BLASTX nr result

ID: Cheilocostus21_contig00021603 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00021603
         (539 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010926646.1| PREDICTED: rho GDP-dissociation inhibitor 1 ...    55   6e-06
ref|XP_020088954.1| rho GDP-dissociation inhibitor 1-like [Anana...    55   7e-06
gb|PKA54503.1| Rho GDP-dissociation inhibitor 1 [Apostasia shenz...    55   8e-06

>ref|XP_010926646.1| PREDICTED: rho GDP-dissociation inhibitor 1 [Elaeis guineensis]
 ref|XP_019707295.1| PREDICTED: rho GDP-dissociation inhibitor 1 [Elaeis guineensis]
          Length = 255

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 28/50 (56%), Positives = 34/50 (68%), Gaps = 6/50 (12%)
 Frame = +1

Query: 406 KIDRKFSSASLVSVDG------EDDEDEQRRKMLLGPQIGLKEQLEMDKD 537
           K+ RKFS  S+ S D       EDD+DE +R + LGPQ+ LKEQLEMDKD
Sbjct: 44  KLSRKFSCTSVASTDNDDEIGDEDDDDEDKRAVQLGPQVPLKEQLEMDKD 93


>ref|XP_020088954.1| rho GDP-dissociation inhibitor 1-like [Ananas comosus]
 gb|OAY76049.1| Rho GDP-dissociation inhibitor 1 [Ananas comosus]
          Length = 234

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 28/50 (56%), Positives = 36/50 (72%), Gaps = 6/50 (12%)
 Frame = +1

Query: 406 KIDRKFSSASLVSVD------GEDDEDEQRRKMLLGPQIGLKEQLEMDKD 537
           K+ RKFS AS+ S D       +DD DE+++ +LLGPQ+ LKEQLEMDKD
Sbjct: 23  KLSRKFSCASVSSTDMNDDDGSDDDGDEEKQAVLLGPQVPLKEQLEMDKD 72


>gb|PKA54503.1| Rho GDP-dissociation inhibitor 1 [Apostasia shenzhenica]
          Length = 245

 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 7/51 (13%)
 Frame = +1

Query: 406 KIDRKFSSASLVSVDG-------EDDEDEQRRKMLLGPQIGLKEQLEMDKD 537
           KI RKFSSASL S DG       +DD+D+ +   LLGPQ+ LK+QLE DKD
Sbjct: 34  KITRKFSSASLCSTDGGEDVDDDDDDDDDDKTPGLLGPQLALKDQLEKDKD 84


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