GTL...    78   5e-14
ref|XP_009398096.1| PREDICTED: trihelix transcription factor GTL...    78   5e-14
ref|XP_009398095.1| PREDICTED: trihelix transcription factor GTL...    78   5e-14
ref|XP_009398094.1| PREDICTED: trihelix transcription factor GTL...    78   5e-14
ref|XP_009389116.1| PREDICTED: trihelix transcription factor GTL...    70   3e-11
ref|XP_009389115.1| PREDICTED: trihelix transcription factor GTL...    70   3e-11
ref|XP_009398860.1| PREDICTED: trihelix transcription factor GTL...    70   3e-11
ref|XP_009389204.1| PREDICTED: trihelix transcription factor GTL...    66   8e-10
ref|XP_009389196.1| PREDICTED: trihelix transcription factor GTL...    66   8e-10

>ref|XP_009398097.1| PREDICTED: trihelix transcription factor GTL1-like isoform X4 [Musa
           acuminata subsp. malaccensis]
          Length = 652

 Score = 78.2 bits (191), Expect = 5e-14
 Identities = 57/156 (36%), Positives = 65/156 (41%), Gaps = 13/156 (8%)
 Frame = -3

Query: 431 RQDGKSYRFFSELEALYRXXXXXXXXXXXXXXXXXXAI-------------PPVSRPQPI 291
           RQDGKSYRFFS+LEALY                    +             PPVSRPQPI
Sbjct: 59  RQDGKSYRFFSQLEALYSGSSDGGATTSTAKPAPAPPLVAASSAFSAGMAGPPVSRPQPI 118

Query: 290 SLMAPPTMATPTRVVIPEPNFPGGQLGTSNLAAVXXXXXXXXXXXXXXXXXXXXXXXXXX 111
           S  APPTMATPTRVV+P+   PGG  G ++ A                            
Sbjct: 119 SATAPPTMATPTRVVVPDLALPGGLQGLTSSAVA-----GITFSWNSSSSSSSSDSDAEE 173

Query: 110 XXXXXXXXXXXXXXXXXXXGPSRKMMAFFDQLIGQV 3
                              G SRKMMAFFD+L+ QV
Sbjct: 174 TGDADENQEGRKRKHGGGSGASRKMMAFFDRLMNQV 209


>ref|XP_009398096.1| PREDICTED: trihelix transcription factor GTL1-like isoform X3 [Musa
           acuminata subsp. malaccensis]
          Length = 677

 Score = 78.2 bits (191), Expect = 5e-14
 Identities = 57/156 (36%), Positives = 65/156 (41%), Gaps = 13/156 (8%)
 Frame = -3

Query: 431 RQDGKSYRFFSELEALYRXXXXXXXXXXXXXXXXXXAI-------------PPVSRPQPI 291
           RQDGKSYRFFS+LEALY                    +             PPVSRPQPI
Sbjct: 168 RQDGKSYRFFSQLEALYSGSSDGGATTSTAKPAPAPPLVAASSAFSAGMAGPPVSRPQPI 227

Query: 290 SLMAPPTMATPTRVVIPEPNFPGGQLGTSNLAAVXXXXXXXXXXXXXXXXXXXXXXXXXX 111
           S  APPTMATPTRVV+P+   PGG  G ++ A                            
Sbjct: 228 SATAPPTMATPTRVVVPDLALPGGLQGLTSSAVA-----GITFSWNSSSSSSSSDSDAEE 282

Query: 110 XXXXXXXXXXXXXXXXXXXGPSRKMMAFFDQLIGQV 3
                              G SRKMMAFFD+L+ QV
Sbjct: 283 TGDADENQEGRKRKHGGGSGASRKMMAFFDRLMNQV 318


>ref|XP_009398095.1| PREDICTED: trihelix transcription factor GTL1-like isoform X2 [Musa
           acuminata subsp. malaccensis]
          Length = 755

 Score = 78.2 bits (191), Expect = 5e-14
 Identities = 57/156 (36%), Positives = 65/156 (41%), Gaps = 13/156 (8%)
 Frame = -3

Query: 431 RQDGKSYRFFSELEALYRXXXXXXXXXXXXXXXXXXAI-------------PPVSRPQPI 291
           RQDGKSYRFFS+LEALY                    +             PPVSRPQPI
Sbjct: 168 RQDGKSYRFFSQLEALYSGSSDGGATTSTAKPAPAPPLVAASSAFSAGMAGPPVSRPQPI 227

Query: 290 SLMAPPTMATPTRVVIPEPNFPGGQLGTSNLAAVXXXXXXXXXXXXXXXXXXXXXXXXXX 111
           S  APPTMATPTRVV+P+   PGG  G ++ A                            
Sbjct: 228 SATAPPTMATPTRVVVPDLALPGGLQGLTSSAVA-----GITFSWNSSSSSSSSDSDAEE 282

Query: 110 XXXXXXXXXXXXXXXXXXXGPSRKMMAFFDQLIGQV 3
                              G SRKMMAFFD+L+ QV
Sbjct: 283 TGDADENQEGRKRKHGGGSGASRKMMAFFDRLMNQV 318


>ref|XP_009398094.1| PREDICTED: trihelix transcription factor GTL1-like isoform X1 [Musa
           acuminata subsp. malaccensis]
          Length = 761

 Score = 78.2 bits (191), Expect = 5e-14
 Identities = 57/156 (36%), Positives = 65/156 (41%), Gaps = 13/156 (8%)
 Frame = -3

Query: 431 RQDGKSYRFFSELEALYRXXXXXXXXXXXXXXXXXXAI-------------PPVSRPQPI 291
           RQDGKSYRFFS+LEALY                    +             PPVSRPQPI
Sbjct: 168 RQDGKSYRFFSQLEALYSGSSDGGATTSTAKPAPAPPLVAASSAFSAGMAGPPVSRPQPI 227

Query: 290 SLMAPPTMATPTRVVIPEPNFPGGQLGTSNLAAVXXXXXXXXXXXXXXXXXXXXXXXXXX 111
           S  APPTMATPTRVV+P+   PGG  G ++ A                            
Sbjct: 228 SATAPPTMATPTRVVVPDLALPGGLQGLTSSAVA-----GITFSWNSSSSSSSSDSDAEE 282

Query: 110 XXXXXXXXXXXXXXXXXXXGPSRKMMAFFDQLIGQV 3
                              G SRKMMAFFD+L+ QV
Sbjct: 283 TGDADENQEGRKRKHGGGSGASRKMMAFFDRLMNQV 318


>ref|XP_009389116.1| PREDICTED: trihelix transcription factor GTL1 isoform X2 [Musa
           acuminata subsp. malaccensis]
          Length = 642

 Score = 70.5 bits (171), Expect = 3e-11
 Identities = 53/143 (37%), Positives = 61/143 (42%)
 Frame = -3

Query: 431 RQDGKSYRFFSELEALYRXXXXXXXXXXXXXXXXXXAIPPVSRPQPISLMAPPTMATPTR 252
           RQDGKSYRFFS+LEAL+                     PP SR QPIS +AP T+  PTR
Sbjct: 161 RQDGKSYRFFSQLEALHGGSSGGGGGATGMAG------PPASRAQPISAVAPSTLTVPTR 214

Query: 251 VVIPEPNFPGGQLGTSNLAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 72
            V+PEP  P G  G S+ AAV                                       
Sbjct: 215 AVVPEPTPPLGPHGISSSAAV-----GISFSSNSSSSASSESDDEETEEAGESQEGRKRK 269

Query: 71  XXXXXXGPSRKMMAFFDQLIGQV 3
                 G SRKMMAFFD+L+ QV
Sbjct: 270 RGGGDSGSSRKMMAFFDRLMKQV 292


>ref|XP_009389115.1| PREDICTED: trihelix transcription factor GTL1 isoform X1 [Musa
           acuminata subsp. malaccensis]
          Length = 720

 Score = 70.5 bits (171), Expect = 3e-11
 Identities = 53/143 (37%), Positives = 61/143 (42%)
 Frame = -3

Query: 431 RQDGKSYRFFSELEALYRXXXXXXXXXXXXXXXXXXAIPPVSRPQPISLMAPPTMATPTR 252
           RQDGKSYRFFS+LEAL+                     PP SR QPIS +AP T+  PTR
Sbjct: 161 RQDGKSYRFFSQLEALHGGSSGGGGGATGMAG------PPASRAQPISAVAPSTLTVPTR 214

Query: 251 VVIPEPNFPGGQLGTSNLAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 72
            V+PEP  P G  G S+ AAV                                       
Sbjct: 215 AVVPEPTPPLGPHGISSSAAV-----GISFSSNSSSSASSESDDEETEEAGESQEGRKRK 269

Query: 71  XXXXXXGPSRKMMAFFDQLIGQV 3
                 G SRKMMAFFD+L+ QV
Sbjct: 270 RGGGDSGSSRKMMAFFDRLMKQV 292


>ref|XP_009398860.1| PREDICTED: trihelix transcription factor GTL1-like [Musa acuminata
           subsp. malaccensis]
          Length = 676

 Score = 70.1 bits (170), Expect = 3e-11
 Identities = 53/152 (34%), Positives = 61/152 (40%), Gaps = 9/152 (5%)
 Frame = -3

Query: 431 RQDGKSYRFFSELEALYRXXXXXXXXXXXXXXXXXXAI---------PPVSRPQPISLMA 279
           RQDGK YRFFS+LEAL                               PP SR QPIS++A
Sbjct: 145 RQDGKGYRFFSQLEALRSGSSAAVTPAAPVPSTLVATSSAFSASLVGPPPSRAQPISVLA 204

Query: 278 PPTMATPTRVVIPEPNFPGGQLGTSNLAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 99
           PPT+A PTRVV+PE   PGG    S+ AAV                              
Sbjct: 205 PPTLAMPTRVVVPELTPPGGAQRISSSAAVAVSAAAAGIGFSSNSSSSEWFESDDEETDG 264

Query: 98  XXXXXXXXXXXXXXXGPSRKMMAFFDQLIGQV 3
                          GPSRKMM FF +L+ QV
Sbjct: 265 ESQEGRKRKSNGGGSGPSRKMMPFFHRLMKQV 296


>ref|XP_009389204.1| PREDICTED: trihelix transcription factor GTL1-like isoform X2 [Musa
           acuminata subsp. malaccensis]
          Length = 692

 Score = 66.2 bits (160), Expect = 8e-10
 Identities = 42/83 (50%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
 Frame = -3

Query: 431 RQDGKSYRFFSELEALYRXXXXXXXXXXXXXXXXXXAI---PPVSRPQPISLMAPPTMAT 261
           RQDGKSYRFFS+LEAL+                   A    PP  R QPIS +APPTMA 
Sbjct: 175 RQDGKSYRFFSQLEALHSGSAAAFPPPAVAASSAFSAAMAGPPPGRAQPISSVAPPTMAM 234

Query: 260 PTRVVIPEPNFP-GGQLGTSNLA 195
           PTR V+PE   P GG  G S+LA
Sbjct: 235 PTRAVMPEMTPPLGGLQGISSLA 257


>ref|XP_009389196.1| PREDICTED: trihelix transcription factor GTL1-like isoform X1 [Musa
           acuminata subsp. malaccensis]
          Length = 772

 Score = 66.2 bits (160), Expect = 8e-10
 Identities = 42/83 (50%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
 Frame = -3

Query: 431 RQDGKSYRFFSELEALYRXXXXXXXXXXXXXXXXXXAI---PPVSRPQPISLMAPPTMAT 261
           RQDGKSYRFFS+LEAL+                   A    PP  R QPIS +APPTMA 
Sbjct: 175 RQDGKSYRFFSQLEALHSGSAAAFPPPAVAASSAFSAAMAGPPPGRAQPISSVAPPTMAM 234

Query: 260 PTRVVIPEPNFP-GGQLGTSNLA 195
           PTR V+PE   P GG  G S+LA
Sbjct: 235 PTRAVMPEMTPPLGGLQGISSLA 257


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